RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 N6AMT1Q9Y5N5 214 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 SCN2BO60939 215 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 GBAP04062 536 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 NR4A1P22736 598 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 SLC6A4P31645 630 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 SH3BP2P78314 561 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 PPP1R8Q12972 351 aaKnown RBP16.67■□□□□ 0.26
PHRF1-206ENST00000534320 CADM2Q8N3J6 435 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 PNPLA1Q8N8W4 532 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 AASSQ9UDR5 926 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 KLHL33A6NCF5 533 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 NDUFS4O43181 175 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 AIREO43918 545 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 RPL19P84098 196 aaKnown RBP16.67■□□□□ 0.26
PHRF1-206ENST00000534320 TMEM25Q86YD3 366 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 TMEM126BQ8IUX1 230 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 CCDC28AQ8IWP9 274 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 TNFAIP8L1Q8WVP5 186 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 FUBP1Q96AE4 644 aaKnown RBP16.67■□□□□ 0.26
PHRF1-206ENST00000534320 COL21A1Q96P44 957 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 TBCCD1Q9NVR7 557 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 MGAT4AQ9UM21 535 aa16.67■□□□□ 0.26
PHRF1-206ENST00000534320 OR5F1O95221 314 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 IL7RP16871 459 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 ZNF24P17028 368 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 GALNT1Q10472 559 aaPredicted RBP16.66■□□□□ 0.26
PHRF1-206ENST00000534320 SPRED3Q2MJR0 410 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 ITPRIPL2Q3MIP1 535 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 RHPN2P1A8MT19 583 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 ADH1BP00325 375 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 IFI30P13284 250 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 CEACAM7Q14002 265 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 DHCR24Q15392 516 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 TSPAN33Q86UF1 283 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 SLC39A11Q8N1S5 342 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 COX18Q8N8Q8 333 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 GPR150Q8NGU9 434 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 H7C2Y5 167 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 TRIM3O75382 744 aaPredicted RBP16.66■□□□□ 0.26
PHRF1-206ENST00000534320 RIPPLY1Q0D2K3 151 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 TOMM20Q15388 145 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 MINDY4Q4G0A6 757 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 XKR4Q5GH76 650 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 C1orf189Q5VU69 101 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 NOXRED1Q6NXP6 359 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 ZNF248Q8NDW4 579 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 OR52B6Q8NGF0 335 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 GABBR2O75899 941 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 KDM4BO94953 1096 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 PDYNP01213 254 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 ALPPP05187 535 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 HOXD8P13378 290 aaPredicted RBP16.66■□□□□ 0.26
PHRF1-206ENST00000534320 MAGEA8P43361 318 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 CDK6Q00534 326 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 DSC3Q14574 896 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 ABRAXAS2Q15018 415 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 EIF2S3LQ2VIR3 472 aaKnown RBP16.66■□□□□ 0.26
PHRF1-206ENST00000534320 KANK2Q63ZY3 851 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 RTL4Q6ZR62 310 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 KDM1BQ8NB78 822 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 MAPK15Q8TD08 544 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 KCNN1Q92952 543 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 GFM1Q96RP9 751 aaKnown RBP16.66■□□□□ 0.26
PHRF1-206ENST00000534320 DZANK1Q9NVP4 752 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 BMPR1AP36894 532 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 MNDAP41218 407 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 TARDBPQ13148 414 aaKnown RBP eCLIP16.66■□□□□ 0.261e-6■■■■□ 21.6
PHRF1-206ENST00000534320 CCSAPQ6IQ19 270 aaPredicted RBP16.66■□□□□ 0.26
PHRF1-206ENST00000534320 CGB2Q6NT52 195 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 RPTNQ6XPR3 784 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 ZFAND4Q86XD8 727 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 PM20D2Q8IYS1 436 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 CHCHD4Q8N4Q1 142 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 GEMIN6Q8WXD5 167 aaKnown RBP16.66■□□□□ 0.26
PHRF1-206ENST00000534320 KAT8Q9H7Z6 458 aaKnown RBP16.66■□□□□ 0.26
PHRF1-206ENST00000534320 TREX1Q9NSU2 369 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 P2RX2Q9UBL9 471 aa16.66■□□□□ 0.26
PHRF1-206ENST00000534320 RBBP4Q09028 425 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 TMC8Q8IU68 726 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 RBM12BQ8IXT5 1001 aaKnown RBP16.65■□□□□ 0.26
PHRF1-206ENST00000534320 FAM110BQ8TC76 370 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 ASB12Q8WXK4 309 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 SCRN2Q96FV2 425 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 YIPF4Q9BSR8 244 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 ADAP2Q9NPF8 381 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 DUXAA6NLW8 204 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 TIMP1P01033 207 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 SPINT3P49223 89 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 CDKN1CP49918 316 aaPredicted RBP16.65■□□□□ 0.26
PHRF1-206ENST00000534320 ZNF763Q0D2J5 394 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 GRIK2Q13002 908 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 SLC13A2Q13183 592 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 TAF13Q15543 124 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 ANKRD26P1Q6NSI1 321 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 TICAM1Q8IUC6 712 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 LGI4Q8N135 537 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 RAB7BQ96AH8 199 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 SAMD11Q96NU1 681 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 BOCQ9BWV1 1114 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 KLF16Q9BXK1 252 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms