RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 APMAPQ9HDC9 416 aa16.84■□□□□ 0.29
CTSB-222ENST00000531551 SIDT1Q9NXL6 827 aaKnown RBP16.84■□□□□ 0.29
CTSB-222ENST00000531551 VTI1BQ9UEU0 232 aa16.84■□□□□ 0.29
CTSB-222ENST00000531551 RARRES3Q9UL19 164 aa16.84■□□□□ 0.29
CTSB-222ENST00000531551 USH1CQ9Y6N9 552 aa16.84■□□□□ 0.29
CTSB-222ENST00000531551 ATP6AP2A0A1C7CYW4 349 aa16.83■□□□□ 0.28
CTSB-222ENST00000531551 GMNCA6NCL1 334 aa16.83■□□□□ 0.28
CTSB-222ENST00000531551 FOXE1O00358 373 aaPredicted RBP16.83■□□□□ 0.28
CTSB-222ENST00000531551 POLR1CO15160 346 aaPredicted RBP16.83■□□□□ 0.28
CTSB-222ENST00000531551 ATP6AP2O75787 350 aa16.83■□□□□ 0.28
CTSB-222ENST00000531551 ETHE1O95571 254 aa16.83■□□□□ 0.28
CTSB-222ENST00000531551 JMJD7P0C870 316 aa16.83■□□□□ 0.28
CTSB-222ENST00000531551 MAPK10P53779 464 aa16.83■□□□□ 0.28
CTSB-222ENST00000531551 ITGA1P56199 1179 aa16.83■□□□□ 0.28
CTSB-222ENST00000531551 PWP1Q13610 501 aa16.83■□□□□ 0.28
CTSB-222ENST00000531551 TOR1AIP1Q5JTV8 583 aa16.83■□□□□ 0.28
CTSB-222ENST00000531551 SPDYAQ5MJ70 313 aa16.83■□□□□ 0.28
CTSB-222ENST00000531551 C10orf62Q5T681 223 aaPredicted RBP16.83■□□□□ 0.28
CTSB-222ENST00000531551 CHSY3Q70JA7 882 aa16.83■□□□□ 0.28
CTSB-222ENST00000531551 CHCHD4Q8N4Q1 142 aa16.83■□□□□ 0.28
CTSB-222ENST00000531551 TM4SF19Q96DZ7 209 aa16.83■□□□□ 0.28
CTSB-222ENST00000531551 SEC16BQ96JE7 1060 aa16.83■□□□□ 0.28
CTSB-222ENST00000531551 MS4A8Q9BY19 250 aa16.83■□□□□ 0.28
CTSB-222ENST00000531551 ACPTQ9BZG2 426 aa16.83■□□□□ 0.28
CTSB-222ENST00000531551 REXO4Q9GZR2 422 aaKnown RBP16.83■□□□□ 0.28
CTSB-222ENST00000531551 KLHL31Q9H511 634 aa16.83■□□□□ 0.28
CTSB-222ENST00000531551 DCTN4Q9UJW0 460 aa16.83■□□□□ 0.28
CTSB-222ENST00000531551 RUVBL1Q9Y265 456 aaKnown RBP16.83■□□□□ 0.28
CTSB-222ENST00000531551 TSC22D4Q9Y3Q8 395 aa16.83■□□□□ 0.28
CTSB-222ENST00000531551 CEP250Q9BV73 2442 aa16.83■□□□□ 0.28
CTSB-222ENST00000531551 SLC28A1O00337 649 aa16.82■□□□□ 0.28
CTSB-222ENST00000531551 RGS14O43566 566 aa16.82■□□□□ 0.28
CTSB-222ENST00000531551 SERPINA6P08185 405 aa16.82■□□□□ 0.28
CTSB-222ENST00000531551 ATXN8OSP0DMR3 200 aa16.82■□□□□ 0.28
CTSB-222ENST00000531551 PTX3P26022 381 aaPredicted RBP16.82■□□□□ 0.28
CTSB-222ENST00000531551 CSTF3Q12996 717 aaKnown RBP16.82■□□□□ 0.28
CTSB-222ENST00000531551 TUBB8Q3ZCM7 444 aa16.82■□□□□ 0.28
CTSB-222ENST00000531551 C3orf38Q5JPI3 329 aa16.82■□□□□ 0.28
CTSB-222ENST00000531551 PRAMEF17Q5VTA0 474 aa16.82■□□□□ 0.28
CTSB-222ENST00000531551 GBP7Q8N8V2 638 aaPredicted RBP16.82■□□□□ 0.28
CTSB-222ENST00000531551 TTC29Q8NA56 475 aaPredicted RBP16.82■□□□□ 0.28
CTSB-222ENST00000531551 LIN37Q96GY3 246 aaPredicted RBP16.82■□□□□ 0.28
CTSB-222ENST00000531551 TRIM55Q9BYV6 548 aa16.82■□□□□ 0.28
CTSB-222ENST00000531551 SLC7A5P2Q9GIP4 190 aa16.82■□□□□ 0.28
CTSB-222ENST00000531551 BRF2Q9HAW0 419 aa16.82■□□□□ 0.28
CTSB-222ENST00000531551 PFDN4Q9NQP4 134 aa16.82■□□□□ 0.28
CTSB-222ENST00000531551 SLC39A1Q9NY26 324 aa16.82■□□□□ 0.28
CTSB-222ENST00000531551 PISDQ9UG56 409 aa16.82■□□□□ 0.28
CTSB-222ENST00000531551 CCDC187A0A096LP49 1063 aa16.82■□□□□ 0.28
CTSB-222ENST00000531551 A0A0G2JN53 185 aa16.82■□□□□ 0.28
CTSB-222ENST00000531551 LRIT2A6NDA9 550 aa16.82■□□□□ 0.28
CTSB-222ENST00000531551 TRPC5OSA6NMA1 111 aa16.82■□□□□ 0.28
CTSB-222ENST00000531551 TXNDC9O14530 226 aa16.82■□□□□ 0.28
CTSB-222ENST00000531551 DIAPH2O60879 1101 aa16.82■□□□□ 0.28
CTSB-222ENST00000531551 TBX6O95947 436 aaPredicted RBP16.82■□□□□ 0.28
CTSB-222ENST00000531551 MSL3P1P0C860 447 aa16.82■□□□□ 0.28
CTSB-222ENST00000531551 TROVE2P10155 538 aaKnown RBP eCLIP16.82■□□□□ 0.28
CTSB-222ENST00000531551 HNRNPH1P31943 449 aaKnown RBP16.82■□□□□ 0.28
CTSB-222ENST00000531551 RAP1GDS1P52306 607 aa16.82■□□□□ 0.28
CTSB-222ENST00000531551 PLA2G16P53816 162 aa16.82■□□□□ 0.28
CTSB-222ENST00000531551 AQP5P55064 265 aa16.82■□□□□ 0.28
CTSB-222ENST00000531551 RAB8AP61006 207 aa16.82■□□□□ 0.28
CTSB-222ENST00000531551 STXBP1P61764 594 aaKnown RBP16.82■□□□□ 0.28
CTSB-222ENST00000531551 NR6A1Q15406 480 aa16.82■□□□□ 0.28
CTSB-222ENST00000531551 KHDRBS2Q5VWX1 349 aaKnown RBP16.82■□□□□ 0.28
CTSB-222ENST00000531551 CPLX4Q7Z7G2 160 aa16.82■□□□□ 0.28
CTSB-222ENST00000531551 PPP1R3BQ86XI6 285 aa16.82■□□□□ 0.28
CTSB-222ENST00000531551 HOMEZQ8IX15 550 aa16.82■□□□□ 0.28
CTSB-222ENST00000531551 GALNT15Q8N3T1 639 aa16.82■□□□□ 0.28
CTSB-222ENST00000531551 NT5CQ8TCD5 201 aa16.82■□□□□ 0.28
CTSB-222ENST00000531551 C3orf30Q96M34 536 aa16.82■□□□□ 0.28
CTSB-222ENST00000531551 SERPINI1Q99574 410 aa16.82■□□□□ 0.28
CTSB-222ENST00000531551 CENPKQ9BS16 269 aa16.82■□□□□ 0.28
CTSB-222ENST00000531551 VPS29Q9UBQ0 182 aa16.82■□□□□ 0.28
CTSB-222ENST00000531551 WDFY3Q8IZQ1 3526 aa16.81■□□□□ 0.28
CTSB-222ENST00000531551 GOLGA8QA0A0J9YX86 632 aa16.81■□□□□ 0.28
CTSB-222ENST00000531551 PMS2P1A4D2B8 440 aa16.81■□□□□ 0.28
CTSB-222ENST00000531551 GOLGA8OA6NCC3 632 aa16.81■□□□□ 0.28
CTSB-222ENST00000531551 GOLGA8NF8WBI6 632 aa16.81■□□□□ 0.28
CTSB-222ENST00000531551 PLD2O14939 933 aa16.81■□□□□ 0.28
CTSB-222ENST00000531551 ZSCAN9O15535 394 aaPredicted RBP16.81■□□□□ 0.28
CTSB-222ENST00000531551 ERI3O43414 337 aaKnown RBP16.81■□□□□ 0.28
CTSB-222ENST00000531551 HSD3B1P14060 373 aa16.81■□□□□ 0.28
CTSB-222ENST00000531551 HSD3B2P26439 372 aa16.81■□□□□ 0.28
CTSB-222ENST00000531551 HK2P52789 917 aa16.81■□□□□ 0.28
CTSB-222ENST00000531551 MC2RQ01718 297 aa16.81■□□□□ 0.28
CTSB-222ENST00000531551 ZNF33BQ06732 778 aa16.81■□□□□ 0.28
CTSB-222ENST00000531551 HYAL2Q12891 473 aa16.81■□□□□ 0.28
CTSB-222ENST00000531551 GRM7Q14831 915 aa16.81■□□□□ 0.28
CTSB-222ENST00000531551 GALNTL6Q49A17 601 aa16.81■□□□□ 0.28
CTSB-222ENST00000531551 DEPDC1Q5TB30 811 aa16.81■□□□□ 0.28
CTSB-222ENST00000531551 CYB5D1Q6P9G0 228 aa16.81■□□□□ 0.28
CTSB-222ENST00000531551 MAVSQ7Z434 540 aa16.81■□□□□ 0.28
CTSB-222ENST00000531551 TRIM46Q7Z4K8 759 aa16.81■□□□□ 0.28
CTSB-222ENST00000531551 TMEM126BQ8IUX1 230 aa16.81■□□□□ 0.28
CTSB-222ENST00000531551 BMPERQ8N8U9 685 aa16.81■□□□□ 0.28
CTSB-222ENST00000531551 OR2T11Q8NH01 316 aa16.81■□□□□ 0.28
CTSB-222ENST00000531551 RFWD2Q8NHY2 731 aa16.81■□□□□ 0.28
CTSB-222ENST00000531551 TUBGCP3Q96CW5 907 aa16.81■□□□□ 0.28
CTSB-222ENST00000531551 SLC6A16Q9GZN6 736 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms