RNA–Protein interactions for RNA: ENST00000537642.1

USP28-204, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 732 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-204ENST00000537642 CDKL4Q5MAI5 379 aa13.99□□□□□ -0.17
USP28-204ENST00000537642 TMEM205Q6UW68 189 aa13.99□□□□□ -0.17
USP28-204ENST00000537642 SLCO4C1Q6ZQN7 724 aa13.99□□□□□ -0.17
USP28-204ENST00000537642 RAPH1Q70E73 1250 aa13.99□□□□□ -0.17
USP28-204ENST00000537642 NDUFAF7Q7L592 441 aa13.99□□□□□ -0.17
USP28-204ENST00000537642 RELL1Q8IUW5 271 aa13.99□□□□□ -0.17
USP28-204ENST00000537642 TCAIMQ8N3R3 496 aa13.99□□□□□ -0.17
USP28-204ENST00000537642 PNPLA2Q96AD5 504 aa13.99□□□□□ -0.17
USP28-204ENST00000537642 MRRFQ96E11 262 aaKnown RBP13.99□□□□□ -0.17
USP28-204ENST00000537642 THOC3Q96J01 351 aaKnown RBP13.99□□□□□ -0.17
USP28-204ENST00000537642 VN1R1Q9GZP7 353 aa13.99□□□□□ -0.17
USP28-204ENST00000537642 LHPPQ9H008 270 aa13.99□□□□□ -0.17
USP28-204ENST00000537642 IGSF5Q9NSI5 407 aa13.99□□□□□ -0.17
USP28-204ENST00000537642 WWOXQ9NZC7 414 aa13.99□□□□□ -0.17
USP28-204ENST00000537642 MTRF1LQ9UGC7 380 aaKnown RBP13.99□□□□□ -0.17
USP28-204ENST00000537642 UBR5O95071 2799 aaPredicted RBP13.98□□□□□ -0.17
USP28-204ENST00000537642 IGHV1-45A0A0A0MS14 117 aa13.98□□□□□ -0.17
USP28-204ENST00000537642 NSG1A0A0A6YYJ2 146 aa13.98□□□□□ -0.17
USP28-204ENST00000537642 ZNF860A6NHJ4 632 aa13.98□□□□□ -0.17
USP28-204ENST00000537642 PCDH17O14917 1159 aa13.98□□□□□ -0.17
USP28-204ENST00000537642 GALR3O60755 368 aaPredicted RBP13.98□□□□□ -0.17
USP28-204ENST00000537642 B3GALT4O96024 378 aa13.98□□□□□ -0.17
USP28-204ENST00000537642 C1GALT1C1LP0DN25 315 aa13.98□□□□□ -0.17
USP28-204ENST00000537642 ALOX12P18054 663 aa13.98□□□□□ -0.17
USP28-204ENST00000537642 GNAZP19086 355 aa13.98□□□□□ -0.17
USP28-204ENST00000537642 CXCR2P25025 360 aa13.98□□□□□ -0.17
USP28-204ENST00000537642 CRABP2P29373 138 aa13.98□□□□□ -0.17
USP28-204ENST00000537642 PHBP35232 272 aa13.98□□□□□ -0.17
USP28-204ENST00000537642 HSPA7P48741 367 aa13.98□□□□□ -0.17
USP28-204ENST00000537642 RGS1Q08116 209 aa13.98□□□□□ -0.17
USP28-204ENST00000537642 HYAL2Q12891 473 aa13.98□□□□□ -0.17
USP28-204ENST00000537642 CDC16Q13042 620 aa13.98□□□□□ -0.17
USP28-204ENST00000537642 BMPR2Q13873 1038 aa13.98□□□□□ -0.17
USP28-204ENST00000537642 HERC3Q15034 1050 aa13.98□□□□□ -0.17
USP28-204ENST00000537642 PCOLCEQ15113 449 aa13.98□□□□□ -0.17
USP28-204ENST00000537642 RBBP5Q15291 538 aaKnown RBP13.98□□□□□ -0.17
USP28-204ENST00000537642 PLEKHN1Q494U1 663 aaPredicted RBP13.98□□□□□ -0.17
USP28-204ENST00000537642 GLE1Q53GS7 698 aaKnown RBP13.98□□□□□ -0.17
USP28-204ENST00000537642 MROH9Q5TGP6 573 aa13.98□□□□□ -0.17
USP28-204ENST00000537642 SULT1C3Q6IMI6 304 aa13.98□□□□□ -0.17
USP28-204ENST00000537642 ISCA2Q86U28 154 aa13.98□□□□□ -0.17
USP28-204ENST00000537642 PDPRQ8NCN5 879 aa13.98□□□□□ -0.17
USP28-204ENST00000537642 OR5T3Q8NGG3 340 aa13.98□□□□□ -0.17
USP28-204ENST00000537642 KIF18AQ8NI77 898 aa13.98□□□□□ -0.17
USP28-204ENST00000537642 CPT1CQ8TCG5 803 aa13.98□□□□□ -0.17
USP28-204ENST00000537642 UTP15Q8TED0 518 aaKnown RBP13.98□□□□□ -0.17
USP28-204ENST00000537642 CREB3L4Q8TEY5 395 aa13.98□□□□□ -0.17
USP28-204ENST00000537642 IFT81Q8WYA0 676 aa13.98□□□□□ -0.17
USP28-204ENST00000537642 ESAMQ96AP7 390 aa13.98□□□□□ -0.17
USP28-204ENST00000537642 CYTH2Q99418 400 aa13.98□□□□□ -0.17
USP28-204ENST00000537642 SLC6A16Q9GZN6 736 aa13.98□□□□□ -0.17
USP28-204ENST00000537642 CDC42EP4Q9H3Q1 356 aaKnown RBP13.98□□□□□ -0.17
USP28-204ENST00000537642 ALG9Q9H6U8 611 aa13.98□□□□□ -0.17
USP28-204ENST00000537642 GPRC5BQ9NZH0 403 aa13.98□□□□□ -0.17
USP28-204ENST00000537642 CD274Q9NZQ7 290 aa13.98□□□□□ -0.17
USP28-204ENST00000537642 PTBP2Q9UKA9 531 aaKnown RBP13.98□□□□□ -0.17
USP28-204ENST00000537642 RNF112Q9ULX5 631 aa13.98□□□□□ -0.17
USP28-204ENST00000537642 OR2W5A6NFC9 320 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 PRAMEF4O60810 478 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 DNAJB6O75190 326 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 LTA4HP09960 611 aaKnown RBP13.97□□□□□ -0.17
USP28-204ENST00000537642 ZNF888P0CJ79 500 aaPredicted RBP13.97□□□□□ -0.17
USP28-204ENST00000537642 C8orf89P0DMQ9 161 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 SMIM10L1P0DMW3 83 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 TFEBP19484 476 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 SLBPQ14493 270 aaKnown RBP eCLIP13.97□□□□□ -0.17
USP28-204ENST00000537642 MINDY4Q4G0A6 757 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 DEFB134Q4QY38 66 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 PRR30Q53SZ7 412 aaPredicted RBP13.97□□□□□ -0.17
USP28-204ENST00000537642 MFSD4BQ5TF39 518 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 AGAP7PQ5VUJ5 663 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 IRAK1BP1Q5VVH5 260 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 PRAMEF9Q5VWM5 478 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 IGFL2Q6UWQ7 119 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 CEP128Q6ZU80 1094 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 LANCL3Q6ZV70 420 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 TBC1D1Q86TI0 1168 aaPredicted RBP13.97□□□□□ -0.17
USP28-204ENST00000537642 KBTBD2Q8IY47 623 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.97□□□□□ -0.17
USP28-204ENST00000537642 AMER2Q8N7J2 671 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 TRPV3Q8NET8 790 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 STAG3L4Q8TBR4 150 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 EXT2Q93063 718 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 NXNL1Q96CM4 212 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 PEX11GQ96HA9 241 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 SMIM10Q96HG1 83 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 AGAP4Q96P64 663 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 ATOH8Q96SQ7 321 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 FMO2Q99518 471 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 FUT8Q9BYC5 575 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 AICDAQ9GZX7 198 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 ZNF700Q9H0M5 742 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 KLHL31Q9H511 634 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 ACSS3Q9H6R3 686 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 CNOT10Q9H9A5 744 aaKnown RBP13.97□□□□□ -0.17
USP28-204ENST00000537642 NMRAL1Q9HBL8 299 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 SLAMF7Q9NQ25 335 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 DNAJC11Q9NVH1 559 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 ASB1Q9Y576 335 aa13.97□□□□□ -0.17
USP28-204ENST00000537642 CSAG2Q9Y5P2 127 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms