RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 PAPD4Q6PIY7 484 aaKnown RBP11.78□□□□□ -0.52
VAMP1-206ENST00000538970 KIAA0408Q6ZU52 694 aa11.78□□□□□ -0.52
VAMP1-206ENST00000538970 AFAP1L2Q8N4X5 818 aa11.78□□□□□ -0.52
VAMP1-206ENST00000538970 ABHD11Q8NFV4 315 aa11.78□□□□□ -0.52
VAMP1-206ENST00000538970 OR5T3Q8NGG3 340 aa11.78□□□□□ -0.52
VAMP1-206ENST00000538970 OR56A3Q8NH54 315 aa11.78□□□□□ -0.52
VAMP1-206ENST00000538970 GABPB2Q8TAK5 448 aaPredicted RBP11.78□□□□□ -0.52
VAMP1-206ENST00000538970 ACTRT1Q8TDG2 376 aa11.78□□□□□ -0.52
VAMP1-206ENST00000538970 TSLPQ969D9 159 aa11.78□□□□□ -0.52
VAMP1-206ENST00000538970 PEX11GQ96HA9 241 aa11.78□□□□□ -0.52
VAMP1-206ENST00000538970 HIST1H2AHQ96KK5 128 aa11.78□□□□□ -0.52
VAMP1-206ENST00000538970 SIGLEC12Q96PQ1 595 aa11.78□□□□□ -0.52
VAMP1-206ENST00000538970 OR1F2PQ96R84 312 aa11.78□□□□□ -0.52
VAMP1-206ENST00000538970 HIST1H2AJQ99878 128 aa11.78□□□□□ -0.52
VAMP1-206ENST00000538970 HAUS8Q9BT25 410 aa11.78□□□□□ -0.52
VAMP1-206ENST00000538970 H2AFJQ9BTM1 129 aa11.78□□□□□ -0.52
VAMP1-206ENST00000538970 SARGQ9BW04 601 aa11.78□□□□□ -0.52
VAMP1-206ENST00000538970 KCNK13Q9HB14 408 aa11.78□□□□□ -0.52
VAMP1-206ENST00000538970 MMP25Q9NPA2 562 aa11.78□□□□□ -0.52
VAMP1-206ENST00000538970 LANCL2Q9NS86 450 aa11.78□□□□□ -0.52
VAMP1-206ENST00000538970 SLC17A6Q9P2U8 582 aa11.78□□□□□ -0.52
VAMP1-206ENST00000538970 KLF2Q9Y5W3 355 aaPredicted RBP11.78□□□□□ -0.52
VAMP1-206ENST00000538970 DIDO1Q9BTC0 2240 aaKnown RBP11.77□□□□□ -0.53
VAMP1-206ENST00000538970 GOLGA6L10A0A0M3HER8 536 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 MAGEB17A8MXT2 336 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 CCL21O00585 134 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 DNALI1O14645 258 aaPredicted RBP11.77□□□□□ -0.53
VAMP1-206ENST00000538970 NDUFS4O43181 175 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 NRDCO43847 1150 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 MAN1A2O60476 641 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 GALR3O60755 368 aaPredicted RBP11.77□□□□□ -0.53
VAMP1-206ENST00000538970 WISP2O76076 250 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 TTC4O95801 387 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 AHSGP02765 367 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 CCR8P51685 355 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 AP1S2P56377 157 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 RBPJQ06330 500 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 USP10Q14694 798 aaKnown RBP11.77□□□□□ -0.53
VAMP1-206ENST00000538970 HERC3Q15034 1050 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 PPP1R7Q15435 360 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 OR1C1Q15619 314 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 NSDHLQ15738 373 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 MEP1AQ16819 746 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 MSS51Q4VC12 460 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 DUPD1Q68J44 220 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 MTFR2Q6P444 385 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 GALNT7Q86SF2 657 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 MRGPRGQ86SM5 289 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 ZNF808Q8N4W9 903 aaPredicted RBP11.77□□□□□ -0.53
VAMP1-206ENST00000538970 ZNF740Q8NDX6 193 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 PLPP5Q8NEB5 264 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 OR4K1Q8NGD4 311 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 PYCR2Q96C36 320 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 CERS2Q96G23 380 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 SCMH1Q96GD3 660 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 OR4K3Q96R72 315 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 OSBPL9Q96SU4 736 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 LPAR4Q99677 370 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 UTP23Q9BRU9 249 aaKnown RBP11.77□□□□□ -0.53
VAMP1-206ENST00000538970 HES7Q9BYE0 225 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 SPNS1Q9H2V7 528 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 PLAC1Q9HBJ0 212 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 ANKRD10Q9NXR5 420 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 ARL15Q9NXU5 204 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 SH3BGRL2Q9UJC5 107 aa11.77□□□□□ -0.53
VAMP1-206ENST00000538970 SVILO95425 2214 aa11.76□□□□□ -0.53
VAMP1-206ENST00000538970 TRBC2A0A5B9 178 aa11.76□□□□□ -0.53
VAMP1-206ENST00000538970 ASPDHA6ND91 283 aa11.76□□□□□ -0.53
VAMP1-206ENST00000538970 TTI1O43156 1089 aa11.76□□□□□ -0.53
VAMP1-206ENST00000538970 OR1F1O43749 312 aa11.76□□□□□ -0.53
VAMP1-206ENST00000538970 SLC19A2O60779 497 aa11.76□□□□□ -0.53
VAMP1-206ENST00000538970 FHP07954 510 aa11.76□□□□□ -0.53
VAMP1-206ENST00000538970 ALOX12P18054 663 aa11.76□□□□□ -0.53
VAMP1-206ENST00000538970 CD96P40200 585 aa11.76□□□□□ -0.53
VAMP1-206ENST00000538970 ST13P50502 369 aaKnown RBP11.76□□□□□ -0.53
VAMP1-206ENST00000538970 PGGT1BP53609 377 aa11.76□□□□□ -0.53
VAMP1-206ENST00000538970 SLC26A5P58743 744 aa11.76□□□□□ -0.53
VAMP1-206ENST00000538970 IL2P60568 153 aa11.76□□□□□ -0.53
VAMP1-206ENST00000538970 PDAP1Q13442 181 aaKnown RBP11.76□□□□□ -0.53
VAMP1-206ENST00000538970 PWP1Q13610 501 aa11.76□□□□□ -0.53
VAMP1-206ENST00000538970 NAA30Q147X3 362 aaPredicted RBP11.76□□□□□ -0.53
VAMP1-206ENST00000538970 DEFB134Q4QY38 66 aa11.76□□□□□ -0.53
VAMP1-206ENST00000538970 HECTD2Q5U5R9 776 aa11.76□□□□□ -0.53
VAMP1-206ENST00000538970 RPTNQ6XPR3 784 aa11.76□□□□□ -0.53
VAMP1-206ENST00000538970 BNC2Q6ZN30 1099 aaPredicted RBP11.76□□□□□ -0.53
VAMP1-206ENST00000538970 STRA8Q7Z7C7 330 aa11.76□□□□□ -0.53
VAMP1-206ENST00000538970 ZGRF1Q86YA3 2104 aa11.76□□□□□ -0.53
VAMP1-206ENST00000538970 IGDCC3Q8IVU1 814 aa11.76□□□□□ -0.53
VAMP1-206ENST00000538970 MCEMP1Q8IX19 187 aa11.76□□□□□ -0.53
VAMP1-206ENST00000538970 LGI4Q8N135 537 aa11.76□□□□□ -0.53
VAMP1-206ENST00000538970 SLC5A8Q8N695 610 aa11.76□□□□□ -0.53
VAMP1-206ENST00000538970 NT5CQ8TCD5 201 aa11.76□□□□□ -0.53
VAMP1-206ENST00000538970 THAP3Q8WTV1 239 aaPredicted RBP11.76□□□□□ -0.53
VAMP1-206ENST00000538970 SLCO2A1Q92959 643 aa11.76□□□□□ -0.53
VAMP1-206ENST00000538970 TBC1D20Q96BZ9 403 aa11.76□□□□□ -0.53
VAMP1-206ENST00000538970 FBXL8Q96CD0 374 aa11.76□□□□□ -0.53
VAMP1-206ENST00000538970 SNF8Q96H20 258 aa11.76□□□□□ -0.53
VAMP1-206ENST00000538970 POM121Q96HA1 1249 aa11.76□□□□□ -0.53
VAMP1-206ENST00000538970 NAT9Q9BTE0 207 aa11.76□□□□□ -0.53
VAMP1-206ENST00000538970 KLHL1Q9NR64 748 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms