RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 ZNF395Q9H8N7 513 aaPredicted RBP16.64■□□□□ 0.25
NXF1-216ENST00000533499 ZNF225Q9UK10 706 aa16.64■□□□□ 0.25
NXF1-216ENST00000533499 PCDHGA3Q9Y5H0 932 aa16.64■□□□□ 0.25
NXF1-216ENST00000533499 SCN3AQ9NY46 2000 aa16.63■□□□□ 0.25
NXF1-216ENST00000533499 A0A0G2JN53 185 aa16.63■□□□□ 0.25
NXF1-216ENST00000533499 TEX51A0A1B0GUA7 166 aa16.63■□□□□ 0.25
NXF1-216ENST00000533499 H0YIV9 168 aa16.63■□□□□ 0.25
NXF1-216ENST00000533499 MANBAO00462 879 aa16.63■□□□□ 0.25
NXF1-216ENST00000533499 AZIN1O14977 448 aa16.63■□□□□ 0.25
NXF1-216ENST00000533499 CPNE3O75131 537 aaKnown RBP16.63■□□□□ 0.25
NXF1-216ENST00000533499 TGFB1P01137 390 aa16.63■□□□□ 0.25
NXF1-216ENST00000533499 HBQ1P09105 142 aa16.63■□□□□ 0.25
NXF1-216ENST00000533499 SERPINB5P36952 375 aa16.63■□□□□ 0.25
NXF1-216ENST00000533499 ARSFP54793 590 aa16.63■□□□□ 0.25
NXF1-216ENST00000533499 FOXA1P55317 472 aa16.63■□□□□ 0.25
NXF1-216ENST00000533499 RAB8AP61006 207 aa16.63■□□□□ 0.25
NXF1-216ENST00000533499 RPS13P62277 151 aaKnown RBP16.63■□□□□ 0.25
NXF1-216ENST00000533499 PCDH1Q08174 1060 aa16.63■□□□□ 0.25
NXF1-216ENST00000533499 BST1Q10588 318 aa16.63■□□□□ 0.25
NXF1-216ENST00000533499 PWP1Q13610 501 aa16.63■□□□□ 0.25
NXF1-216ENST00000533499 SLC9A5Q14940 896 aa16.63■□□□□ 0.25
NXF1-216ENST00000533499 MUM1Q2TAK8 710 aa16.63■□□□□ 0.25
NXF1-216ENST00000533499 PRTGQ2VWP7 1150 aa16.63■□□□□ 0.25
NXF1-216ENST00000533499 GGTA1PQ4G0N0 100 aa16.63■□□□□ 0.25
NXF1-216ENST00000533499 SH2D4BQ5SQS7 431 aa16.63■□□□□ 0.25
NXF1-216ENST00000533499 ERMP1Q7Z2K6 904 aa16.63■□□□□ 0.25
NXF1-216ENST00000533499 LRRC8CQ8TDW0 803 aa16.63■□□□□ 0.25
NXF1-216ENST00000533499 F2RL3Q96RI0 385 aa16.63■□□□□ 0.25
NXF1-216ENST00000533499 SARGQ9BW04 601 aa16.63■□□□□ 0.25
NXF1-216ENST00000533499 YIPF2Q9BWQ6 316 aa16.63■□□□□ 0.25
NXF1-216ENST00000533499 SLC29A3Q9BZD2 475 aa16.63■□□□□ 0.25
NXF1-216ENST00000533499 RHBGQ9H310 441 aa16.63■□□□□ 0.25
NXF1-216ENST00000533499 KLHL31Q9H511 634 aa16.63■□□□□ 0.25
NXF1-216ENST00000533499 SRPK3Q9UPE1 567 aa16.63■□□□□ 0.25
NXF1-216ENST00000533499 MRPS2Q9Y399 296 aaKnown RBP16.63■□□□□ 0.25
NXF1-216ENST00000533499 MAGEB17A8MXT2 336 aa16.62■□□□□ 0.25
NXF1-216ENST00000533499 SAP18O00422 153 aaKnown RBP16.62■□□□□ 0.25
NXF1-216ENST00000533499 NVLO15381 856 aaKnown RBP16.62■□□□□ 0.25
NXF1-216ENST00000533499 ULK1O75385 1050 aa16.62■□□□□ 0.25
NXF1-216ENST00000533499 CLEC3AO75596 197 aa16.62■□□□□ 0.25
NXF1-216ENST00000533499 PDYNP01213 254 aa16.62■□□□□ 0.25
NXF1-216ENST00000533499 SERPINA6P08185 405 aa16.62■□□□□ 0.25
NXF1-216ENST00000533499 ZNF888P0CJ79 500 aaPredicted RBP16.62■□□□□ 0.25
NXF1-216ENST00000533499 IL1RNP18510 177 aa16.62■□□□□ 0.25
NXF1-216ENST00000533499 SERPINB1P30740 379 aa16.62■□□□□ 0.25
NXF1-216ENST00000533499 RAP1GDS1P52306 607 aa16.62■□□□□ 0.25
NXF1-216ENST00000533499 PLA2G16P53816 162 aa16.62■□□□□ 0.25
NXF1-216ENST00000533499 STXBP1P61764 594 aaKnown RBP16.62■□□□□ 0.25
NXF1-216ENST00000533499 E2F2Q14209 437 aa16.62■□□□□ 0.25
NXF1-216ENST00000533499 CES4AQ5XG92 561 aa16.62■□□□□ 0.25
NXF1-216ENST00000533499 VN1R5Q7Z5H4 357 aa16.62■□□□□ 0.25
NXF1-216ENST00000533499 DTWD1Q8N5C7 304 aa16.62■□□□□ 0.25
NXF1-216ENST00000533499 FAM76AQ8TAV0 307 aa16.62■□□□□ 0.25
NXF1-216ENST00000533499 NT5CQ8TCD5 201 aa16.62■□□□□ 0.25
NXF1-216ENST00000533499 CREB3L4Q8TEY5 395 aa16.62■□□□□ 0.25
NXF1-216ENST00000533499 ZNF473Q8WTR7 871 aaKnown RBP16.62■□□□□ 0.25
NXF1-216ENST00000533499 MR1Q95460 341 aa16.62■□□□□ 0.25
NXF1-216ENST00000533499 TM4SF19Q96DZ7 209 aa16.62■□□□□ 0.25
NXF1-216ENST00000533499 FAR2Q96K12 515 aa16.62■□□□□ 0.25
NXF1-216ENST00000533499 ZNF285Q96NJ3 590 aa16.62■□□□□ 0.25
NXF1-216ENST00000533499 OR51B5Q9H339 312 aa16.62■□□□□ 0.25
NXF1-216ENST00000533499 TNFRSF12AQ9NP84 129 aa16.62■□□□□ 0.25
NXF1-216ENST00000533499 ASCL3Q9NQ33 180 aa16.62■□□□□ 0.25
NXF1-216ENST00000533499 DMRT3Q9NQL9 472 aa16.62■□□□□ 0.25
NXF1-216ENST00000533499 FARSBQ9NSD9 589 aaKnown RBP16.62■□□□□ 0.25
NXF1-216ENST00000533499 ADGRE2Q9UHX3 823 aa16.62■□□□□ 0.25
NXF1-216ENST00000533499 PCDHB3Q9Y5E6 796 aa16.62■□□□□ 0.25
NXF1-216ENST00000533499 PCDHGA7Q9Y5G6 932 aa16.62■□□□□ 0.25
NXF1-216ENST00000533499 MAU2Q9Y6X3 613 aa16.62■□□□□ 0.25
NXF1-216ENST00000533499 NCOR2Q9Y618 2525 aa16.62■□□□□ 0.25
NXF1-216ENST00000533499 A0A0A6YYC8 382 aaPredicted RBP16.61■□□□□ 0.25
NXF1-216ENST00000533499 URADA6NGE7 173 aa16.61■□□□□ 0.25
NXF1-216ENST00000533499 TMEM233B4DJY2 109 aa16.61■□□□□ 0.25
NXF1-216ENST00000533499 I3L1I5 382 aaPredicted RBP16.61■□□□□ 0.25
NXF1-216ENST00000533499 ERI3O43414 337 aaKnown RBP16.61■□□□□ 0.25
NXF1-216ENST00000533499 CHEK2O96017 543 aa16.61■□□□□ 0.25
NXF1-216ENST00000533499 B3GALT4O96024 378 aa16.61■□□□□ 0.25
NXF1-216ENST00000533499 KLK3P07288 261 aaPredicted RBP16.61■□□□□ 0.25
NXF1-216ENST00000533499 CCNYL3P0C7X3 344 aa16.61■□□□□ 0.25
NXF1-216ENST00000533499 UROSP10746 265 aa16.61■□□□□ 0.25
NXF1-216ENST00000533499 GSTM2P28161 218 aa16.61■□□□□ 0.25
NXF1-216ENST00000533499 ARRB2P32121 409 aa16.61■□□□□ 0.25
NXF1-216ENST00000533499 HTR6P50406 440 aa16.61■□□□□ 0.25
NXF1-216ENST00000533499 YOD1Q5VVQ6 348 aaPredicted RBP16.61■□□□□ 0.25
NXF1-216ENST00000533499 C6orf15Q6UXA7 325 aaPredicted RBP16.61■□□□□ 0.25
NXF1-216ENST00000533499 CHSY3Q70JA7 882 aa16.61■□□□□ 0.25
NXF1-216ENST00000533499 ABHD13Q7L211 337 aa16.61■□□□□ 0.25
NXF1-216ENST00000533499 DDIASQ8IXT1 998 aa16.61■□□□□ 0.25
NXF1-216ENST00000533499 SLC38A9Q8NBW4 561 aa16.61■□□□□ 0.25
NXF1-216ENST00000533499 WDR20Q8TBZ3 569 aa16.61■□□□□ 0.25
NXF1-216ENST00000533499 ZNF75CPQ92670 426 aaPredicted RBP16.61■□□□□ 0.25
NXF1-216ENST00000533499 COL26A1Q96A83 441 aa16.61■□□□□ 0.25
NXF1-216ENST00000533499 MMABQ96EY8 250 aaPredicted RBP16.61■□□□□ 0.25
NXF1-216ENST00000533499 CMTM7Q96FZ5 175 aa16.61■□□□□ 0.25
NXF1-216ENST00000533499 NAF1Q96HR8 494 aaKnown RBP16.61■□□□□ 0.25
NXF1-216ENST00000533499 C10orf90Q96M02 699 aa16.61■□□□□ 0.25
NXF1-216ENST00000533499 CENPKQ9BS16 269 aa16.61■□□□□ 0.25
NXF1-216ENST00000533499 REXO4Q9GZR2 422 aaKnown RBP16.61■□□□□ 0.25
NXF1-216ENST00000533499 ANKHQ9HCJ1 492 aa16.61■□□□□ 0.25
NXF1-216ENST00000533499 SLC12A4Q9UP95 1085 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms