RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 TXLNGQ9NUQ3 528 aa15.44■□□□□ 0.06
TRAF3-204ENST00000539721 CCDC167Q9P0B6 97 aa15.44■□□□□ 0.06
TRAF3-204ENST00000539721 RASSF9O75901 435 aa15.43■□□□□ 0.06
TRAF3-204ENST00000539721 ESRRAP11474 423 aaPredicted RBP15.43■□□□□ 0.06
TRAF3-204ENST00000539721 CKMT1AP12532 417 aa15.43■□□□□ 0.06
TRAF3-204ENST00000539721 COX4I1P13073 169 aa15.43■□□□□ 0.06
TRAF3-204ENST00000539721 PRDX6P30041 224 aa15.43■□□□□ 0.06
TRAF3-204ENST00000539721 TIA1P31483 386 aaKnown RBP eCLIP15.43■□□□□ 0.06
TRAF3-204ENST00000539721 CSF2RBP32927 897 aa15.43■□□□□ 0.06
TRAF3-204ENST00000539721 SPEM2Q0P670 501 aa15.43■□□□□ 0.06
TRAF3-204ENST00000539721 SPRED3Q2MJR0 410 aa15.43■□□□□ 0.06
TRAF3-204ENST00000539721 TOR1AIP1Q5JTV8 583 aa15.43■□□□□ 0.06
TRAF3-204ENST00000539721 USP53Q70EK8 1073 aa15.43■□□□□ 0.06
TRAF3-204ENST00000539721 COMMD6Q7Z4G1 85 aa15.43■□□□□ 0.06
TRAF3-204ENST00000539721 VN1R4Q7Z5H5 301 aa15.43■□□□□ 0.06
TRAF3-204ENST00000539721 RERGQ96A58 199 aaPredicted RBP15.43■□□□□ 0.06
TRAF3-204ENST00000539721 MACROD1Q9BQ69 325 aa15.43■□□□□ 0.06
TRAF3-204ENST00000539721 CCDC3Q9BQI4 270 aa15.43■□□□□ 0.06
TRAF3-204ENST00000539721 ZIM2Q9NZV7 527 aa15.43■□□□□ 0.06
TRAF3-204ENST00000539721 RP1P56715 2156 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 LOC100653049A0A140TA62 436 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 LRIT2A6NDA9 550 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 FLRT2O43155 660 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 PCDH7O60245 1069 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 SLC22A3O75751 556 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 KRT34O76011 436 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 SLC35G6P0C7Q6 338 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 T-ENOLP0DO92 83 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 CD1EP15812 388 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 SDC1P18827 310 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 CALB2P22676 271 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 HNRNPH1P31943 449 aaKnown RBP15.42■□□□□ 0.06
TRAF3-204ENST00000539721 ACADVLP49748 655 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 UFM1P61960 85 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 RAE1P78406 368 aaKnown RBP15.42■□□□□ 0.06
TRAF3-204ENST00000539721 CFHR1Q03591 330 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 RGS1Q08116 209 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 PTGR1Q14914 329 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 HERC3Q15034 1050 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 MAPRE2Q15555 327 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 TMEM35AQ53FP2 167 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 LACTB2Q53H82 288 aaPredicted RBP15.42■□□□□ 0.06
TRAF3-204ENST00000539721 FRMPD2BQ6IN97 320 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 WDR74Q6RFH5 385 aaPredicted RBP15.42■□□□□ 0.06
TRAF3-204ENST00000539721 SNX32Q86XE0 403 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 CLHC1Q8NHS4 586 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 RP9Q8TA86 221 aaKnown RBP15.42■□□□□ 0.06
TRAF3-204ENST00000539721 WDR48Q8TAF3 677 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 IFI44Q8TCB0 444 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 RGMAQ96B86 450 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 C11orf24Q96F05 449 aaPredicted RBP15.42■□□□□ 0.06
TRAF3-204ENST00000539721 TCTN2Q96GX1 697 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 SLC45A3Q96JT2 553 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 EDEM2Q9BV94 578 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 REXO4Q9GZR2 422 aaKnown RBP15.42■□□□□ 0.06
TRAF3-204ENST00000539721 FAM60AQ9NP50 221 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 FAM86C1Q9NVL1 165 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 SOHLH2Q9NX45 425 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 SIRT5Q9NXA8 310 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 NCDNQ9UBB6 729 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 BAIAP2L1Q9UHR4 511 aa15.42■□□□□ 0.06
TRAF3-204ENST00000539721 MN1Q10571 1320 aaPredicted RBP15.42■□□□□ 0.06
TRAF3-204ENST00000539721 IGHV5-51A0A0C4DH38 117 aa15.41■□□□□ 0.06
TRAF3-204ENST00000539721 GNG14A0A1W2PPG7 69 aa15.41■□□□□ 0.06
TRAF3-204ENST00000539721 PLPP1O14494 284 aa15.41■□□□□ 0.06
TRAF3-204ENST00000539721 ATP5HO75947 161 aa15.41■□□□□ 0.06
TRAF3-204ENST00000539721 LDOC1O95751 146 aaPredicted RBP15.41■□□□□ 0.06
TRAF3-204ENST00000539721 C9P02748 559 aa15.41■□□□□ 0.06
TRAF3-204ENST00000539721 ANXA4P09525 319 aaPredicted RBP15.41■□□□□ 0.06
TRAF3-204ENST00000539721 THRAP10827 490 aa15.41■□□□□ 0.06
TRAF3-204ENST00000539721 MLLT3P42568 568 aaPredicted RBP15.41■□□□□ 0.06
TRAF3-204ENST00000539721 CPA2P48052 419 aa15.41■□□□□ 0.06
TRAF3-204ENST00000539721 STXBP1P61764 594 aaKnown RBP15.41■□□□□ 0.06
TRAF3-204ENST00000539721 HYAL2Q12891 473 aa15.41■□□□□ 0.06
TRAF3-204ENST00000539721 PWP1Q13610 501 aa15.41■□□□□ 0.06
TRAF3-204ENST00000539721 CYLC2Q14093 348 aaPredicted RBP15.41■□□□□ 0.06
TRAF3-204ENST00000539721 ZC3H12BQ5HYM0 836 aaKnown RBP15.41■□□□□ 0.06
TRAF3-204ENST00000539721 SNAP47Q5SQN1 464 aa15.41■□□□□ 0.06
TRAF3-204ENST00000539721 DBX2Q6ZNG2 339 aa15.41■□□□□ 0.06
TRAF3-204ENST00000539721 FAM9CQ8IZT9 166 aa15.41■□□□□ 0.06
TRAF3-204ENST00000539721 CAMKVQ8NCB2 501 aa15.41■□□□□ 0.06
TRAF3-204ENST00000539721 NT5CQ8TCD5 201 aa15.41■□□□□ 0.06
TRAF3-204ENST00000539721 RHBDD1Q8TEB9 315 aa15.41■□□□□ 0.06
TRAF3-204ENST00000539721 TM4SF19Q96DZ7 209 aa15.41■□□□□ 0.06
TRAF3-204ENST00000539721 CNDP2Q96KP4 475 aaKnown RBP15.41■□□□□ 0.06
TRAF3-204ENST00000539721 TSSK3Q96PN8 268 aa15.41■□□□□ 0.06
TRAF3-204ENST00000539721 SORBS1Q9BX66 1292 aaKnown RBP15.41■□□□□ 0.06
TRAF3-204ENST00000539721 DPY30Q9C005 99 aa15.41■□□□□ 0.06
TRAF3-204ENST00000539721 IRF2BPLQ9H1B7 796 aa15.41■□□□□ 0.06
TRAF3-204ENST00000539721 KLHL31Q9H511 634 aa15.41■□□□□ 0.06
TRAF3-204ENST00000539721 SEMA4GQ9NTN9 838 aa15.41■□□□□ 0.06
TRAF3-204ENST00000539721 TMEM9Q9P0T7 183 aa15.41■□□□□ 0.06
TRAF3-204ENST00000539721 MYO15AQ9UKN7 3530 aa15.41■□□□□ 0.06
TRAF3-204ENST00000539721 CACNA1HO95180 2353 aa15.41■□□□□ 0.06
TRAF3-204ENST00000539721 ASXL3Q9C0F0 2248 aa15.41■□□□□ 0.06
TRAF3-204ENST00000539721 LOC105369274A0A096LPK9 316 aa15.41■□□□□ 0.06
TRAF3-204ENST00000539721 LOC102723532A0A0G2JNH3 316 aa15.41■□□□□ 0.06
TRAF3-204ENST00000539721 H0YGG7 62 aa15.41■□□□□ 0.06
TRAF3-204ENST00000539721 RTCAO00442 366 aaKnown RBP15.41■□□□□ 0.06
TRAF3-204ENST00000539721 NR5A2O00482 541 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms