RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 ABI3Q9P2A4 366 aa8.61□□□□□ -1.03
CMTM1-210ENST00000528441 NOVA2Q9UNW9 492 aaKnown RBP8.61□□□□□ -1.03
CMTM1-210ENST00000528441 MRPS2Q9Y399 296 aaKnown RBP8.61□□□□□ -1.03
CMTM1-210ENST00000528441 NAALAD2Q9Y3Q0 740 aa8.61□□□□□ -1.03
CMTM1-210ENST00000528441 ATMQ13315 3056 aa8.61□□□□□ -1.03
CMTM1-210ENST00000528441 A0A088AWK7 358 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 ANKDD1BA6NHY2 528 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 VSTM2BA6NLU5 285 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 A8MUI8 341 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 FOXS1O43638 330 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 LCMT2O60294 686 aaKnown RBP8.6□□□□□ -1.03
CMTM1-210ENST00000528441 B4GALT2O60909 372 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 JRKO75564 520 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 CEACAM4O75871 244 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 FAM155BO75949 473 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 SEC24DO94855 1032 aaPredicted RBP8.6□□□□□ -1.03
CMTM1-210ENST00000528441 AGFG2O95081 481 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 ACSL3O95573 720 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 TSPAN12O95859 305 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 INHBAP08476 426 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 ZNF888P0CJ79 500 aaPredicted RBP8.6□□□□□ -1.03
CMTM1-210ENST00000528441 PCNAP12004 261 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 GFAPP14136 432 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 CD46P15529 392 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 NPPBP16860 134 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 GNAZP19086 355 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 ZNF10P21506 573 aaPredicted RBP8.6□□□□□ -1.03
CMTM1-210ENST00000528441 JAK1P23458 1154 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 GDF5P43026 501 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 HSPA7P48741 367 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 RAB8AP61006 207 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 STXBP1P61764 594 aaKnown RBP8.6□□□□□ -1.03
CMTM1-210ENST00000528441 NAB1Q13506 487 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 BMPR2Q13873 1038 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 SLBPQ14493 270 aaKnown RBP eCLIP8.6□□□□□ -1.03
CMTM1-210ENST00000528441 TGFBIQ15582 683 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 INPP5JQ15735 1006 aaPredicted RBP8.6□□□□□ -1.03
CMTM1-210ENST00000528441 HIST2H2ACQ16777 129 aaPredicted RBP8.6□□□□□ -1.03
CMTM1-210ENST00000528441 BTBD16Q32M84 506 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 DEFB134Q4QY38 66 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 XKR6Q5GH73 641 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 HIST2H2AA3Q6FI13 130 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 NIPAL1Q6NVV3 410 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 KLC3Q6P597 504 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 NXPE4Q6UWF7 544 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 SBSNQ6UWP8 590 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 TMEM207Q6UWW9 146 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 ISLR2Q6UXK2 745 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 NDUFAF7Q7L592 441 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 PRSS41Q7RTY9 318 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 VN1R4Q7Z5H5 301 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 CMC1Q7Z7K0 106 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 TMEM151BQ8IW70 566 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 ZC3H7AQ8IWR0 971 aaKnown RBP8.6□□□□□ -1.03
CMTM1-210ENST00000528441 CISD2Q8N5K1 135 aaKnown RBP8.6□□□□□ -1.03
CMTM1-210ENST00000528441 ARMC2Q8NEN0 867 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 TRPV3Q8NET8 790 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 OR11G2Q8NGC1 345 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 KIF18AQ8NI77 898 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 BRIX1Q8TDN6 353 aaKnown RBP8.6□□□□□ -1.03
CMTM1-210ENST00000528441 ANKRD49Q8WVL7 239 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 SCYL1Q96KG9 808 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 FMO2Q99518 471 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 GPR22Q99680 433 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 SMAD5Q99717 465 aaKnown RBP8.6□□□□□ -1.03
CMTM1-210ENST00000528441 WDR77Q9BQA1 342 aaPredicted RBP8.6□□□□□ -1.03
CMTM1-210ENST00000528441 TMUB1Q9BVT8 246 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 CAPS2Q9BXY5 557 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 DERL2Q9GZP9 239 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 VPS11Q9H270 941 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 ALG9Q9H6U8 611 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 ZNF552Q9H707 407 aaPredicted RBP8.6□□□□□ -1.03
CMTM1-210ENST00000528441 PLAC1Q9HBJ0 212 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 AGPAT4Q9NRZ5 378 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 DNAJC11Q9NVH1 559 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 TEKT2Q9UIF3 430 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 IKZF3Q9UKT9 509 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 B3GNT3Q9Y2A9 372 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 ZNF462Q96JM2 2506 aa8.6□□□□□ -1.03
CMTM1-210ENST00000528441 IGHV3-20A0A0C4DH32 117 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 A0A0G2JN53 185 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 FAM159BA6NKW6 160 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 POC1B-GALNT4F8VUJ3 575 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 STK16O75716 305 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 BMP10O95393 424 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 F10P00742 488 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 LTA4HP09960 611 aaKnown RBP8.59□□□□□ -1.03
CMTM1-210ENST00000528441 MYBL2P10244 700 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 ICAM2P13598 275 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 CD1DP15813 335 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 ALOX12P18054 663 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 TFEBP19484 476 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 GNLYP22749 145 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 CRABP2P29373 138 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 TYK2P29597 1187 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 HPDP32754 393 aaPredicted RBP8.59□□□□□ -1.03
CMTM1-210ENST00000528441 SLC26A3P40879 764 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 AGTR2P50052 363 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 OR4D2P58180 307 aa8.59□□□□□ -1.03
CMTM1-210ENST00000528441 TAS2R50P59544 299 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms