RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 G3BP2Q9UN86 482 aaKnown RBP13.5□□□□□ -0.25
UBE3B-206ENST00000536398 PCDHGB7Q9Y5F8 929 aa13.5□□□□□ -0.25
UBE3B-206ENST00000536398 KCNE2Q9Y6J6 123 aa13.5□□□□□ -0.25
UBE3B-206ENST00000536398 TTLL8A6PVC2 850 aa13.49□□□□□ -0.25
UBE3B-206ENST00000536398 C4orf51C9J302 202 aa13.49□□□□□ -0.25
UBE3B-206ENST00000536398 KIF2AO00139 706 aaPredicted RBP13.49□□□□□ -0.25
UBE3B-206ENST00000536398 MAP2K7O14733 419 aa13.49□□□□□ -0.25
UBE3B-206ENST00000536398 TUBB4AP04350 444 aa13.49□□□□□ -0.25
UBE3B-206ENST00000536398 SLC35G6P0C7Q6 338 aa13.49□□□□□ -0.25
UBE3B-206ENST00000536398 ZNF888P0CJ79 500 aaPredicted RBP13.49□□□□□ -0.25
UBE3B-206ENST00000536398 C1GALT1C1LP0DN25 315 aa13.49□□□□□ -0.25
UBE3B-206ENST00000536398 TFEBP19484 476 aa13.49□□□□□ -0.25
UBE3B-206ENST00000536398 CRABP2P29373 138 aa13.49□□□□□ -0.25
UBE3B-206ENST00000536398 GGT5P36269 586 aa13.49□□□□□ -0.25
UBE3B-206ENST00000536398 XCR1P46094 333 aa13.49□□□□□ -0.25
UBE3B-206ENST00000536398 AGTR2P50052 363 aa13.49□□□□□ -0.25
UBE3B-206ENST00000536398 FOXK1P85037 733 aa13.49□□□□□ -0.25
UBE3B-206ENST00000536398 PWP1Q13610 501 aa13.49□□□□□ -0.25
UBE3B-206ENST00000536398 PLEKHN1Q494U1 663 aaPredicted RBP13.49□□□□□ -0.25
UBE3B-206ENST00000536398 DEFB134Q4QY38 66 aa13.49□□□□□ -0.25
UBE3B-206ENST00000536398 PRR30Q53SZ7 412 aaPredicted RBP13.49□□□□□ -0.25
UBE3B-206ENST00000536398 SLC6A19Q695T7 634 aa13.49□□□□□ -0.25
UBE3B-206ENST00000536398 TMEM205Q6UW68 189 aa13.49□□□□□ -0.25
UBE3B-206ENST00000536398 NDUFAF7Q7L592 441 aa13.49□□□□□ -0.25
UBE3B-206ENST00000536398 LRRN4CLQ8ND94 238 aa13.49□□□□□ -0.25
UBE3B-206ENST00000536398 UHMK1Q8TAS1 419 aaKnown RBP13.49□□□□□ -0.25
UBE3B-206ENST00000536398 NT5CQ8TCD5 201 aa13.49□□□□□ -0.25
UBE3B-206ENST00000536398 UTP15Q8TED0 518 aaKnown RBP13.49□□□□□ -0.25
UBE3B-206ENST00000536398 KCTD4Q8WVF5 259 aa13.49□□□□□ -0.25
UBE3B-206ENST00000536398 CYTH2Q99418 400 aa13.49□□□□□ -0.25
UBE3B-206ENST00000536398 AIF1LQ9BQI0 150 aa13.49□□□□□ -0.25
UBE3B-206ENST00000536398 FAM129AQ9BZQ8 928 aa13.49□□□□□ -0.25
UBE3B-206ENST00000536398 VN1R1Q9GZP7 353 aa13.49□□□□□ -0.25
UBE3B-206ENST00000536398 ACSS3Q9H6R3 686 aa13.49□□□□□ -0.25
UBE3B-206ENST00000536398 MTRF1LQ9UGC7 380 aaKnown RBP13.49□□□□□ -0.25
UBE3B-206ENST00000536398 PTBP2Q9UKA9 531 aaKnown RBP13.49□□□□□ -0.25
UBE3B-206ENST00000536398 RNF112Q9ULX5 631 aa13.49□□□□□ -0.25
UBE3B-206ENST00000536398 CSAG2Q9Y5P2 127 aa13.49□□□□□ -0.25
UBE3B-206ENST00000536398 SLC22A7Q9Y694 548 aa13.49□□□□□ -0.25
UBE3B-206ENST00000536398 IGHV1-45A0A0A0MS14 117 aa13.48□□□□□ -0.25
UBE3B-206ENST00000536398 IGHV3-20A0A0C4DH32 117 aa13.48□□□□□ -0.25
UBE3B-206ENST00000536398 UBXN8O00124 270 aa13.48□□□□□ -0.25
UBE3B-206ENST00000536398 GALR3O60755 368 aaPredicted RBP13.48□□□□□ -0.25
UBE3B-206ENST00000536398 DPM1O60762 260 aa13.48□□□□□ -0.25
UBE3B-206ENST00000536398 CDC123O75794 336 aaPredicted RBP13.48□□□□□ -0.25
UBE3B-206ENST00000536398 SORBS2O94875 1100 aaKnown RBP13.48□□□□□ -0.25
UBE3B-206ENST00000536398 HPP00738 406 aa13.48□□□□□ -0.25
UBE3B-206ENST00000536398 C2P06681 752 aa13.48□□□□□ -0.25
UBE3B-206ENST00000536398 LTA4HP09960 611 aaKnown RBP13.48□□□□□ -0.25
UBE3B-206ENST00000536398 GNAZP19086 355 aa13.48□□□□□ -0.25
UBE3B-206ENST00000536398 EPORP19235 508 aa13.48□□□□□ -0.25
UBE3B-206ENST00000536398 AHRP35869 848 aa13.48□□□□□ -0.25
UBE3B-206ENST00000536398 RAB8AP61006 207 aa13.48□□□□□ -0.25
UBE3B-206ENST00000536398 CDC16Q13042 620 aa13.48□□□□□ -0.25
UBE3B-206ENST00000536398 SLBPQ14493 270 aaKnown RBP eCLIP13.48□□□□□ -0.25
UBE3B-206ENST00000536398 PCOLCEQ15113 449 aa13.48□□□□□ -0.25
UBE3B-206ENST00000536398 MINDY4Q4G0A6 757 aa13.48□□□□□ -0.25
UBE3B-206ENST00000536398 GLE1Q53GS7 698 aaKnown RBP13.48□□□□□ -0.25
UBE3B-206ENST00000536398 MFSD4BQ5TF39 518 aa13.48□□□□□ -0.25
UBE3B-206ENST00000536398 SULT1C3Q6IMI6 304 aa13.48□□□□□ -0.25
UBE3B-206ENST00000536398 ADNP2Q6IQ32 1131 aa13.48□□□□□ -0.25
UBE3B-206ENST00000536398 LANCL3Q6ZV70 420 aa13.48□□□□□ -0.25
UBE3B-206ENST00000536398 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.48□□□□□ -0.25
UBE3B-206ENST00000536398 CENPLQ8N0S6 344 aaPredicted RBP13.48□□□□□ -0.25
UBE3B-206ENST00000536398 TBC1D19Q8N5T2 526 aa13.48□□□□□ -0.25
UBE3B-206ENST00000536398 SNX31Q8N9S9 440 aa13.48□□□□□ -0.25
UBE3B-206ENST00000536398 PDPRQ8NCN5 879 aa13.48□□□□□ -0.25
UBE3B-206ENST00000536398 MIB2Q96AX9 1013 aa13.48□□□□□ -0.25
UBE3B-206ENST00000536398 TRIM44Q96DX7 344 aaPredicted RBP13.48□□□□□ -0.25
UBE3B-206ENST00000536398 PEX11GQ96HA9 241 aa13.48□□□□□ -0.25
UBE3B-206ENST00000536398 ATOH8Q96SQ7 321 aa13.48□□□□□ -0.25
UBE3B-206ENST00000536398 FMO2Q99518 471 aa13.48□□□□□ -0.25
UBE3B-206ENST00000536398 CLMPQ9H6B4 373 aa13.48□□□□□ -0.25
UBE3B-206ENST00000536398 NMRAL1Q9HBL8 299 aa13.48□□□□□ -0.25
UBE3B-206ENST00000536398 SNX15Q9NRS6 342 aa13.48□□□□□ -0.25
UBE3B-206ENST00000536398 DNAJC11Q9NVH1 559 aa13.48□□□□□ -0.25
UBE3B-206ENST00000536398 C5AR2Q9P296 337 aa13.48□□□□□ -0.25
UBE3B-206ENST00000536398 ACOT9Q9Y305 439 aa13.48□□□□□ -0.25
UBE3B-206ENST00000536398 LOC102723996A0A087X1L8 192 aa13.47□□□□□ -0.25
UBE3B-206ENST00000536398 NSG1A0A0A6YYJ2 146 aa13.47□□□□□ -0.25
UBE3B-206ENST00000536398 CCNT2O60583 730 aaKnown RBP13.47□□□□□ -0.25
UBE3B-206ENST00000536398 H2AFYO75367 372 aaKnown RBP13.47□□□□□ -0.25
UBE3B-206ENST00000536398 STK16O75716 305 aa13.47□□□□□ -0.25
UBE3B-206ENST00000536398 TBX6O95947 436 aaPredicted RBP13.47□□□□□ -0.25
UBE3B-206ENST00000536398 SMIM10L1P0DMW3 83 aa13.47□□□□□ -0.25
UBE3B-206ENST00000536398 ALOX12P18054 663 aa13.47□□□□□ -0.25
UBE3B-206ENST00000536398 CD22P20273 847 aa13.47□□□□□ -0.25
UBE3B-206ENST00000536398 CXCR2P25025 360 aa13.47□□□□□ -0.25
UBE3B-206ENST00000536398 PHBP35232 272 aa13.47□□□□□ -0.25
UBE3B-206ENST00000536398 GLRBP48167 497 aa13.47□□□□□ -0.25
UBE3B-206ENST00000536398 RGS1Q08116 209 aa13.47□□□□□ -0.25
UBE3B-206ENST00000536398 HERC3Q15034 1050 aa13.47□□□□□ -0.25
UBE3B-206ENST00000536398 TOR1AIP1Q5JTV8 583 aa13.47□□□□□ -0.25
UBE3B-206ENST00000536398 IGFL3Q6UXB1 125 aa13.47□□□□□ -0.25
UBE3B-206ENST00000536398 VN1R5Q7Z5H4 357 aa13.47□□□□□ -0.25
UBE3B-206ENST00000536398 TBC1D1Q86TI0 1168 aaPredicted RBP13.47□□□□□ -0.25
UBE3B-206ENST00000536398 TCAIMQ8N3R3 496 aa13.47□□□□□ -0.25
UBE3B-206ENST00000536398 STAG3L4Q8TBR4 150 aa13.47□□□□□ -0.25
UBE3B-206ENST00000536398 CPT1CQ8TCG5 803 aa13.47□□□□□ -0.25
UBE3B-206ENST00000536398 PSMF1Q92530 271 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms