RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 SLC12A2P55011 1212 aa7.95□□□□□ -1.14
SPARC-208ENST00000538026 CDC16Q13042 620 aa7.95□□□□□ -1.14
SPARC-208ENST00000538026 DOC2AQ14183 400 aa7.95□□□□□ -1.14
SPARC-208ENST00000538026 UAP1Q16222 522 aaPredicted RBP7.95□□□□□ -1.14
SPARC-208ENST00000538026 NADK2Q4G0N4 442 aa7.95□□□□□ -1.14
SPARC-208ENST00000538026 LACTB2Q53H82 288 aaPredicted RBP7.95□□□□□ -1.14
SPARC-208ENST00000538026 SULT1C3Q6IMI6 304 aa7.95□□□□□ -1.14
SPARC-208ENST00000538026 TMEM205Q6UW68 189 aa7.95□□□□□ -1.14
SPARC-208ENST00000538026 ASB18Q6ZVZ8 466 aa7.95□□□□□ -1.14
SPARC-208ENST00000538026 ZNF605Q86T29 641 aa7.95□□□□□ -1.14
SPARC-208ENST00000538026 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.95□□□□□ -1.14
SPARC-208ENST00000538026 RNF175Q8N4F7 328 aa7.95□□□□□ -1.14
SPARC-208ENST00000538026 TMEM102Q8N9M5 508 aaPredicted RBP7.95□□□□□ -1.14
SPARC-208ENST00000538026 Q8NA96 180 aa7.95□□□□□ -1.14
SPARC-208ENST00000538026 CAMKVQ8NCB2 501 aa7.95□□□□□ -1.14
SPARC-208ENST00000538026 OR51Q1Q8NH59 317 aa7.95□□□□□ -1.14
SPARC-208ENST00000538026 ZCCHC10Q8TBK6 192 aa7.95□□□□□ -1.14
SPARC-208ENST00000538026 MZB1Q8WU39 189 aa7.95□□□□□ -1.14
SPARC-208ENST00000538026 RERGQ96A58 199 aaPredicted RBP7.95□□□□□ -1.14
SPARC-208ENST00000538026 TRIM44Q96DX7 344 aaPredicted RBP7.95□□□□□ -1.14
SPARC-208ENST00000538026 WDR34Q96EX3 536 aa7.95□□□□□ -1.14
SPARC-208ENST00000538026 PAFAH2Q99487 392 aa7.95□□□□□ -1.14
SPARC-208ENST00000538026 SMAD5Q99717 465 aaKnown RBP7.95□□□□□ -1.14
SPARC-208ENST00000538026 EGFL8Q99944 293 aa7.95□□□□□ -1.14
SPARC-208ENST00000538026 WDR77Q9BQA1 342 aaPredicted RBP7.95□□□□□ -1.14
SPARC-208ENST00000538026 C17orf62Q9BQA9 187 aa7.95□□□□□ -1.14
SPARC-208ENST00000538026 CD244Q9BZW8 370 aa7.95□□□□□ -1.14
SPARC-208ENST00000538026 SLC6A16Q9GZN6 736 aa7.95□□□□□ -1.14
SPARC-208ENST00000538026 VN1R1Q9GZP7 353 aa7.95□□□□□ -1.14
SPARC-208ENST00000538026 EPN3Q9H201 632 aa7.95□□□□□ -1.14
SPARC-208ENST00000538026 ANKZF1Q9H8Y5 726 aa7.95□□□□□ -1.14
SPARC-208ENST00000538026 LANCL2Q9NS86 450 aa7.95□□□□□ -1.14
SPARC-208ENST00000538026 HCN3Q9P1Z3 774 aa7.95□□□□□ -1.14
SPARC-208ENST00000538026 TXNDC16Q9P2K2 825 aa7.95□□□□□ -1.14
SPARC-208ENST00000538026 TRPC4Q9UBN4 977 aa7.95□□□□□ -1.14
SPARC-208ENST00000538026 ZNF282Q9UDV7 671 aaPredicted RBP7.95□□□□□ -1.14
SPARC-208ENST00000538026 MTRF1LQ9UGC7 380 aaKnown RBP7.95□□□□□ -1.14
SPARC-208ENST00000538026 ZFP69BQ9UJL9 534 aa7.95□□□□□ -1.14
SPARC-208ENST00000538026 C3orf18Q9UK00 162 aa7.95□□□□□ -1.14
SPARC-208ENST00000538026 ACOT9Q9Y305 439 aa7.95□□□□□ -1.14
SPARC-208ENST00000538026 NAALAD2Q9Y3Q0 740 aa7.95□□□□□ -1.14
SPARC-208ENST00000538026 MAP4K5Q9Y4K4 846 aa7.95□□□□□ -1.14
SPARC-208ENST00000538026 PCDHGA9Q9Y5G4 932 aaKnown RBP7.95□□□□□ -1.14
SPARC-208ENST00000538026 CLDN16Q9Y5I7 305 aa7.95□□□□□ -1.14
SPARC-208ENST00000538026 SLC22A7Q9Y694 548 aa7.95□□□□□ -1.14
SPARC-208ENST00000538026 LOC102723996A0A087X1L8 192 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 IGHV3-20A0A0C4DH32 117 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 LRIT2A6NDA9 550 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 IDSB3KWA1 339 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 POC1B-GALNT4F8VUJ3 575 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 MKRN2OSH3BPM6 223 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 TXNDC9O14530 226 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 NDUFS4O43181 175 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 GALR3O60755 368 aaPredicted RBP7.94□□□□□ -1.14
SPARC-208ENST00000538026 STK16O75716 305 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 SIX3O95343 332 aaPredicted RBP7.94□□□□□ -1.14
SPARC-208ENST00000538026 ABHD2P08910 425 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 CD63P08962 238 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 ZNF888P0CJ79 500 aaPredicted RBP7.94□□□□□ -1.14
SPARC-208ENST00000538026 PIM1P11309 404 aaPredicted RBP7.94□□□□□ -1.14
SPARC-208ENST00000538026 SFTPCP11686 197 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 GNAZP19086 355 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 HNRNPH1P31943 449 aaKnown RBP7.94□□□□□ -1.14
SPARC-208ENST00000538026 AHRP35869 848 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 HNF4AP41235 474 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 CASP2P42575 452 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 EMP2P54851 167 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 OLR1P78380 273 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 PCDH1Q08174 1060 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 ILF2Q12905 390 aaKnown RBP7.94□□□□□ -1.14
SPARC-208ENST00000538026 PWP1Q13610 501 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 SLBPQ14493 270 aaKnown RBP eCLIP7.94□□□□□ -1.14
SPARC-208ENST00000538026 PCOLCEQ15113 449 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 TECRLQ5HYJ1 363 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 LANCL3Q6ZV70 420 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 SH2D5Q6ZV89 423 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 RAPH1Q70E73 1250 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 MED25Q71SY5 747 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 UBE3DQ7Z6J8 389 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 RAB43Q86YS6 212 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 IFT20Q8IY31 132 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 GALNT16Q8N428 558 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 RHEBL1Q8TAI7 183 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 STAG3L4Q8TBR4 150 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 UBTD2Q8WUN7 234 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 EXT2Q93063 718 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 NACC2Q96BF6 587 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 MIEF2Q96C03 454 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 IMMP1LQ96LU5 166 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 CRB3Q9BUF7 120 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 SLC25A23Q9BV35 468 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 TRIM4Q9C037 500 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 NMRAL1Q9HBL8 299 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 SEMA3GQ9NS98 782 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 DNAJC11Q9NVH1 559 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 CD274Q9NZQ7 290 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 ZNF180Q9UJW8 692 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 RNF112Q9ULX5 631 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 CDC14AQ9UNH5 594 aa7.94□□□□□ -1.14
SPARC-208ENST00000538026 DYRK1BQ9Y463 629 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms