RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-208ENST00000533897 PTCHD3Q3KNS1 767 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 DNAJC14Q6Y2X3 702 aaPredicted RBP4.25□□□□□ -1.73
CTSC-208ENST00000533897 ANKS3Q6ZW76 656 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 USP43Q70EL4 1123 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 HTR3DQ70Z44 454 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 DDX53Q86TM3 631 aaKnown RBP4.25□□□□□ -1.73
CTSC-208ENST00000533897 CYP4Z2PQ8N1L4 340 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 SLC5A8Q8N695 610 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 C1orf52Q8N6N3 182 aaKnown RBP4.25□□□□□ -1.73
CTSC-208ENST00000533897 ATL1Q8WXF7 558 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 REPS1Q96D71 796 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 FAM120BQ96EK7 910 aaKnown RBP4.25□□□□□ -1.73
CTSC-208ENST00000533897 CLPBQ9H078 707 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 RAD18Q9NS91 495 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 MRPS18AQ9NVS2 196 aaKnown RBP4.25□□□□□ -1.73
CTSC-208ENST00000533897 TESQ9UGI8 421 aaKnown RBP4.25□□□□□ -1.73
CTSC-208ENST00000533897 RPS6KA6Q9UK32 745 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 ICKQ9UPZ9 632 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 SF3B6Q9Y3B4 125 aaKnown RBP4.25□□□□□ -1.73
CTSC-208ENST00000533897 GMPPBQ9Y5P6 360 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.25□□□□□ -1.73
CTSC-208ENST00000533897 SLC5A10A0PJK1 596 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 SAGE2PA6NJ88 616 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 MAGEB17A8MXT2 336 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 E7EQ34 232 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 RFXANKO14593 260 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 FPGTO14772 594 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 EIF2S1P05198 315 aaKnown RBP4.25□□□□□ -1.73
CTSC-208ENST00000533897 MSL3P1P0C860 447 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 VASPP50552 380 aaPredicted RBP4.25□□□□□ -1.73
CTSC-208ENST00000533897 SNRPGP62308 76 aaKnown RBP4.25□□□□□ -1.73
CTSC-208ENST00000533897 HYAL2Q12891 473 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 ZNF177Q13360 481 aaPredicted RBP4.25□□□□□ -1.73
CTSC-208ENST00000533897 CLPPQ16740 277 aaPredicted RBP4.25□□□□□ -1.73
CTSC-208ENST00000533897 FBXO43Q4G163 708 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 PERM1Q5SV97 790 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 ZNF648Q5T619 568 aaPredicted RBP4.25□□□□□ -1.73
CTSC-208ENST00000533897 HENMT1Q5T8I9 393 aaKnown RBP4.25□□□□□ -1.73
CTSC-208ENST00000533897 DESI1Q6ICB0 168 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 KLHL17Q6TDP4 642 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 LRRC8DQ7L1W4 858 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 C16orf59Q7L2K0 433 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 NAGSQ8N159 534 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 PIAS4Q8N2W9 510 aaPredicted RBP4.25□□□□□ -1.73
CTSC-208ENST00000533897 FIBINQ8TAL6 211 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 ZNF675Q8TD23 568 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 MSLNLQ96KJ4 702 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 MAGEB10Q96LZ2 347 aaPredicted RBP4.25□□□□□ -1.73
CTSC-208ENST00000533897 FEVQ99581 238 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 APOL4Q9BPW4 351 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 WFDC6Q9BQY6 131 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 TTPALQ9BTX7 342 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 MENTQ9BUN1 341 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 OR51E2Q9H255 320 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 ASB8Q9H765 288 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 C3orf14Q9HBI5 128 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 POLMQ9NP87 494 aaPredicted RBP4.25□□□□□ -1.73
CTSC-208ENST00000533897 SH3BP4Q9P0V3 963 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 SNX6Q9UNH7 406 aa4.25□□□□□ -1.73
CTSC-208ENST00000533897 LRP4O75096 1905 aa4.24□□□□□ -1.73
CTSC-208ENST00000533897 CHD9Q3L8U1 2897 aa4.24□□□□□ -1.73
CTSC-208ENST00000533897 FADS2P1A8MWK0 482 aa4.24□□□□□ -1.73
CTSC-208ENST00000533897 FAM47E-STBD1D6RA91 191 aa4.24□□□□□ -1.73
CTSC-208ENST00000533897 CACNB4O00305 520 aaPredicted RBP4.24□□□□□ -1.73
CTSC-208ENST00000533897 PITPNM1O00562 1244 aa4.24□□□□□ -1.73
CTSC-208ENST00000533897 TBX19O60806 448 aa4.24□□□□□ -1.73
CTSC-208ENST00000533897 SLITRK5O94991 958 aa4.24□□□□□ -1.73
CTSC-208ENST00000533897 LGI1O95970 557 aa4.24□□□□□ -1.73
CTSC-208ENST00000533897 ERGP11308 486 aa4.24□□□□□ -1.73
CTSC-208ENST00000533897 SRCP12931 536 aa4.24□□□□□ -1.73
CTSC-208ENST00000533897 CTSKP43235 329 aa4.24□□□□□ -1.73
CTSC-208ENST00000533897 KIR3DL1P43629 444 aa4.24□□□□□ -1.73
CTSC-208ENST00000533897 ST13P50502 369 aaKnown RBP4.24□□□□□ -1.73
CTSC-208ENST00000533897 LIM2P55344 173 aa4.24□□□□□ -1.73
CTSC-208ENST00000533897 FCHO2Q0JRZ9 810 aa4.24□□□□□ -1.73
CTSC-208ENST00000533897 SF1Q15637 639 aaKnown RBP4.24□□□□□ -1.73
CTSC-208ENST00000533897 Q5BKY6 102 aa4.24□□□□□ -1.73
CTSC-208ENST00000533897 HABP4Q5JVS0 413 aaKnown RBP4.24□□□□□ -1.73
CTSC-208ENST00000533897 ARMC12Q5T9G4 340 aa4.24□□□□□ -1.73
CTSC-208ENST00000533897 NXNL2Q5VZ03 156 aa4.24□□□□□ -1.73
CTSC-208ENST00000533897 SERPINA13PQ6UXR4 307 aa4.24□□□□□ -1.73
CTSC-208ENST00000533897 TPRG1Q6ZUI0 275 aa4.24□□□□□ -1.73
CTSC-208ENST00000533897 ZNF367Q7RTV3 350 aa4.24□□□□□ -1.73
CTSC-208ENST00000533897 FAM9CQ8IZT9 166 aa4.24□□□□□ -1.73
CTSC-208ENST00000533897 ZNF540Q8NDQ6 660 aa4.24□□□□□ -1.73
CTSC-208ENST00000533897 MAL2Q969L2 176 aa4.24□□□□□ -1.73
CTSC-208ENST00000533897 ZNF689Q96CS4 500 aaPredicted RBP4.24□□□□□ -1.73
CTSC-208ENST00000533897 TRNT1Q96Q11 434 aaKnown RBP4.24□□□□□ -1.73
CTSC-208ENST00000533897 VPS35Q96QK1 796 aa4.24□□□□□ -1.73
CTSC-208ENST00000533897 OR5M11Q96RB7 305 aa4.24□□□□□ -1.73
CTSC-208ENST00000533897 ZBTB18Q99592 522 aa4.24□□□□□ -1.73
CTSC-208ENST00000533897 SEPT5Q99719 369 aaPredicted RBP4.24□□□□□ -1.73
CTSC-208ENST00000533897 BHLHE41Q9C0J9 482 aaPredicted RBP4.24□□□□□ -1.73
CTSC-208ENST00000533897 MIXL1Q9H2W2 232 aa4.24□□□□□ -1.73
CTSC-208ENST00000533897 RIBC2Q9H4K1 309 aa4.24□□□□□ -1.73
CTSC-208ENST00000533897 TPT1P8Q9HAU6 139 aa4.24□□□□□ -1.73
CTSC-208ENST00000533897 KRT84Q9NSB2 600 aa4.24□□□□□ -1.73
CTSC-208ENST00000533897 WDR70Q9NW82 654 aa4.24□□□□□ -1.73
CTSC-208ENST00000533897 GPR83Q9NYM4 423 aa4.24□□□□□ -1.73
CTSC-208ENST00000533897 SPASTQ9UBP0 616 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms