RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 SFT2D3Q587I9 215 aa16.79■□□□□ 0.28
PCF11-206ENST00000533018 ZNF766Q5HY98 468 aa16.79■□□□□ 0.28
PCF11-206ENST00000533018 FAM45BPQ6NSW5 357 aa16.79■□□□□ 0.28
PCF11-206ENST00000533018 KLHL7Q8IXQ5 586 aa16.79■□□□□ 0.28
PCF11-206ENST00000533018 BEST3Q8N1M1 668 aa16.79■□□□□ 0.28
PCF11-206ENST00000533018 OR5T3Q8NGG3 340 aa16.79■□□□□ 0.28
PCF11-206ENST00000533018 DNAJB8Q8NHS0 232 aa16.79■□□□□ 0.28
PCF11-206ENST00000533018 M1APQ8TC57 530 aa16.79■□□□□ 0.28
PCF11-206ENST00000533018 FAM45AQ8TCE6 357 aa16.79■□□□□ 0.28
PCF11-206ENST00000533018 MOCOSQ96EN8 888 aa16.79■□□□□ 0.28
PCF11-206ENST00000533018 CAPZA3Q96KX2 299 aa16.79■□□□□ 0.28
PCF11-206ENST00000533018 PWWP2AQ96N64 755 aa16.79■□□□□ 0.28
PCF11-206ENST00000533018 ANKRD10Q9NXR5 420 aa16.79■□□□□ 0.28
PCF11-206ENST00000533018 SLC22A7Q9Y694 548 aa16.79■□□□□ 0.28
PCF11-206ENST00000533018 IL10P22301 178 aa16.78■□□□□ 0.28
PCF11-206ENST00000533018 MST1P26927 711 aa16.78■□□□□ 0.28
PCF11-206ENST00000533018 SKP1P63208 163 aa16.78■□□□□ 0.28
PCF11-206ENST00000533018 OLR1P78380 273 aa16.78■□□□□ 0.28
PCF11-206ENST00000533018 PMP22Q01453 160 aa16.78■□□□□ 0.28
PCF11-206ENST00000533018 MEP1AQ16819 746 aa16.78■□□□□ 0.28
PCF11-206ENST00000533018 DEFB134Q4QY38 66 aa16.78■□□□□ 0.28
PCF11-206ENST00000533018 CATSPEREQ5SY80 951 aa16.78■□□□□ 0.28
PCF11-206ENST00000533018 PAPD4Q6PIY7 484 aaKnown RBP16.78■□□□□ 0.28
PCF11-206ENST00000533018 ZNF740Q8NDX6 193 aa16.78■□□□□ 0.28
PCF11-206ENST00000533018 ABHD11Q8NFV4 315 aa16.78■□□□□ 0.28
PCF11-206ENST00000533018 OR56A3Q8NH54 315 aa16.78■□□□□ 0.28
PCF11-206ENST00000533018 TSNARE1Q96NA8 513 aa16.78■□□□□ 0.28
PCF11-206ENST00000533018 OR4K3Q96R72 315 aa16.78■□□□□ 0.28
PCF11-206ENST00000533018 OR1F2PQ96R84 312 aa16.78■□□□□ 0.28
PCF11-206ENST00000533018 LPAR4Q99677 370 aa16.78■□□□□ 0.28
PCF11-206ENST00000533018 UTP23Q9BRU9 249 aaKnown RBP16.78■□□□□ 0.28
PCF11-206ENST00000533018 KLHL1Q9NR64 748 aa16.78■□□□□ 0.28
PCF11-206ENST00000533018 COPG2Q9UBF2 871 aa16.78■□□□□ 0.28
PCF11-206ENST00000533018 SUCOQ9UBS9 1254 aaKnown RBP16.78■□□□□ 0.28
PCF11-206ENST00000533018 SH3BGRL2Q9UJC5 107 aa16.78■□□□□ 0.28
PCF11-206ENST00000533018 CORO1CQ9ULV4 474 aaPredicted RBP16.78■□□□□ 0.28
PCF11-206ENST00000533018 DYRK1BQ9Y463 629 aa16.78■□□□□ 0.28
PCF11-206ENST00000533018 TRBC2A0A5B9 178 aa16.77■□□□□ 0.28
PCF11-206ENST00000533018 ARHGAP10A1A4S6 786 aa16.77■□□□□ 0.28
PCF11-206ENST00000533018 PRSS44E7EML9 344 aa16.77■□□□□ 0.28
PCF11-206ENST00000533018 FAM227AF5H4B4 570 aa16.77■□□□□ 0.28
PCF11-206ENST00000533018 TCP1P17987 556 aaKnown RBP16.77■□□□□ 0.28
PCF11-206ENST00000533018 ALOX12P18054 663 aa16.77■□□□□ 0.28
PCF11-206ENST00000533018 HNF4AP41235 474 aa16.77■□□□□ 0.28
PCF11-206ENST00000533018 OR4D2P58180 307 aa16.77■□□□□ 0.28
PCF11-206ENST00000533018 DR1Q01658 176 aa16.77■□□□□ 0.28
PCF11-206ENST00000533018 RHAGQ02094 409 aa16.77■□□□□ 0.28
PCF11-206ENST00000533018 RBPJQ06330 500 aa16.77■□□□□ 0.28
PCF11-206ENST00000533018 RGS1Q08116 209 aa16.77■□□□□ 0.28
PCF11-206ENST00000533018 PWP1Q13610 501 aa16.77■□□□□ 0.28
PCF11-206ENST00000533018 MORF4L2Q15014 288 aa16.77■□□□□ 0.28
PCF11-206ENST00000533018 ZXDCQ2QGD7 858 aaPredicted RBP16.77■□□□□ 0.28
PCF11-206ENST00000533018 TRMT10BQ6PF06 316 aaKnown RBP16.77■□□□□ 0.28
PCF11-206ENST00000533018 GALNT7Q86SF2 657 aa16.77■□□□□ 0.28
PCF11-206ENST00000533018 CRLF3Q8IUI8 442 aa16.77■□□□□ 0.28
PCF11-206ENST00000533018 ANKMY2Q8IV38 441 aa16.77■□□□□ 0.28
PCF11-206ENST00000533018 CYP4X1Q8N118 509 aa16.77■□□□□ 0.28
PCF11-206ENST00000533018 SLC34A3Q8N130 599 aa16.77■□□□□ 0.28
PCF11-206ENST00000533018 PLPP5Q8NEB5 264 aa16.77■□□□□ 0.28
PCF11-206ENST00000533018 OR4K1Q8NGD4 311 aa16.77■□□□□ 0.28
PCF11-206ENST00000533018 SLC5A11Q8WWX8 675 aa16.77■□□□□ 0.28
PCF11-206ENST00000533018 SLCO2A1Q92959 643 aa16.77■□□□□ 0.28
PCF11-206ENST00000533018 TSLPQ969D9 159 aa16.77■□□□□ 0.28
PCF11-206ENST00000533018 NEIL2Q969S2 332 aa16.77■□□□□ 0.28
PCF11-206ENST00000533018 RELTQ969Z4 430 aa16.77■□□□□ 0.28
PCF11-206ENST00000533018 FBXL8Q96CD0 374 aa16.77■□□□□ 0.28
PCF11-206ENST00000533018 OLFM1Q99784 485 aa16.77■□□□□ 0.28
PCF11-206ENST00000533018 MAGEB17A8MXT2 336 aa16.76■□□□□ 0.27
PCF11-206ENST00000533018 CCL21O00585 134 aa16.76■□□□□ 0.27
PCF11-206ENST00000533018 TTI1O43156 1089 aa16.76■□□□□ 0.27
PCF11-206ENST00000533018 CHST10O43529 356 aa16.76■□□□□ 0.27
PCF11-206ENST00000533018 GALR3O60755 368 aaPredicted RBP16.76■□□□□ 0.27
PCF11-206ENST00000533018 B4GALT2O60909 372 aa16.76■□□□□ 0.27
PCF11-206ENST00000533018 B3GALT4O96024 378 aa16.76■□□□□ 0.27
PCF11-206ENST00000533018 FHP07954 510 aa16.76■□□□□ 0.27
PCF11-206ENST00000533018 ENO2P09104 434 aaPredicted RBP16.76■□□□□ 0.27
PCF11-206ENST00000533018 ZNF888P0CJ79 500 aaPredicted RBP16.76■□□□□ 0.27
PCF11-206ENST00000533018 JAK1P23458 1154 aa16.76■□□□□ 0.27
PCF11-206ENST00000533018 TAS2R50P59544 299 aa16.76■□□□□ 0.27
PCF11-206ENST00000533018 OC90Q02509 493 aaPredicted RBP16.76■□□□□ 0.27
PCF11-206ENST00000533018 TUBA3CQ13748 450 aa16.76■□□□□ 0.27
PCF11-206ENST00000533018 RBBP5Q15291 538 aaKnown RBP16.76■□□□□ 0.27
PCF11-206ENST00000533018 SP5Q6BEB4 398 aaPredicted RBP16.76■□□□□ 0.27
PCF11-206ENST00000533018 H3F3CQ6NXT2 135 aa16.76■□□□□ 0.27
PCF11-206ENST00000533018 TUBA3EQ6PEY2 450 aa16.76■□□□□ 0.27
PCF11-206ENST00000533018 ABHD13Q7L211 337 aa16.76■□□□□ 0.27
PCF11-206ENST00000533018 SLC5A8Q8N695 610 aa16.76■□□□□ 0.27
PCF11-206ENST00000533018 TBC1D20Q96BZ9 403 aa16.76■□□□□ 0.27
PCF11-206ENST00000533018 MMP25Q9NPA2 562 aa16.76■□□□□ 0.27
PCF11-206ENST00000533018 ZFATQ9P243 1243 aa16.76■□□□□ 0.27
PCF11-206ENST00000533018 ZFP69BQ9UJL9 534 aa16.76■□□□□ 0.27
PCF11-206ENST00000533018 PCNX1Q96RV3 2341 aa16.76■□□□□ 0.27
PCF11-206ENST00000533018 DNAJB6O75190 326 aa16.75■□□□□ 0.27
PCF11-206ENST00000533018 IVDP26440 423 aa16.75■□□□□ 0.27
PCF11-206ENST00000533018 EEF1DP29692 281 aaKnown RBP16.75■□□□□ 0.27
PCF11-206ENST00000533018 CD96P40200 585 aa16.75■□□□□ 0.27
PCF11-206ENST00000533018 ITGA8P53708 1063 aa16.75■□□□□ 0.27
PCF11-206ENST00000533018 CASP6P55212 293 aa16.75■□□□□ 0.27
PCF11-206ENST00000533018 ARL4CP56559 192 aa16.75■□□□□ 0.27
PCF11-206ENST00000533018 RAB8AP61006 207 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms