RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 ZNF490Q9ULM2 529 aaPredicted RBP13.32□□□□□ -0.28
VPS11-205ENST00000534551 LHX6Q9UPM6 363 aa13.32□□□□□ -0.28
VPS11-205ENST00000534551 RNF11Q9Y3C5 154 aa13.32□□□□□ -0.28
VPS11-205ENST00000534551 PTRH2Q9Y3E5 179 aaKnown RBP13.32□□□□□ -0.28
VPS11-205ENST00000534551 CDC14CA4D256 554 aa13.31□□□□□ -0.28
VPS11-205ENST00000534551 CCDC151A5D8V7 595 aa13.31□□□□□ -0.28
VPS11-205ENST00000534551 ZNF891A8MT65 544 aaPredicted RBP13.31□□□□□ -0.28
VPS11-205ENST00000534551 G3V2L1 256 aa13.31□□□□□ -0.28
VPS11-205ENST00000534551 MASP2O00187 686 aa13.31□□□□□ -0.28
VPS11-205ENST00000534551 COPEO14579 308 aa13.31□□□□□ -0.28
VPS11-205ENST00000534551 PLIN3O60664 434 aa13.31□□□□□ -0.28
VPS11-205ENST00000534551 CREG1O75629 220 aa13.31□□□□□ -0.28
VPS11-205ENST00000534551 KLF7O75840 302 aaPredicted RBP13.31□□□□□ -0.28
VPS11-205ENST00000534551 WFS1O76024 890 aa13.31□□□□□ -0.28
VPS11-205ENST00000534551 KLHL18O94889 574 aa13.31□□□□□ -0.28
VPS11-205ENST00000534551 TUBBP07437 444 aa13.31□□□□□ -0.28
VPS11-205ENST00000534551 GSTA1P08263 222 aa13.31□□□□□ -0.28
VPS11-205ENST00000534551 PCNAP12004 261 aa13.31□□□□□ -0.28
VPS11-205ENST00000534551 AHRP35869 848 aa13.31□□□□□ -0.28
VPS11-205ENST00000534551 ARL1P40616 181 aaPredicted RBP13.31□□□□□ -0.28
VPS11-205ENST00000534551 CCR10P46092 362 aa13.31□□□□□ -0.28
VPS11-205ENST00000534551 RAB8AP61006 207 aa13.31□□□□□ -0.28
VPS11-205ENST00000534551 TRAF3Q13114 568 aa13.31□□□□□ -0.28
VPS11-205ENST00000534551 DDX39BQ13838 428 aaKnown RBP13.31□□□□□ -0.28
VPS11-205ENST00000534551 FAM214AQ32MH5 1076 aa13.31□□□□□ -0.28
VPS11-205ENST00000534551 UNC50Q53HI1 259 aa13.31□□□□□ -0.28
VPS11-205ENST00000534551 MRPL14Q6P1L8 145 aaKnown RBP13.31□□□□□ -0.28
VPS11-205ENST00000534551 OR5T3Q8NGG3 340 aa13.31□□□□□ -0.28
VPS11-205ENST00000534551 NT5CQ8TCD5 201 aa13.31□□□□□ -0.28
VPS11-205ENST00000534551 ZNF483Q8TF39 744 aaPredicted RBP13.31□□□□□ -0.28
VPS11-205ENST00000534551 COL26A1Q96A83 441 aa13.31□□□□□ -0.28
VPS11-205ENST00000534551 MMABQ96EY8 250 aaPredicted RBP13.31□□□□□ -0.28
VPS11-205ENST00000534551 SPSB2Q99619 263 aa13.31□□□□□ -0.28
VPS11-205ENST00000534551 TMEM109Q9BVC6 243 aa13.31□□□□□ -0.28
VPS11-205ENST00000534551 ROPN1BQ9BZX4 212 aaPredicted RBP13.31□□□□□ -0.28
VPS11-205ENST00000534551 SLC6A16Q9GZN6 736 aa13.31□□□□□ -0.28
VPS11-205ENST00000534551 CENPHQ9H3R5 247 aa13.31□□□□□ -0.28
VPS11-205ENST00000534551 EHD1Q9H4M9 534 aa13.31□□□□□ -0.28
VPS11-205ENST00000534551 NOL11Q9H8H0 719 aaKnown RBP13.31□□□□□ -0.28
VPS11-205ENST00000534551 IPPKQ9H8X2 491 aa13.31□□□□□ -0.28
VPS11-205ENST00000534551 ACTR8Q9H981 624 aa13.31□□□□□ -0.28
VPS11-205ENST00000534551 ROPN1Q9HAT0 212 aaPredicted RBP13.31□□□□□ -0.28
VPS11-205ENST00000534551 SLC17A7Q9P2U7 560 aa13.31□□□□□ -0.28
VPS11-205ENST00000534551 COPG2Q9UBF2 871 aa13.31□□□□□ -0.28
VPS11-205ENST00000534551 GPN3Q9UHW5 284 aaPredicted RBP13.31□□□□□ -0.28
VPS11-205ENST00000534551 TCFL5Q9UL49 500 aa13.31□□□□□ -0.28
VPS11-205ENST00000534551 FARSAQ9Y285 508 aaKnown RBP13.31□□□□□ -0.28
VPS11-205ENST00000534551 PCDHGA6Q9Y5G7 932 aa13.31□□□□□ -0.28
VPS11-205ENST00000534551 CTIFO43310 598 aaKnown RBP13.3□□□□□ -0.28
VPS11-205ENST00000534551 H2AFYO75367 372 aaKnown RBP13.3□□□□□ -0.28
VPS11-205ENST00000534551 JRKO75564 520 aa13.3□□□□□ -0.28
VPS11-205ENST00000534551 UMODP07911 640 aa13.3□□□□□ -0.28
VPS11-205ENST00000534551 RAB40ALP0C0E4 278 aa13.3□□□□□ -0.28
VPS11-205ENST00000534551 ATP5F1P24539 256 aaPredicted RBP13.3□□□□□ -0.28
VPS11-205ENST00000534551 OTX2P32243 289 aa13.3□□□□□ -0.28
VPS11-205ENST00000534551 CRHR1P34998 444 aa13.3□□□□□ -0.28
VPS11-205ENST00000534551 RPS15P62841 145 aaKnown RBP13.3□□□□□ -0.28
VPS11-205ENST00000534551 HERVK_113P63132 956 aa13.3□□□□□ -0.28
VPS11-205ENST00000534551 RGS1Q08116 209 aa13.3□□□□□ -0.28
VPS11-205ENST00000534551 CHAF1BQ13112 559 aa13.3□□□□□ -0.28
VPS11-205ENST00000534551 E2F2Q14209 437 aa13.3□□□□□ -0.28
VPS11-205ENST00000534551 RBBP7Q16576 425 aa13.3□□□□□ -0.28
VPS11-205ENST00000534551 NKG7Q16617 165 aa13.3□□□□□ -0.28
VPS11-205ENST00000534551 DEFB134Q4QY38 66 aa13.3□□□□□ -0.28
VPS11-205ENST00000534551 VWA2Q5GFL6 755 aa13.3□□□□□ -0.28
VPS11-205ENST00000534551 GARNL3Q5VVW2 1013 aa13.3□□□□□ -0.28
VPS11-205ENST00000534551 CPZQ66K79 652 aa13.3□□□□□ -0.28
VPS11-205ENST00000534551 GRHL2Q6ISB3 625 aa13.3□□□□□ -0.28
VPS11-205ENST00000534551 LETMD1Q6P1Q0 360 aa13.3□□□□□ -0.28
VPS11-205ENST00000534551 ZYG11AQ6WRX3 759 aa13.3□□□□□ -0.28
VPS11-205ENST00000534551 GPR155Q7Z3F1 870 aa13.3□□□□□ -0.28
VPS11-205ENST00000534551 IQCKQ8N0W5 287 aa13.3□□□□□ -0.28
VPS11-205ENST00000534551 KRT78Q8N1N4 520 aa13.3□□□□□ -0.28
VPS11-205ENST00000534551 TBC1D19Q8N5T2 526 aa13.3□□□□□ -0.28
VPS11-205ENST00000534551 BANPQ8N9N5 519 aa13.3□□□□□ -0.28
VPS11-205ENST00000534551 CCDC63Q8NA47 563 aa13.3□□□□□ -0.28
VPS11-205ENST00000534551 UTP15Q8TED0 518 aaKnown RBP13.3□□□□□ -0.28
VPS11-205ENST00000534551 DPH2Q9BQC3 489 aaPredicted RBP13.3□□□□□ -0.28
VPS11-205ENST00000534551 EFCAB11Q9BUY7 163 aa13.3□□□□□ -0.28
VPS11-205ENST00000534551 YIPF2Q9BWQ6 316 aa13.3□□□□□ -0.28
VPS11-205ENST00000534551 ERVK-6Q9BXR3 956 aa13.3□□□□□ -0.28
VPS11-205ENST00000534551 ZNF304Q9HCX3 659 aa13.3□□□□□ -0.28
VPS11-205ENST00000534551 DCDC2Q9UHG0 476 aa13.3□□□□□ -0.28
VPS11-205ENST00000534551 TMCO1Q9UM00 188 aa13.3□□□□□ -0.28
VPS11-205ENST00000534551 NAALAD2Q9Y3Q0 740 aa13.3□□□□□ -0.28
VPS11-205ENST00000534551 BOD1L1Q8NFC6 3051 aa13.3□□□□□ -0.28
VPS11-205ENST00000534551 ZFYVE26Q68DK2 2539 aa13.3□□□□□ -0.28
VPS11-205ENST00000534551 TXNDC9O14530 226 aa13.29□□□□□ -0.28
VPS11-205ENST00000534551 ALOX12BO75342 701 aa13.29□□□□□ -0.28
VPS11-205ENST00000534551 ERLIN1O75477 346 aa13.29□□□□□ -0.28
VPS11-205ENST00000534551 MYL2P10916 166 aa13.29□□□□□ -0.28
VPS11-205ENST00000534551 TAC1P20366 129 aa13.29□□□□□ -0.28
VPS11-205ENST00000534551 EMP3P54852 163 aa13.29□□□□□ -0.28
VPS11-205ENST00000534551 PWP1Q13610 501 aa13.29□□□□□ -0.28
VPS11-205ENST00000534551 DSG2Q14126 1118 aa13.29□□□□□ -0.28
VPS11-205ENST00000534551 PCLAFQ15004 111 aa13.29□□□□□ -0.28
VPS11-205ENST00000534551 TBCCQ15814 346 aa13.29□□□□□ -0.28
VPS11-205ENST00000534551 CPSF6Q16630 551 aaKnown RBP eCLIP13.29□□□□□ -0.28
VPS11-205ENST00000534551 NDUFA9Q16795 377 aa13.29□□□□□ -0.28
VPS11-205ENST00000534551 DEFB109BQ30KR1 87 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms