RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 KLHL38Q2WGJ6 581 aa10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 PCID2Q5JVF3 399 aa10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 MEI1Q5TIA1 1274 aa10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 PDSS2Q86YH6 399 aa10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 CNGA4Q8IV77 575 aa10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 LRRC56Q8IYG6 542 aaPredicted RBP10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 KIF2BQ8N4N8 673 aa10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 ZFP62Q8NB50 900 aaPredicted RBP10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 OR52N2Q8NGI0 321 aa10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 TSLPQ969D9 159 aa10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 TM4SF19Q96DZ7 209 aa10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 THAP11Q96EK4 314 aa10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 PEX11GQ96HA9 241 aa10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 ALPK1Q96QP1 1244 aa10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 OR1F2PQ96R84 312 aa10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 TRIM5Q9C035 493 aa10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 LANCL2Q9NS86 450 aa10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 SCN3AQ9NY46 2000 aa10.89□□□□□ -0.67
CLSTN3-209ENST00000539982 AKR1B15C9JRZ8 316 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-209ENST00000539982 E7EVH7 732 aa10.88□□□□□ -0.67
CLSTN3-209ENST00000539982 FCHO1O14526 889 aa10.88□□□□□ -0.67
CLSTN3-209ENST00000539982 NIPSNAP2O75323 286 aa10.88□□□□□ -0.67
CLSTN3-209ENST00000539982 RDH16O75452 317 aa10.88□□□□□ -0.67
CLSTN3-209ENST00000539982 CDC123O75794 336 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-209ENST00000539982 ZNF75DP51815 510 aa10.88□□□□□ -0.67
CLSTN3-209ENST00000539982 DLX5P56178 289 aa10.88□□□□□ -0.67
CLSTN3-209ENST00000539982 KLF1Q13351 362 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-209ENST00000539982 GXYLT1Q4G148 440 aa10.88□□□□□ -0.67
CLSTN3-209ENST00000539982 ACSBG2Q5FVE4 666 aa10.88□□□□□ -0.67
CLSTN3-209ENST00000539982 THEMIS2Q5TEJ8 643 aa10.88□□□□□ -0.67
CLSTN3-209ENST00000539982 PAOXQ6QHF9 649 aa10.88□□□□□ -0.67
CLSTN3-209ENST00000539982 SDCCAG8Q86SQ7 713 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-209ENST00000539982 BIVMQ86UB2 503 aa10.88□□□□□ -0.67
CLSTN3-209ENST00000539982 ARMC10Q8N2F6 343 aa10.88□□□□□ -0.67
CLSTN3-209ENST00000539982 KCT2Q8NC54 265 aa10.88□□□□□ -0.67
CLSTN3-209ENST00000539982 CAMKVQ8NCB2 501 aa10.88□□□□□ -0.67
CLSTN3-209ENST00000539982 FBXO15Q8NCQ5 510 aaPredicted RBP10.88□□□□□ -0.67
CLSTN3-209ENST00000539982 OR5M3Q8NGP4 307 aa10.88□□□□□ -0.67
CLSTN3-209ENST00000539982 PHF3Q92576 2039 aaKnown RBP10.88□□□□□ -0.67
CLSTN3-209ENST00000539982 FAM136AQ96C01 138 aa10.88□□□□□ -0.67
CLSTN3-209ENST00000539982 CCDC138Q96M89 665 aa10.88□□□□□ -0.67
CLSTN3-209ENST00000539982 PANX2Q96RD6 677 aa10.88□□□□□ -0.67
CLSTN3-209ENST00000539982 DEFB127Q9H1M4 99 aa10.88□□□□□ -0.67
CLSTN3-209ENST00000539982 TREX1Q9NSU2 369 aa10.88□□□□□ -0.67
CLSTN3-209ENST00000539982 GALPQ9UBC7 116 aa10.88□□□□□ -0.67
CLSTN3-209ENST00000539982 NAALAD2Q9Y3Q0 740 aa10.88□□□□□ -0.67
CLSTN3-209ENST00000539982 L3MBTL1Q9Y468 752 aa10.88□□□□□ -0.67
CLSTN3-209ENST00000539982 SLC22A7Q9Y694 548 aa10.88□□□□□ -0.67
CLSTN3-209ENST00000539982 DUSP10Q9Y6W6 482 aa10.88□□□□□ -0.67
CLSTN3-209ENST00000539982 FEZF1A0PJY2 475 aa10.87□□□□□ -0.67
CLSTN3-209ENST00000539982 SYF2O95926 243 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-209ENST00000539982 ESR1P03372 595 aa10.87□□□□□ -0.67
CLSTN3-209ENST00000539982 ZFP36L2P47974 494 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-209ENST00000539982 NAP1L1P55209 391 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-209ENST00000539982 ADARP55265 1226 aaKnown RBP10.87□□□□□ -0.67
CLSTN3-209ENST00000539982 MEF2AQ02078 507 aaPredicted RBP10.87□□□□□ -0.67
CLSTN3-209ENST00000539982 KCNJ11Q14654 390 aa10.87□□□□□ -0.67
CLSTN3-209ENST00000539982 SPA17Q15506 151 aa10.87□□□□□ -0.67
CLSTN3-209ENST00000539982 MRNIPQ6NTE8 343 aa10.87□□□□□ -0.67
CLSTN3-209ENST00000539982 ARSKQ6UWY0 536 aa10.87□□□□□ -0.67
CLSTN3-209ENST00000539982 CAMKMTQ7Z624 323 aa10.87□□□□□ -0.67
CLSTN3-209ENST00000539982 ZZZ3Q8IYH5 903 aa10.87□□□□□ -0.67
CLSTN3-209ENST00000539982 OR10Q1Q8NGQ4 319 aa10.87□□□□□ -0.67
CLSTN3-209ENST00000539982 ZCCHC10Q8TBK6 192 aa10.87□□□□□ -0.67
CLSTN3-209ENST00000539982 SLC13A3Q8WWT9 602 aa10.87□□□□□ -0.67
CLSTN3-209ENST00000539982 LPGAT1Q92604 370 aa10.87□□□□□ -0.67
CLSTN3-209ENST00000539982 TBC1D20Q96BZ9 403 aa10.87□□□□□ -0.67
CLSTN3-209ENST00000539982 MBD6Q96DN6 1003 aa10.87□□□□□ -0.67
CLSTN3-209ENST00000539982 RMND5BQ96G75 393 aaPredicted RBP10.87□□□□□ -0.67
CLSTN3-209ENST00000539982 TCF12Q99081 682 aa10.87□□□□□ -0.67
CLSTN3-209ENST00000539982 RBCK1Q9BYM8 510 aa10.87□□□□□ -0.67
CLSTN3-209ENST00000539982 DEFB126Q9BYW3 111 aa10.87□□□□□ -0.67
CLSTN3-209ENST00000539982 FAM129AQ9BZQ8 928 aa10.87□□□□□ -0.67
CLSTN3-209ENST00000539982 SLC6A16Q9GZN6 736 aa10.87□□□□□ -0.67
CLSTN3-209ENST00000539982 CLEC4MQ9H2X3 399 aaPredicted RBP10.87□□□□□ -0.67
CLSTN3-209ENST00000539982 RASSF1Q9NS23 344 aa10.87□□□□□ -0.67
CLSTN3-209ENST00000539982 PLEKHA6Q9Y2H5 1048 aa10.87□□□□□ -0.67
CLSTN3-209ENST00000539982 NPIPA2E9PIF3 369 aa10.86□□□□□ -0.67
CLSTN3-209ENST00000539982 NPIPA3F8WFD2 350 aa10.86□□□□□ -0.67
CLSTN3-209ENST00000539982 PFDN6O15212 129 aa10.86□□□□□ -0.67
CLSTN3-209ENST00000539982 APRTP07741 180 aa10.86□□□□□ -0.67
CLSTN3-209ENST00000539982 FHP07954 510 aa10.86□□□□□ -0.67
CLSTN3-209ENST00000539982 JAK1P23458 1154 aa10.86□□□□□ -0.67
CLSTN3-209ENST00000539982 ACVR2AP27037 513 aa10.86□□□□□ -0.67
CLSTN3-209ENST00000539982 NMBRP28336 390 aa10.86□□□□□ -0.67
CLSTN3-209ENST00000539982 CDC25BP30305 580 aa10.86□□□□□ -0.67
CLSTN3-209ENST00000539982 NR0B1P51843 470 aaKnown RBP10.86□□□□□ -0.67
CLSTN3-209ENST00000539982 DGKQP52824 942 aa10.86□□□□□ -0.67
CLSTN3-209ENST00000539982 TYSND1Q2T9J0 566 aa10.86□□□□□ -0.67
CLSTN3-209ENST00000539982 RNF187Q5TA31 235 aaPredicted RBP10.86□□□□□ -0.67
CLSTN3-209ENST00000539982 MDGA2Q7Z553 956 aa10.86□□□□□ -0.67
CLSTN3-209ENST00000539982 ASPGQ86U10 573 aa10.86□□□□□ -0.67
CLSTN3-209ENST00000539982 SLC26A11Q86WA9 606 aa10.86□□□□□ -0.67
CLSTN3-209ENST00000539982 REXO1L1PQ8IX06 675 aa10.86□□□□□ -0.67
CLSTN3-209ENST00000539982 CCDC170Q8IYT3 715 aa10.86□□□□□ -0.67
CLSTN3-209ENST00000539982 CYP4X1Q8N118 509 aa10.86□□□□□ -0.67
CLSTN3-209ENST00000539982 OTUD6BQ8N6M0 293 aa10.86□□□□□ -0.67
CLSTN3-209ENST00000539982 NFAM1Q8NET5 270 aaPredicted RBP10.86□□□□□ -0.67
CLSTN3-209ENST00000539982 OR5T3Q8NGG3 340 aa10.86□□□□□ -0.67
CLSTN3-209ENST00000539982 ASB11Q8WXH4 323 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms