RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 PRAMEF17Q5VTA0 474 aa6.8□□□□□ -1.32
CTNND1-236ENST00000533667 LIPJQ5W064 366 aa6.8□□□□□ -1.32
CTNND1-236ENST00000533667 REEP3Q6NUK4 255 aa6.8□□□□□ -1.32
CTNND1-236ENST00000533667 AGTRAPQ6RW13 159 aa6.8□□□□□ -1.32
CTNND1-236ENST00000533667 CEACAM20Q6UY09 585 aa6.8□□□□□ -1.32
CTNND1-236ENST00000533667 UTS2BQ765I0 119 aa6.8□□□□□ -1.32
CTNND1-236ENST00000533667 ZNF367Q7RTV3 350 aa6.8□□□□□ -1.32
CTNND1-236ENST00000533667 DCUN1D3Q8IWE4 304 aa6.8□□□□□ -1.32
CTNND1-236ENST00000533667 AQP11Q8NBQ7 271 aa6.8□□□□□ -1.32
CTNND1-236ENST00000533667 PLEKHO2Q8TD55 490 aa6.8□□□□□ -1.32
CTNND1-236ENST00000533667 NXPE2Q96DL1 559 aa6.8□□□□□ -1.32
CTNND1-236ENST00000533667 DGAT2Q96PD7 388 aa6.8□□□□□ -1.32
CTNND1-236ENST00000533667 TBL1XR1Q9BZK7 514 aa6.8□□□□□ -1.32
CTNND1-236ENST00000533667 Q9N2J8 555 aa6.8□□□□□ -1.32
CTNND1-236ENST00000533667 FAIMQ9NVQ4 179 aa6.8□□□□□ -1.32
CTNND1-236ENST00000533667 SLC2A6Q9UGQ3 507 aa6.8□□□□□ -1.32
CTNND1-236ENST00000533667 UTS2RQ9UKP6 389 aa6.8□□□□□ -1.32
CTNND1-236ENST00000533667 CNOT11Q9UKZ1 510 aaKnown RBP6.8□□□□□ -1.32
CTNND1-236ENST00000533667 PCDHB11Q9Y5F2 797 aa6.8□□□□□ -1.32
CTNND1-236ENST00000533667 A0A096LPI6 279 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 OR2AT4A6NND4 320 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 TMEM233B4DJY2 109 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 ZNF208O43345 1280 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 IFNA21P01568 189 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 CFHP08603 1231 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 GSTT2P0CG29 244 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 HAPLN1P10915 354 aaPredicted RBP6.79□□□□□ -1.32
CTNND1-236ENST00000533667 AHCYP23526 432 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 EDNRAP25101 427 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 PDHA2P29803 388 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 SLC6A6P31641 620 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 ETV1P50549 477 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 ZNF763Q0D2J5 394 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 TRAM2Q15035 370 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 NCEH1Q6PIU2 408 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 TMIGD1Q6UXZ0 262 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 GALNTL5Q7Z4T8 443 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 OR8H3Q8N146 312 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 ARMC10Q8N2F6 343 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 CELF5Q8N6W0 485 aaKnown RBP6.79□□□□□ -1.32
CTNND1-236ENST00000533667 GLIS1Q8NBF1 620 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 NFKBIDQ8NI38 313 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 RFT1Q96AA3 541 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 PYCR2Q96C36 320 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 BORCS6Q96GS4 357 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 SLC2A11Q9BYW1 496 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 TOR3AQ9H497 397 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 MTMR10Q9NXD2 777 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 NDUFAF4Q9P032 175 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 CMAHPQ9Y471 501 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 PCDHGA2Q9Y5H1 932 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 UBR1Q8IWV7 1749 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 ISPDA4D126 451 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 I3L521 148 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 PIRO00625 290 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 SLC31A1O15431 190 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 DFNA5O60443 496 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 ALPIP09923 528 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 MPC1LP0DKB6 136 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 NAT2P11245 290 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 PIM1P11309 404 aaPredicted RBP6.79□□□□□ -1.32
CTNND1-236ENST00000533667 ADH5P11766 374 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 RPL17P18621 184 aaKnown RBP6.79□□□□□ -1.32
CTNND1-236ENST00000533667 HRH2P25021 359 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 ACVRL1P37023 503 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 ACTR1BP42025 376 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 ACTR1AP61163 376 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 RING1Q06587 406 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 FADDQ13158 208 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 PTCHD3Q3KNS1 767 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 ABCA11PQ4W5N1 156 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 C4orf46Q504U0 113 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 CYBRD1Q53TN4 286 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 SFT2D3Q587I9 215 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 CMPK2Q5EBM0 449 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 SPANXN4Q5MJ08 99 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 ZNF782Q6ZMW2 699 aaPredicted RBP6.79□□□□□ -1.32
CTNND1-236ENST00000533667 GID4Q8IVV7 300 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 MARVELD2Q8N4S9 558 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 FBXO15Q8NCQ5 510 aaPredicted RBP6.79□□□□□ -1.32
CTNND1-236ENST00000533667 CCDC54Q8NEL0 328 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 PROKR2Q8NFJ6 384 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 BBS10Q8TAM1 723 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 FAM110BQ8TC76 370 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 FNDC8Q8TC99 324 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 GNPDA2Q8TDQ7 276 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 HCAR2Q8TDS4 363 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 AKAP1Q92667 903 aaKnown RBP eCLIP6.79□□□□□ -1.327e-7■□□□□ 11.3
CTNND1-236ENST00000533667 COQ8BQ96D53 544 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 IL4I1Q96RQ9 567 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 PKP4Q99569 1192 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 SMOQ99835 787 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 SSX3Q99909 188 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 LPIN3Q9BQK8 851 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 ACTL8Q9H568 366 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 METTL8Q9H825 291 aaKnown RBP6.79□□□□□ -1.32
CTNND1-236ENST00000533667 CCM2LQ9NUG4 571 aaPredicted RBP6.79□□□□□ -1.32
CTNND1-236ENST00000533667 PCDHB3Q9Y5E6 796 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 CDH10Q9Y6N8 788 aa6.79□□□□□ -1.32
CTNND1-236ENST00000533667 YKT6O15498 198 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms