RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 STT3BQ8TCJ2 826 aa13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 ACMSDQ8TDX5 336 aa13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 EPS8L3Q8TE67 593 aaKnown RBP13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 THAP4Q8WY91 577 aa13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 COL26A1Q96A83 441 aa13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 MMABQ96EY8 250 aaPredicted RBP13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 MRPL57Q9BQC6 102 aaKnown RBP13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 CCDC77Q9BR77 488 aa13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 MESP1Q9BRJ9 268 aa13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 TRIM55Q9BYV6 548 aa13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 TGIF2Q9GZN2 237 aa13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 PITHD1Q9GZP4 211 aaPredicted RBP13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 RHBGQ9H310 441 aa13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 GPN3Q9UHW5 284 aaPredicted RBP13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 MAP4K5Q9Y4K4 846 aa13.22□□□□□ -0.29
TSPAN4-220ENST00000532375 GOLGA8RI6L899 631 aa13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 NDUFS4O43181 175 aa13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 H2AFYO75367 372 aaKnown RBP13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 S100BP04271 92 aaPredicted RBP13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 SERPINA6P08185 405 aa13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 ZGLP1P0C6A0 271 aa13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 FAM87AP0C7U9 286 aa13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 PYGBP11216 843 aa13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 IL1RNP18510 177 aa13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 FBLP22087 321 aaKnown RBP13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 CXCR2P25025 360 aa13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 SLCO1A2P46721 670 aa13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 MAT1AQ00266 395 aaKnown RBP13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 CHIT1Q13231 466 aa13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 RBBP5Q15291 538 aaKnown RBP13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 NDUFA9Q16795 377 aa13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 ADPRMQ3LIE5 342 aa13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 XKR6Q5GH73 641 aa13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 METTL2BQ6P1Q9 378 aaKnown RBP13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 SHISA6Q6ZSJ9 500 aa13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.21□□□□□ -0.291e-6■■■■■ 92.8
TSPAN4-220ENST00000532375 LAS2Q8IYD9 372 aa13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 MREGQ8N565 214 aa13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 TEX9Q8N6V9 391 aa13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 PTGR2Q8N8N7 351 aaPredicted RBP13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 SNX31Q8N9S9 440 aa13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 TRPV3Q8NET8 790 aa13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 UTP15Q8TED0 518 aaKnown RBP13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 APOBEC4Q8WW27 367 aaKnown RBP13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 PTCD3Q96EY7 689 aaKnown RBP13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 MRPL46Q9H2W6 279 aaKnown RBP13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 PPCSQ9HAB8 311 aa13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 ZBTB26Q9HCK0 441 aa13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 CPSF2Q9P2I0 782 aaKnown RBP13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 OPTCQ9UBM4 332 aa13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 ZNF282Q9UDV7 671 aaPredicted RBP13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 EMCNQ9ULC0 261 aa13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 PADI2Q9Y2J8 665 aa13.21□□□□□ -0.29
TSPAN4-220ENST00000532375 TLN1Q9Y490 2541 aaKnown RBP13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 BOD1L1Q8NFC6 3051 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 LRIT2A6NDA9 550 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 STX16-NPEPL1H3BU86 382 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 SGK494L7N484 410 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 SOCS6O14544 535 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 OR7A17O14581 309 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 STX16O14662 325 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 CLGNO14967 610 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 KALRNO60229 2985 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 GALR3O60755 368 aaPredicted RBP13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 CLEC3AO75596 197 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 C1QL1O75973 258 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 BMP10O95393 424 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 SLC35G6P0C7Q6 338 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 GFAPP14136 432 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 EPB42P16452 691 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 ALOX12P18054 663 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 MMP11P24347 488 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 HNRNPH1P31943 449 aaKnown RBP13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 FOLR3P41439 243 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 CCR10P46092 362 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 POLE2P56282 527 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 IRF8Q02556 426 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 KLC1Q07866 573 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 ATP1A4Q13733 1029 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 CPZQ66K79 652 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 MRGPREQ86SM8 312 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 LCA5Q86VQ0 697 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 ZC3H7AQ8IWR0 971 aaKnown RBP13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 CNPY4Q8N129 248 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 ZCCHC10Q8TBK6 192 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 SLC39A7Q92504 469 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 NACC2Q96BF6 587 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 PHF21BQ96EK2 531 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 SEC16BQ96JE7 1060 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 EFCAB11Q9BUY7 163 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 C1QTNF3Q9BXJ4 246 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 SOX17Q9H6I2 414 aaPredicted RBP13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 TRPC4Q9UBN4 977 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 NXT1Q9UKK6 140 aaKnown RBP13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 NAALAD2Q9Y3Q0 740 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 TNPO3Q9Y5L0 923 aaKnown RBP13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 HS3ST3B1Q9Y662 390 aa13.2□□□□□ -0.3
TSPAN4-220ENST00000532375 A8MT66 165 aa13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 K7EM74 188 aa13.19□□□□□ -0.3
TSPAN4-220ENST00000532375 MASP2O00187 686 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms