RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 FTSJ1Q9UET6 329 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 SERTAD3Q9UJW9 196 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 SRPK3Q9UPE1 567 aa11.29□□□□□ -0.6
VTN-202ENST00000539746 MRPS33Q9Y291 106 aaKnown RBP11.29□□□□□ -0.6
VTN-202ENST00000539746 MN1Q10571 1320 aaPredicted RBP11.29□□□□□ -0.6
VTN-202ENST00000539746 TECTAO75443 2155 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 PRUNE2Q8WUY3 3088 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 IGHV1OR21-1A0A087WYE8 117 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 A0A1W2PP18 115 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 CAPN14A8MX76 684 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 H0YHG0 523 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 PPP6CO00743 305 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 GMNNO75496 209 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 CIB2O75838 187 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 SLITRK5O94991 958 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 SOX30O94993 753 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 LDOC1O95751 146 aaPredicted RBP11.28□□□□□ -0.6
VTN-202ENST00000539746 EML2O95834 649 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 SERPIND1P05546 499 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 PIM1P11309 404 aaPredicted RBP11.28□□□□□ -0.6
VTN-202ENST00000539746 COX4I1P13073 169 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 CKMT2P17540 419 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 IL10P22301 178 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 PIK3R1P27986 724 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 S100A3P33764 101 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 MAGEA8P43361 318 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 ANXA11P50995 505 aaKnown RBP11.28□□□□□ -0.6
VTN-202ENST00000539746 POLR2JP52435 117 aaKnown RBP11.28□□□□□ -0.6
VTN-202ENST00000539746 HNRNPFP52597 415 aaKnown RBP11.28□□□□□ -0.6
VTN-202ENST00000539746 ARSFP54793 590 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 MAZP56270 477 aaKnown RBP11.28□□□□□ -0.6
VTN-202ENST00000539746 RPS13P62277 151 aaKnown RBP11.28□□□□□ -0.6
VTN-202ENST00000539746 SRSF5Q13243 272 aaKnown RBP11.28□□□□□ -0.6
VTN-202ENST00000539746 TUBB3Q13509 450 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 RCAN2Q14206 197 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 GRM7Q14831 915 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 ADPRMQ3LIE5 342 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 PLA2G2CQ5R387 149 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 TMEM71Q6P5X7 295 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 TLDC1Q6P9B6 456 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 BHLHB9Q6PI77 547 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 LAYNQ6UX15 382 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 SLC35F3Q8IY50 421 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.28□□□□□ -0.6
VTN-202ENST00000539746 ZCCHC7Q8N3Z6 543 aaKnown RBP11.28□□□□□ -0.6
VTN-202ENST00000539746 SLC25A45Q8N413 288 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 DCBLD1Q8N8Z6 715 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 OR4D9Q8NGE8 314 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 ZFP28Q8NHY6 868 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 CHTF18Q8WVB6 975 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 NCSTNQ92542 709 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 ITCHQ96J02 903 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 FCRL1Q96LA6 429 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 BTBD10Q9BSF8 475 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 LRMDAQ9H2I8 198 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 ARRDC1-AS1Q9H2J1 176 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 RAD21L1Q9H4I0 556 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 MYNNQ9NPC7 610 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 TMEM9BQ9NQ34 198 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 PNMA8BQ9ULN7 279 aaPredicted RBP11.28□□□□□ -0.6
VTN-202ENST00000539746 PRPF19Q9UMS4 504 aaKnown RBP11.28□□□□□ -0.6
VTN-202ENST00000539746 GPR45Q9Y5Y3 372 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 SLC22A7Q9Y694 548 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 RNF215Q9Y6U7 377 aa11.28□□□□□ -0.6
VTN-202ENST00000539746 B3GALT2O43825 422 aa11.27□□□□□ -0.61
VTN-202ENST00000539746 NRP2O60462 931 aa11.27□□□□□ -0.61
VTN-202ENST00000539746 UBOX5O94941 541 aa11.27□□□□□ -0.61
VTN-202ENST00000539746 LMNAP02545 664 aaKnown RBP11.27□□□□□ -0.61
VTN-202ENST00000539746 CD63P08962 238 aa11.27□□□□□ -0.61
VTN-202ENST00000539746 BCKDHAP12694 445 aa11.27□□□□□ -0.61
VTN-202ENST00000539746 MAGP20916 626 aa11.27□□□□□ -0.61
VTN-202ENST00000539746 KIR3DL1P43629 444 aa11.27□□□□□ -0.61
VTN-202ENST00000539746 AVPR1BP47901 424 aa11.27□□□□□ -0.61
VTN-202ENST00000539746 MTTPP55157 894 aa11.27□□□□□ -0.61
VTN-202ENST00000539746 HMGCS1Q01581 520 aa11.27□□□□□ -0.61
VTN-202ENST00000539746 CSRP2Q16527 193 aa11.27□□□□□ -0.61
VTN-202ENST00000539746 KIAA1614Q5VZ46 1190 aa11.27□□□□□ -0.61
VTN-202ENST00000539746 OR4C11Q6IEV9 310 aa11.27□□□□□ -0.61
VTN-202ENST00000539746 COMMD6Q7Z4G1 85 aa11.27□□□□□ -0.61
VTN-202ENST00000539746 SPRED1Q7Z699 444 aa11.27□□□□□ -0.61
VTN-202ENST00000539746 GPR180Q86V85 440 aa11.27□□□□□ -0.61
VTN-202ENST00000539746 LIX1Q8N485 282 aa11.27□□□□□ -0.61
VTN-202ENST00000539746 C2orf73Q8N5S3 287 aaPredicted RBP11.27□□□□□ -0.61
VTN-202ENST00000539746 MTFMTQ96DP5 389 aaKnown RBP11.27□□□□□ -0.61
VTN-202ENST00000539746 SPDL1Q96EA4 605 aa11.27□□□□□ -0.61
VTN-202ENST00000539746 APOLD1Q96LR9 279 aa11.27□□□□□ -0.61
VTN-202ENST00000539746 TMEM74Q96NL1 305 aa11.27□□□□□ -0.61
VTN-202ENST00000539746 SERINC2Q96SA4 455 aa11.27□□□□□ -0.61
VTN-202ENST00000539746 C17orf62Q9BQA9 187 aa11.27□□□□□ -0.61
VTN-202ENST00000539746 ZNF385DQ9H6B1 395 aa11.27□□□□□ -0.61
VTN-202ENST00000539746 DDX31Q9H8H2 851 aaKnown RBP11.27□□□□□ -0.61
VTN-202ENST00000539746 ANKHQ9HCJ1 492 aa11.27□□□□□ -0.61
VTN-202ENST00000539746 ENAMQ9NRM1 1142 aa11.27□□□□□ -0.61
VTN-202ENST00000539746 IRAK4Q9NWZ3 460 aa11.27□□□□□ -0.61
VTN-202ENST00000539746 UCKL1Q9NWZ5 548 aa11.27□□□□□ -0.61
VTN-202ENST00000539746 SPHK1Q9NYA1 384 aa11.27□□□□□ -0.61
VTN-202ENST00000539746 CCDC167Q9P0B6 97 aa11.27□□□□□ -0.61
VTN-202ENST00000539746 CIDEBQ9UHD4 219 aa11.27□□□□□ -0.61
VTN-202ENST00000539746 CCL27Q9Y4X3 112 aa11.27□□□□□ -0.61
VTN-202ENST00000539746 POLR3HQ9Y535 204 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms