RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 NT5CQ8TCD5 201 aa13.29□□□□□ -0.28
SF3B2-215ENST00000534307 FBXO25Q8TCJ0 367 aa13.29□□□□□ -0.28
SF3B2-215ENST00000534307 SLC5A11Q8WWX8 675 aa13.29□□□□□ -0.28
SF3B2-215ENST00000534307 IMMP1LQ96LU5 166 aa13.29□□□□□ -0.28
SF3B2-215ENST00000534307 GPR22Q99680 433 aa13.29□□□□□ -0.28
SF3B2-215ENST00000534307 ILKAPQ9H0C8 392 aaPredicted RBP13.29□□□□□ -0.28
SF3B2-215ENST00000534307 ZNF700Q9H0M5 742 aa13.29□□□□□ -0.28
SF3B2-215ENST00000534307 CAB39LQ9H9S4 337 aa13.29□□□□□ -0.28
SF3B2-215ENST00000534307 NTNG1Q9Y2I2 539 aa13.29□□□□□ -0.28
SF3B2-215ENST00000534307 MTO1Q9Y2Z2 717 aaKnown RBP13.29□□□□□ -0.28
SF3B2-215ENST00000534307 PDZD2O15018 2839 aa13.29□□□□□ -0.28
SF3B2-215ENST00000534307 NDUFS4O43181 175 aa13.28□□□□□ -0.28
SF3B2-215ENST00000534307 OR1F1O43749 312 aa13.28□□□□□ -0.28
SF3B2-215ENST00000534307 RDH16O75452 317 aa13.28□□□□□ -0.28
SF3B2-215ENST00000534307 CELA2AP08217 269 aa13.28□□□□□ -0.28
SF3B2-215ENST00000534307 GSTA2P09210 222 aa13.28□□□□□ -0.28
SF3B2-215ENST00000534307 CXCR2P25025 360 aa13.28□□□□□ -0.28
SF3B2-215ENST00000534307 AHRP35869 848 aa13.28□□□□□ -0.28
SF3B2-215ENST00000534307 XCR1P46094 333 aa13.28□□□□□ -0.28
SF3B2-215ENST00000534307 SLC6A12P48065 614 aa13.28□□□□□ -0.28
SF3B2-215ENST00000534307 HNMTP50135 292 aa13.28□□□□□ -0.28
SF3B2-215ENST00000534307 EEF1A2Q05639 463 aaKnown RBP13.28□□□□□ -0.28
SF3B2-215ENST00000534307 MFAP5Q13361 173 aa13.28□□□□□ -0.28
SF3B2-215ENST00000534307 ZKSCAN8Q15776 578 aaPredicted RBP13.28□□□□□ -0.28
SF3B2-215ENST00000534307 IRAK1BP1Q5VVH5 260 aa13.28□□□□□ -0.28
SF3B2-215ENST00000534307 ISLR2Q6UXK2 745 aa13.28□□□□□ -0.28
SF3B2-215ENST00000534307 CISD2Q8N5K1 135 aaKnown RBP13.28□□□□□ -0.28
SF3B2-215ENST00000534307 AMER2Q8N7J2 671 aa13.28□□□□□ -0.28
SF3B2-215ENST00000534307 ANKRD53Q8N9V6 530 aa13.28□□□□□ -0.28
SF3B2-215ENST00000534307 OR51Q1Q8NH59 317 aa13.28□□□□□ -0.28
SF3B2-215ENST00000534307 ZCCHC10Q8TBK6 192 aa13.28□□□□□ -0.28
SF3B2-215ENST00000534307 RHBDF1Q96CC6 855 aa13.28□□□□□ -0.28
SF3B2-215ENST00000534307 TSNARE1Q96NA8 513 aa13.28□□□□□ -0.28
SF3B2-215ENST00000534307 LMF1Q96S06 567 aa13.28□□□□□ -0.28
SF3B2-215ENST00000534307 CYTH2Q99418 400 aa13.28□□□□□ -0.28
SF3B2-215ENST00000534307 RBBP8Q99708 897 aa13.28□□□□□ -0.28
SF3B2-215ENST00000534307 CPNE1Q99829 537 aa13.28□□□□□ -0.28
SF3B2-215ENST00000534307 DERL2Q9GZP9 239 aa13.28□□□□□ -0.28
SF3B2-215ENST00000534307 RAB17Q9H0T7 212 aa13.28□□□□□ -0.28
SF3B2-215ENST00000534307 ANKHQ9HCJ1 492 aa13.28□□□□□ -0.28
SF3B2-215ENST00000534307 GPAMQ9HCL2 828 aa13.28□□□□□ -0.28
SF3B2-215ENST00000534307 RIC8BQ9NVN3 520 aa13.28□□□□□ -0.28
SF3B2-215ENST00000534307 ASF1BQ9NVP2 202 aa13.28□□□□□ -0.28
SF3B2-215ENST00000534307 HCN3Q9P1Z3 774 aa13.28□□□□□ -0.28
SF3B2-215ENST00000534307 SLC22A14Q9Y267 594 aa13.28□□□□□ -0.28
SF3B2-215ENST00000534307 UTP11Q9Y3A2 253 aaKnown RBP13.28□□□□□ -0.28
SF3B2-215ENST00000534307 NAALAD2Q9Y3Q0 740 aa13.28□□□□□ -0.28
SF3B2-215ENST00000534307 A1L4Q6 167 aa13.27□□□□□ -0.29
SF3B2-215ENST00000534307 OR2W5A6NFC9 320 aa13.27□□□□□ -0.29
SF3B2-215ENST00000534307 C8orf89P0DMQ9 161 aa13.27□□□□□ -0.29
SF3B2-215ENST00000534307 PLTPP55058 493 aa13.27□□□□□ -0.29
SF3B2-215ENST00000534307 GUCY2DQ02846 1103 aa13.27□□□□□ -0.29
SF3B2-215ENST00000534307 CAV1Q03135 178 aa13.27□□□□□ -0.29
SF3B2-215ENST00000534307 HYAL2Q12891 473 aa13.27□□□□□ -0.29
SF3B2-215ENST00000534307 MRPL49Q13405 166 aaKnown RBP13.27□□□□□ -0.29
SF3B2-215ENST00000534307 CSHL1Q14406 222 aa13.27□□□□□ -0.29
SF3B2-215ENST00000534307 HERC3Q15034 1050 aa13.27□□□□□ -0.29
SF3B2-215ENST00000534307 TGFBIQ15582 683 aa13.27□□□□□ -0.29
SF3B2-215ENST00000534307 ZNF787Q6DD87 383 aa13.27□□□□□ -0.29
SF3B2-215ENST00000534307 NXPE4Q6UWF7 544 aa13.27□□□□□ -0.29
SF3B2-215ENST00000534307 RIPOR1Q6ZS17 1223 aa13.27□□□□□ -0.29
SF3B2-215ENST00000534307 C3orf62Q6ZUJ4 267 aa13.27□□□□□ -0.29
SF3B2-215ENST00000534307 LANCL3Q6ZV70 420 aa13.27□□□□□ -0.29
SF3B2-215ENST00000534307 BRIX1Q8TDN6 353 aaKnown RBP13.27□□□□□ -0.29
SF3B2-215ENST00000534307 SSC4DQ8WTU2 575 aa13.27□□□□□ -0.29
SF3B2-215ENST00000534307 CDKL2Q92772 493 aa13.27□□□□□ -0.29
SF3B2-215ENST00000534307 UBXN10Q96LJ8 280 aa13.27□□□□□ -0.29
SF3B2-215ENST00000534307 EPS8L2Q9H6S3 715 aa13.27□□□□□ -0.29
SF3B2-215ENST00000534307 PELI2Q9HAT8 420 aa13.27□□□□□ -0.29
SF3B2-215ENST00000534307 LANCL2Q9NS86 450 aa13.27□□□□□ -0.29
SF3B2-215ENST00000534307 CTNNAL1Q9UBT7 734 aa13.27□□□□□ -0.29
SF3B2-215ENST00000534307 ZFP69BQ9UJL9 534 aa13.27□□□□□ -0.29
SF3B2-215ENST00000534307 PHGDHO43175 533 aaKnown RBP13.26□□□□□ -0.29
SF3B2-215ENST00000534307 GALR3O60755 368 aaPredicted RBP13.26□□□□□ -0.29
SF3B2-215ENST00000534307 DNAJB6O75190 326 aa13.26□□□□□ -0.29
SF3B2-215ENST00000534307 CBX6O95503 412 aa13.26□□□□□ -0.29
SF3B2-215ENST00000534307 SMIM10L1P0DMW3 83 aa13.26□□□□□ -0.29
SF3B2-215ENST00000534307 ALOX12P18054 663 aa13.26□□□□□ -0.29
SF3B2-215ENST00000534307 IL10P22301 178 aa13.26□□□□□ -0.29
SF3B2-215ENST00000534307 GP5P40197 560 aa13.26□□□□□ -0.29
SF3B2-215ENST00000534307 GDF5P43026 501 aa13.26□□□□□ -0.29
SF3B2-215ENST00000534307 TSFMP43897 325 aaKnown RBP13.26□□□□□ -0.29
SF3B2-215ENST00000534307 USP10Q14694 798 aaKnown RBP13.26□□□□□ -0.29
SF3B2-215ENST00000534307 ZNF169Q14929 603 aaPredicted RBP13.26□□□□□ -0.29
SF3B2-215ENST00000534307 C18orf21Q32NC0 220 aaPredicted RBP13.26□□□□□ -0.29
SF3B2-215ENST00000534307 KBTBD12Q3ZCT8 623 aa13.26□□□□□ -0.29
SF3B2-215ENST00000534307 MINDY4Q4G0A6 757 aa13.26□□□□□ -0.29
SF3B2-215ENST00000534307 FHL5Q5TD97 284 aa13.26□□□□□ -0.29
SF3B2-215ENST00000534307 B3GNTL1Q67FW5 361 aaPredicted RBP13.26□□□□□ -0.29
SF3B2-215ENST00000534307 LINC00696Q6ZRV3 163 aa13.26□□□□□ -0.29
SF3B2-215ENST00000534307 TMPRSS11BQ86T26 416 aa13.26□□□□□ -0.29
SF3B2-215ENST00000534307 SPATA6LQ8N4H0 392 aa13.26□□□□□ -0.29
SF3B2-215ENST00000534307 OR5T3Q8NGG3 340 aa13.26□□□□□ -0.29
SF3B2-215ENST00000534307 DNAJB14Q8TBM8 379 aa13.26□□□□□ -0.29
SF3B2-215ENST00000534307 CREB3L4Q8TEY5 395 aa13.26□□□□□ -0.29
SF3B2-215ENST00000534307 TSPAN17Q96FV3 270 aa13.26□□□□□ -0.29
SF3B2-215ENST00000534307 SMIM10Q96HG1 83 aa13.26□□□□□ -0.29
SF3B2-215ENST00000534307 OR1F2PQ96R84 312 aa13.26□□□□□ -0.29
SF3B2-215ENST00000534307 TUBB6Q9BUF5 446 aa13.26□□□□□ -0.29
SF3B2-215ENST00000534307 SLC29A3Q9BZD2 475 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms