RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 AHSGP02765 367 aa18.53■□□□□ 0.56
TNFRSF1B-204ENST00000536782 CCR8P51685 355 aa18.53■□□□□ 0.56
TNFRSF1B-204ENST00000536782 RHAGQ02094 409 aa18.53■□□□□ 0.56
TNFRSF1B-204ENST00000536782 TUBA3CQ13748 450 aa18.53■□□□□ 0.56
TNFRSF1B-204ENST00000536782 ABRAXAS2Q15018 415 aa18.53■□□□□ 0.56
TNFRSF1B-204ENST00000536782 SPANXN3Q5MJ09 141 aa18.53■□□□□ 0.56
TNFRSF1B-204ENST00000536782 DUPD1Q68J44 220 aa18.53■□□□□ 0.56
TNFRSF1B-204ENST00000536782 TUBA3EQ6PEY2 450 aa18.53■□□□□ 0.56
TNFRSF1B-204ENST00000536782 PAPD4Q6PIY7 484 aaKnown RBP18.53■□□□□ 0.56
TNFRSF1B-204ENST00000536782 KIAA0408Q6ZU52 694 aa18.53■□□□□ 0.56
TNFRSF1B-204ENST00000536782 CRLF3Q8IUI8 442 aa18.53■□□□□ 0.56
TNFRSF1B-204ENST00000536782 ABHD11Q8NFV4 315 aa18.53■□□□□ 0.56
TNFRSF1B-204ENST00000536782 ACTRT1Q8TDG2 376 aa18.53■□□□□ 0.56
TNFRSF1B-204ENST00000536782 SNF8Q96H20 258 aa18.53■□□□□ 0.56
TNFRSF1B-204ENST00000536782 LPAR4Q99677 370 aa18.53■□□□□ 0.56
TNFRSF1B-204ENST00000536782 UTP23Q9BRU9 249 aaKnown RBP18.53■□□□□ 0.56
TNFRSF1B-204ENST00000536782 NAT9Q9BTE0 207 aa18.53■□□□□ 0.56
TNFRSF1B-204ENST00000536782 RBCK1Q9BYM8 510 aa18.53■□□□□ 0.56
TNFRSF1B-204ENST00000536782 UNKQ9C0B0 810 aaKnown RBP18.53■□□□□ 0.56
TNFRSF1B-204ENST00000536782 ARL15Q9NXU5 204 aa18.53■□□□□ 0.56
TNFRSF1B-204ENST00000536782 CACNA1CQ13936 2221 aa18.52■□□□□ 0.56
TNFRSF1B-204ENST00000536782 ZNF860A6NHJ4 632 aa18.52■□□□□ 0.56
TNFRSF1B-204ENST00000536782 MAGEB17A8MXT2 336 aa18.52■□□□□ 0.56
TNFRSF1B-204ENST00000536782 NDUFS4O43181 175 aa18.52■□□□□ 0.56
TNFRSF1B-204ENST00000536782 OR1F1O43749 312 aa18.52■□□□□ 0.56
TNFRSF1B-204ENST00000536782 CD96P40200 585 aa18.52■□□□□ 0.56
TNFRSF1B-204ENST00000536782 CASP6P55212 293 aa18.52■□□□□ 0.56
TNFRSF1B-204ENST00000536782 AP1S2P56377 157 aa18.52■□□□□ 0.56
TNFRSF1B-204ENST00000536782 IL2P60568 153 aa18.52■□□□□ 0.56
TNFRSF1B-204ENST00000536782 SKP1P63208 163 aa18.52■□□□□ 0.56
TNFRSF1B-204ENST00000536782 MEF2AQ02078 507 aaPredicted RBP18.52■□□□□ 0.56
TNFRSF1B-204ENST00000536782 PDAP1Q13442 181 aaKnown RBP18.52■□□□□ 0.56
TNFRSF1B-204ENST00000536782 PWP1Q13610 501 aa18.52■□□□□ 0.56
TNFRSF1B-204ENST00000536782 MRGPRGQ86SM5 289 aa18.52■□□□□ 0.56
TNFRSF1B-204ENST00000536782 CNTN4Q8IWV2 1026 aa18.52■□□□□ 0.56
TNFRSF1B-204ENST00000536782 ZNF808Q8N4W9 903 aaPredicted RBP18.52■□□□□ 0.56
TNFRSF1B-204ENST00000536782 TBC1D19Q8N5T2 526 aa18.52■□□□□ 0.56
TNFRSF1B-204ENST00000536782 SLC5A8Q8N695 610 aa18.52■□□□□ 0.56
TNFRSF1B-204ENST00000536782 MDS2Q8NDY4 140 aa18.52■□□□□ 0.56
TNFRSF1B-204ENST00000536782 OR4K1Q8NGD4 311 aa18.52■□□□□ 0.56
TNFRSF1B-204ENST00000536782 OR5T3Q8NGG3 340 aa18.52■□□□□ 0.56
TNFRSF1B-204ENST00000536782 PYCR2Q96C36 320 aa18.52■□□□□ 0.56
TNFRSF1B-204ENST00000536782 SIGLEC12Q96PQ1 595 aa18.52■□□□□ 0.56
TNFRSF1B-204ENST00000536782 OSBPL9Q96SU4 736 aa18.52■□□□□ 0.56
TNFRSF1B-204ENST00000536782 SARGQ9BW04 601 aa18.52■□□□□ 0.56
TNFRSF1B-204ENST00000536782 TRIM54Q9BYV2 358 aa18.52■□□□□ 0.56
TNFRSF1B-204ENST00000536782 LANCL2Q9NS86 450 aa18.52■□□□□ 0.56
TNFRSF1B-204ENST00000536782 ANKRD10Q9NXR5 420 aa18.52■□□□□ 0.56
TNFRSF1B-204ENST00000536782 SH3BGRL2Q9UJC5 107 aa18.52■□□□□ 0.56
TNFRSF1B-204ENST00000536782 GTF3C1Q12789 2109 aa18.52■□□□□ 0.55
TNFRSF1B-204ENST00000536782 CELSR1Q9NYQ6 3014 aa18.51■□□□□ 0.55
TNFRSF1B-204ENST00000536782 DNALI1O14645 258 aaPredicted RBP18.51■□□□□ 0.55
TNFRSF1B-204ENST00000536782 GALR3O60755 368 aaPredicted RBP18.51■□□□□ 0.55
TNFRSF1B-204ENST00000536782 SLC19A2O60779 497 aa18.51■□□□□ 0.55
TNFRSF1B-204ENST00000536782 BANF1O75531 89 aa18.51■□□□□ 0.55
TNFRSF1B-204ENST00000536782 MLYCDO95822 493 aa18.51■□□□□ 0.55
TNFRSF1B-204ENST00000536782 TSPAN12O95859 305 aa18.51■□□□□ 0.55
TNFRSF1B-204ENST00000536782 FHP07954 510 aa18.51■□□□□ 0.55
TNFRSF1B-204ENST00000536782 EEF1DP29692 281 aaKnown RBP18.51■□□□□ 0.55
TNFRSF1B-204ENST00000536782 OR4D2P58180 307 aa18.51■□□□□ 0.55
TNFRSF1B-204ENST00000536782 TAS2R50P59544 299 aa18.51■□□□□ 0.55
TNFRSF1B-204ENST00000536782 USP10Q14694 798 aaKnown RBP18.51■□□□□ 0.55
TNFRSF1B-204ENST00000536782 OR1C1Q15619 314 aa18.51■□□□□ 0.55
TNFRSF1B-204ENST00000536782 ZXDCQ2QGD7 858 aaPredicted RBP18.51■□□□□ 0.55
TNFRSF1B-204ENST00000536782 NIPAL1Q6NVV3 410 aa18.51■□□□□ 0.55
TNFRSF1B-204ENST00000536782 RPTNQ6XPR3 784 aa18.51■□□□□ 0.55
TNFRSF1B-204ENST00000536782 GALNT7Q86SF2 657 aa18.51■□□□□ 0.55
TNFRSF1B-204ENST00000536782 AFAP1L2Q8N4X5 818 aa18.51■□□□□ 0.55
TNFRSF1B-204ENST00000536782 ZNF740Q8NDX6 193 aa18.51■□□□□ 0.55
TNFRSF1B-204ENST00000536782 OR56A3Q8NH54 315 aa18.51■□□□□ 0.55
TNFRSF1B-204ENST00000536782 TSLPQ969D9 159 aa18.51■□□□□ 0.55
TNFRSF1B-204ENST00000536782 MOCOSQ96EN8 888 aa18.51■□□□□ 0.55
TNFRSF1B-204ENST00000536782 CERS2Q96G23 380 aa18.51■□□□□ 0.55
TNFRSF1B-204ENST00000536782 NPAS2Q99743 824 aa18.51■□□□□ 0.55
TNFRSF1B-204ENST00000536782 KLHL1Q9NR64 748 aa18.51■□□□□ 0.55
TNFRSF1B-204ENST00000536782 ASIC3Q9UHC3 531 aa18.51■□□□□ 0.55
TNFRSF1B-204ENST00000536782 NCOA6Q14686 2063 aaPredicted RBP18.51■□□□□ 0.55
TNFRSF1B-204ENST00000536782 ANKRD17O75179 2603 aaKnown RBP18.51■□□□□ 0.55
TNFRSF1B-204ENST00000536782 TRBC2A0A5B9 178 aa18.5■□□□□ 0.55
TNFRSF1B-204ENST00000536782 SERPIND1P05546 499 aa18.5■□□□□ 0.55
TNFRSF1B-204ENST00000536782 CD46P15529 392 aa18.5■□□□□ 0.55
TNFRSF1B-204ENST00000536782 ALOX12P18054 663 aa18.5■□□□□ 0.55
TNFRSF1B-204ENST00000536782 JAK1P23458 1154 aa18.5■□□□□ 0.55
TNFRSF1B-204ENST00000536782 RGS1Q08116 209 aa18.5■□□□□ 0.55
TNFRSF1B-204ENST00000536782 DEFB134Q4QY38 66 aa18.5■□□□□ 0.55
TNFRSF1B-204ENST00000536782 MSS51Q4VC12 460 aa18.5■□□□□ 0.55
TNFRSF1B-204ENST00000536782 KRTCAP3Q53RY4 240 aa18.5■□□□□ 0.55
TNFRSF1B-204ENST00000536782 SPINK14Q6IE38 97 aa18.5■□□□□ 0.55
TNFRSF1B-204ENST00000536782 BNC2Q6ZN30 1099 aaPredicted RBP18.5■□□□□ 0.55
TNFRSF1B-204ENST00000536782 MCEMP1Q8IX19 187 aa18.5■□□□□ 0.55
TNFRSF1B-204ENST00000536782 HORMAD2Q8N7B1 307 aa18.5■□□□□ 0.55
TNFRSF1B-204ENST00000536782 GPATCH11Q8N954 259 aa18.5■□□□□ 0.55
TNFRSF1B-204ENST00000536782 TMEM178AQ8NBL3 297 aa18.5■□□□□ 0.55
TNFRSF1B-204ENST00000536782 THAP3Q8WTV1 239 aaPredicted RBP18.5■□□□□ 0.55
TNFRSF1B-204ENST00000536782 ATL1Q8WXF7 558 aa18.5■□□□□ 0.55
TNFRSF1B-204ENST00000536782 ANP32BQ92688 251 aaKnown RBP18.5■□□□□ 0.55
TNFRSF1B-204ENST00000536782 TBC1D20Q96BZ9 403 aa18.5■□□□□ 0.55
TNFRSF1B-204ENST00000536782 SCMH1Q96GD3 660 aa18.5■□□□□ 0.55
TNFRSF1B-204ENST00000536782 OR4K3Q96R72 315 aa18.5■□□□□ 0.55
TNFRSF1B-204ENST00000536782 HES7Q9BYE0 225 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms