RNA–Protein interactions for RNA: ENST00000537164.1

SFSWAP-205, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-205ENST00000537164 C18orf21Q32NC0 220 aaPredicted RBP16.27■□□□□ 0.2
SFSWAP-205ENST00000537164 NDUFAF7Q7L592 441 aa16.27■□□□□ 0.2
SFSWAP-205ENST00000537164 TMPRSS11BQ86T26 416 aa16.27■□□□□ 0.2
SFSWAP-205ENST00000537164 OR51Q1Q8NH59 317 aa16.27■□□□□ 0.2
SFSWAP-205ENST00000537164 STAG3L4Q8TBR4 150 aa16.27■□□□□ 0.2
SFSWAP-205ENST00000537164 PNPLA2Q96AD5 504 aa16.27■□□□□ 0.2
SFSWAP-205ENST00000537164 SEC16BQ96JE7 1060 aa16.27■□□□□ 0.2
SFSWAP-205ENST00000537164 YIPF2Q9BWQ6 316 aa16.27■□□□□ 0.2
SFSWAP-205ENST00000537164 LHPPQ9H008 270 aa16.27■□□□□ 0.2
SFSWAP-205ENST00000537164 CDC42EP4Q9H3Q1 356 aaKnown RBP16.27■□□□□ 0.2
SFSWAP-205ENST00000537164 CLK4Q9HAZ1 481 aaKnown RBP16.27■□□□□ 0.2
SFSWAP-205ENST00000537164 NMRAL1Q9HBL8 299 aa16.27■□□□□ 0.2
SFSWAP-205ENST00000537164 MKL2Q9ULH7 1088 aa16.27■□□□□ 0.2
SFSWAP-205ENST00000537164 NAALAD2Q9Y3Q0 740 aa16.27■□□□□ 0.2
SFSWAP-205ENST00000537164 RP1L1Q8IWN7 2480 aaPredicted RBP16.27■□□□□ 0.19
SFSWAP-205ENST00000537164 IGHV1-45A0A0A0MS14 117 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 NCF1BA6NI72 391 aaPredicted RBP16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 NCF1CA8MVU1 366 aaPredicted RBP16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 PYCARD-AS1I3L0S3 204 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 SGK494L7N484 410 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 GALR3O60755 368 aaPredicted RBP16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 KLHL18O94889 574 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 HEXBP07686 556 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 SERPINA6P08185 405 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 LTA4HP09960 611 aaKnown RBP16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 SMIM10L1P0DMW3 83 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 NCF1P14598 390 aaPredicted RBP16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 ALOX12P18054 663 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 CXCR2P25025 360 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 ITGA3P26006 1051 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 GSTM2P28161 218 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 SKP1P63208 163 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 RGS1Q08116 209 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 E2F2Q14209 437 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 UBAP2Q5T6F2 1119 aaKnown RBP16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 SLC6A19Q695T7 634 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 RAPH1Q70E73 1250 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 TBC1D1Q86TI0 1168 aaPredicted RBP16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 CENPLQ8N0S6 344 aaPredicted RBP16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 CEP112Q8N8E3 955 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 Q8NA96 180 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 RHEBL1Q8TAI7 183 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 ZCCHC10Q8TBK6 192 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 CREB3L4Q8TEY5 395 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 MIB2Q96AX9 1013 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 C8orf44Q96CB5 159 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 WDR34Q96EX3 536 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 SMIM10Q96HG1 83 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 OR1F2PQ96R84 312 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 ATOH8Q96SQ7 321 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 VN1R1Q9GZP7 353 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 ZNF700Q9H0M5 742 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 CLMPQ9H6B4 373 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 NT5DC2Q9H857 520 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 IGSF5Q9NSI5 407 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 DNAJC11Q9NVH1 559 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 RNF112Q9ULX5 631 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 ACOT9Q9Y305 439 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 CNTRLQ7Z7A1 2325 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 SCN2AQ99250 2005 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 SHANK1Q9Y566 2161 aa16.26■□□□□ 0.19
SFSWAP-205ENST00000537164 LRRK2Q5S007 2527 aa16.25■□□□□ 0.19
SFSWAP-205ENST00000537164 A0A087X1B8 175 aa16.25■□□□□ 0.19
SFSWAP-205ENST00000537164 URADA6NGE7 173 aa16.25■□□□□ 0.19
SFSWAP-205ENST00000537164 KERAO60938 352 aa16.25■□□□□ 0.19
SFSWAP-205ENST00000537164 ALOX12BO75342 701 aa16.25■□□□□ 0.19
SFSWAP-205ENST00000537164 STK16O75716 305 aa16.25■□□□□ 0.19
SFSWAP-205ENST00000537164 TFEBP19484 476 aa16.25■□□□□ 0.19
SFSWAP-205ENST00000537164 VARSP26640 1264 aaKnown RBP16.25■□□□□ 0.19
SFSWAP-205ENST00000537164 GMPRP36959 345 aa16.25■□□□□ 0.19
SFSWAP-205ENST00000537164 XCR1P46094 333 aa16.25■□□□□ 0.19
SFSWAP-205ENST00000537164 PCDH1Q08174 1060 aa16.25■□□□□ 0.19
SFSWAP-205ENST00000537164 COLEC12Q5KU26 742 aa16.25■□□□□ 0.19
SFSWAP-205ENST00000537164 MROH9Q5TGP6 573 aa16.25■□□□□ 0.19
SFSWAP-205ENST00000537164 AGAP7PQ5VUJ5 663 aa16.25■□□□□ 0.19
SFSWAP-205ENST00000537164 TMIGD1Q6UXZ0 262 aa16.25■□□□□ 0.19
SFSWAP-205ENST00000537164 ABHD13Q7L211 337 aa16.25■□□□□ 0.19
SFSWAP-205ENST00000537164 SHISA5Q8N114 240 aa16.25■□□□□ 0.19
SFSWAP-205ENST00000537164 TTLQ8NG68 377 aa16.25■□□□□ 0.19
SFSWAP-205ENST00000537164 UTP15Q8TED0 518 aaKnown RBP16.25■□□□□ 0.19
SFSWAP-205ENST00000537164 SLC44A1Q8WWI5 657 aa16.25■□□□□ 0.19
SFSWAP-205ENST00000537164 IFT81Q8WYA0 676 aa16.25■□□□□ 0.19
SFSWAP-205ENST00000537164 TM9SF4Q92544 642 aa16.25■□□□□ 0.19
SFSWAP-205ENST00000537164 ISL2Q96A47 359 aa16.25■□□□□ 0.19
SFSWAP-205ENST00000537164 TRIM44Q96DX7 344 aaPredicted RBP16.25■□□□□ 0.19
SFSWAP-205ENST00000537164 AGAP4Q96P64 663 aa16.25■□□□□ 0.19
SFSWAP-205ENST00000537164 ALG9Q9H6U8 611 aa16.25■□□□□ 0.19
SFSWAP-205ENST00000537164 WWOXQ9NZC7 414 aa16.25■□□□□ 0.19
SFSWAP-205ENST00000537164 NUDT4Q9NZJ9 180 aa16.25■□□□□ 0.19
SFSWAP-205ENST00000537164 CD274Q9NZQ7 290 aa16.25■□□□□ 0.19
SFSWAP-205ENST00000537164 CPAMD8Q8IZJ3 1885 aa16.25■□□□□ 0.19
SFSWAP-205ENST00000537164 NSG1A0A0A6YYJ2 146 aa16.24■□□□□ 0.19
SFSWAP-205ENST00000537164 PRAMEF4O60810 478 aa16.24■□□□□ 0.19
SFSWAP-205ENST00000537164 H2AFYO75367 372 aaKnown RBP16.24■□□□□ 0.19
SFSWAP-205ENST00000537164 RDH16O75452 317 aa16.24■□□□□ 0.19
SFSWAP-205ENST00000537164 JRKO75564 520 aa16.24■□□□□ 0.19
SFSWAP-205ENST00000537164 ALDOAP04075 364 aaKnown RBP16.24■□□□□ 0.19
SFSWAP-205ENST00000537164 C2P06681 752 aa16.24■□□□□ 0.19
SFSWAP-205ENST00000537164 C8orf89P0DMQ9 161 aa16.24■□□□□ 0.19
SFSWAP-205ENST00000537164 MTHFD2P13995 350 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms