RNA–Protein interactions for RNA: ENST00000532339.1

CD44-235, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-235ENST00000532339 ARHGEF16Q5VV41 709 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 FAM72DQ6L9T8 149 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 WDR73Q6P4I2 378 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 IL27RAQ6UWB1 636 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 HAUS6Q7Z4H7 955 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 SATL1Q86VE3 508 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 FAM228AQ86W67 206 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 FAM72BQ86X60 149 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 KBTBD3Q8NAB2 608 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 APPL2Q8NEU8 664 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 OR13A1Q8NGR1 328 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 SPATA22Q8NHS9 363 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 RPLP0P6Q8NHW5 317 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 MAGEC3Q8TD91 643 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 RLN3Q8WXF3 142 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 FBXO17Q96EF6 278 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 LURAP1Q96LR2 239 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 HARBI1Q96MB7 349 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 CEP295NLQ96MC4 621 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 TTC14Q96N46 770 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 ZNF570Q96NI8 536 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 TAAR1Q96RJ0 339 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 TMEM175Q9BSA9 504 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 PCGF1Q9BSM1 259 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 ADNPQ9H2P0 1102 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 PIGMQ9H3S5 423 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 OSGEPL1Q9H4B0 414 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 PPP1R3EQ9H7J1 279 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 LRRC4Q9HBW1 653 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 ZFP57Q9NU63 452 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 ARHGEF38Q9NXL2 777 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 GTSE1Q9NYZ3 720 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 ERAP1Q9NZ08 941 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 C1RLQ9NZP8 487 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 POU2F3Q9UKI9 436 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 TCF19Q9Y242 345 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 NBEAL2Q6ZNJ1 2754 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 ACANP16112 2415 aa3.64□□□□□ -1.83
CD44-235ENST00000532339 MTCL1Q9Y4B5 1905 aaKnown RBP3.64□□□□□ -1.83
CD44-235ENST00000532339 MYO16Q9Y6X6 1858 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 LOC100509620A0A075B734 347 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 LRRC72A6NJI9 287 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 AKR1B15C9JRZ8 316 aaPredicted RBP3.63□□□□□ -1.83
CD44-235ENST00000532339 ZNF197O14709 1029 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 TRDMT1O14717 391 aaKnown RBP3.63□□□□□ -1.83
CD44-235ENST00000532339 AVILO75366 819 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 PSMD10O75832 226 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 EGFP01133 1207 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 ABCB1P08183 1280 aaPredicted RBP3.63□□□□□ -1.83
CD44-235ENST00000532339 MATKP42679 507 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 CAPZA2P47755 286 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 UQCRFS1P47985 274 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 LIG4P49917 911 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 CRYBB1P53674 252 aaPredicted RBP3.63□□□□□ -1.83
CD44-235ENST00000532339 ASIC1P78348 528 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 DLG2Q15700 870 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 CCDC158Q5M9N0 1113 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 IRAK1BP1Q5VVH5 260 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 SLC36A4Q6YBV0 504 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 B3GNT6Q6ZMB0 384 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 VSIG1Q86XK7 387 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 MCEMP1Q8IX19 187 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 SPATA6LQ8N4H0 392 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 Q8NFD4 153 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 OR8K5Q8NH50 307 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 CCDC26Q8TAB7 109 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 PTPMT1Q8WUK0 201 aaPredicted RBP3.63□□□□□ -1.83
CD44-235ENST00000532339 EXOC4Q96A65 974 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 SGF29Q96ES7 293 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 CCNL2Q96S94 520 aaPredicted RBP3.63□□□□□ -1.83
CD44-235ENST00000532339 HAUS8Q9BT25 410 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 TMEM245Q9H330 911 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 PCDH9Q9HC56 1237 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 PXMP2Q9NR77 195 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 PSD3Q9NYI0 1048 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 WDR35Q9P2L0 1181 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 COPG2Q9UBF2 871 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 KCNS2Q9ULS6 477 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 NOL7Q9UMY1 257 aaKnown RBP3.63□□□□□ -1.83
CD44-235ENST00000532339 PA2G4Q9UQ80 394 aaKnown RBP3.63□□□□□ -1.83
CD44-235ENST00000532339 GAB2Q9UQC2 676 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 ENTPD4Q9Y227 616 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 WBP11Q9Y2W2 641 aaKnown RBP3.63□□□□□ -1.83
CD44-235ENST00000532339 VWA8A3KMH1 1905 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 MN1Q10571 1320 aaPredicted RBP3.63□□□□□ -1.83
CD44-235ENST00000532339 TLN2Q9Y4G6 2542 aa3.63□□□□□ -1.83
CD44-235ENST00000532339 ZNF469Q96JG9 3925 aaPredicted RBP3.63□□□□□ -1.83
CD44-235ENST00000532339 PDCD11Q14690 1871 aaKnown RBP3.62□□□□□ -1.83
CD44-235ENST00000532339 KMT2CQ8NEZ4 4911 aaKnown RBP3.62□□□□□ -1.83
CD44-235ENST00000532339 HEATR9A2RTY3 570 aa3.62□□□□□ -1.83
CD44-235ENST00000532339 MAP2K7O14733 419 aa3.62□□□□□ -1.83
CD44-235ENST00000532339 SLC22A3O75751 556 aa3.62□□□□□ -1.83
CD44-235ENST00000532339 C22orf31O95567 290 aa3.62□□□□□ -1.83
CD44-235ENST00000532339 HIST1H2ABP04908 130 aa3.62□□□□□ -1.83
CD44-235ENST00000532339 MYBL1P10243 752 aa3.62□□□□□ -1.83
CD44-235ENST00000532339 HSPD1P10809 573 aaKnown RBP3.62□□□□□ -1.83
CD44-235ENST00000532339 G6PDP11413 515 aa3.62□□□□□ -1.83
CD44-235ENST00000532339 CD99P14209 185 aa3.62□□□□□ -1.83
CD44-235ENST00000532339 CD1EP15812 388 aa3.62□□□□□ -1.83
CD44-235ENST00000532339 HIST1H2ADP20671 130 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms