RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 HPDP32754 393 aaPredicted RBP12.7□□□□□ -0.38
CAPN1-215ENST00000528396 ARL1P40616 181 aaPredicted RBP12.7□□□□□ -0.38
CAPN1-215ENST00000528396 HNF4AP41235 474 aa12.7□□□□□ -0.38
CAPN1-215ENST00000528396 PGDP52209 483 aa12.7□□□□□ -0.38
CAPN1-215ENST00000528396 STXBP1P61764 594 aaKnown RBP12.7□□□□□ -0.38
CAPN1-215ENST00000528396 IRF8Q02556 426 aa12.7□□□□□ -0.38
CAPN1-215ENST00000528396 PFKFB4Q16877 469 aa12.7□□□□□ -0.38
CAPN1-215ENST00000528396 MINDY4Q4G0A6 757 aa12.7□□□□□ -0.38
CAPN1-215ENST00000528396 VWA2Q5GFL6 755 aa12.7□□□□□ -0.38
CAPN1-215ENST00000528396 TMIGD1Q6UXZ0 262 aa12.7□□□□□ -0.38
CAPN1-215ENST00000528396 SLCO4C1Q6ZQN7 724 aa12.7□□□□□ -0.38
CAPN1-215ENST00000528396 PPP1R32Q7Z5V6 425 aa12.7□□□□□ -0.38
CAPN1-215ENST00000528396 ZNF843Q8N446 348 aa12.7□□□□□ -0.38
CAPN1-215ENST00000528396 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.7□□□□□ -0.38
CAPN1-215ENST00000528396 TM4SF19Q96DZ7 209 aa12.7□□□□□ -0.38
CAPN1-215ENST00000528396 FAR2Q96K12 515 aa12.7□□□□□ -0.38
CAPN1-215ENST00000528396 ATOH8Q96SQ7 321 aa12.7□□□□□ -0.38
CAPN1-215ENST00000528396 SPSB2Q99619 263 aa12.7□□□□□ -0.38
CAPN1-215ENST00000528396 EFCAB11Q9BUY7 163 aa12.7□□□□□ -0.38
CAPN1-215ENST00000528396 SARGQ9BW04 601 aa12.7□□□□□ -0.38
CAPN1-215ENST00000528396 TRIM55Q9BYV6 548 aa12.7□□□□□ -0.38
CAPN1-215ENST00000528396 PITHD1Q9GZP4 211 aaPredicted RBP12.7□□□□□ -0.38
CAPN1-215ENST00000528396 HCN3Q9P1Z3 774 aa12.7□□□□□ -0.38
CAPN1-215ENST00000528396 PSMC3IPQ9P2W1 217 aaPredicted RBP12.7□□□□□ -0.38
CAPN1-215ENST00000528396 MRPS2Q9Y399 296 aaKnown RBP12.7□□□□□ -0.38
CAPN1-215ENST00000528396 NAALAD2Q9Y3Q0 740 aa12.7□□□□□ -0.38
CAPN1-215ENST00000528396 SLC22A7Q9Y694 548 aa12.7□□□□□ -0.38
CAPN1-215ENST00000528396 SMG1Q96Q15 3661 aaKnown RBP12.7□□□□□ -0.38
CAPN1-215ENST00000528396 ANKDD1BA6NHY2 528 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 VSTM2BA6NLU5 285 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 IDSB3KWA1 339 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 K7EPI3 171 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 AGPSO00116 658 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 MAP2K7O14733 419 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 FOXS1O43638 330 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 KLHL41O60662 606 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 SLU7O95391 586 aaKnown RBP12.69□□□□□ -0.38
CAPN1-215ENST00000528396 UQCRHP07919 91 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 ZNF888P0CJ79 500 aaPredicted RBP12.69□□□□□ -0.38
CAPN1-215ENST00000528396 COL6A2P12110 1019 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 ACPPP15309 386 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 EPB42P16452 691 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 ALOX12P18054 663 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 GSTM2P28161 218 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 TNFRSF8P28908 595 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 KCNC1P48547 511 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 PIK3CGP48736 1102 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 EMP2P54851 167 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 ALDH18A1P54886 795 aaKnown RBP12.69□□□□□ -0.38
CAPN1-215ENST00000528396 MAT1AQ00266 395 aaKnown RBP12.69□□□□□ -0.38
CAPN1-215ENST00000528396 LAPTM5Q13571 262 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 SYT16Q17RD7 645 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 DEFB134Q4QY38 66 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 DCAF10Q5QP82 559 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 ASB18Q6ZVZ8 466 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 PRICKLE2Q7Z3G6 844 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 ZNF605Q86T29 641 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 MYLK4Q86YV6 388 aaPredicted RBP12.69□□□□□ -0.38
CAPN1-215ENST00000528396 TEX9Q8N6V9 391 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 AMER3Q8N944 861 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 OR51Q1Q8NH59 317 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 NT5CQ8TCD5 201 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 UBTD2Q8WUN7 234 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 METTL21AQ8WXB1 218 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 UBE2E3Q969T4 207 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 MOCOSQ96EN8 888 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 PTCD3Q96EY7 689 aaKnown RBP12.69□□□□□ -0.38
CAPN1-215ENST00000528396 SPNS1Q9H2V7 528 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 EHD1Q9H4M9 534 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 ATP13A2Q9NQ11 1180 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 GPR83Q9NYM4 423 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 FBXL4Q9UKA2 621 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 MKL2Q9ULH7 1088 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 TMCO1Q9UM00 188 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 TP53TG5Q9Y2B4 290 aa12.69□□□□□ -0.38
CAPN1-215ENST00000528396 TNPO3Q9Y5L0 923 aaKnown RBP12.69□□□□□ -0.38
CAPN1-215ENST00000528396 A0A088AWK7 358 aa12.68□□□□□ -0.38
CAPN1-215ENST00000528396 ZNF860A6NHJ4 632 aa12.68□□□□□ -0.38
CAPN1-215ENST00000528396 B8ZZF3 427 aa12.68□□□□□ -0.38
CAPN1-215ENST00000528396 RDH16O75452 317 aa12.68□□□□□ -0.38
CAPN1-215ENST00000528396 ALPPP05187 535 aa12.68□□□□□ -0.38
CAPN1-215ENST00000528396 SERPINA6P08185 405 aa12.68□□□□□ -0.38
CAPN1-215ENST00000528396 ZNF10P21506 573 aaPredicted RBP12.68□□□□□ -0.38
CAPN1-215ENST00000528396 ITGA3P26006 1051 aa12.68□□□□□ -0.38
CAPN1-215ENST00000528396 MAGEA12P43365 314 aa12.68□□□□□ -0.38
CAPN1-215ENST00000528396 XCR1P46094 333 aa12.68□□□□□ -0.38
CAPN1-215ENST00000528396 AGTR2P50052 363 aa12.68□□□□□ -0.38
CAPN1-215ENST00000528396 CHIT1Q13231 466 aa12.68□□□□□ -0.38
CAPN1-215ENST00000528396 DOC2AQ14183 400 aa12.68□□□□□ -0.38
CAPN1-215ENST00000528396 SETDB1Q15047 1291 aa12.68□□□□□ -0.38
CAPN1-215ENST00000528396 TUBB8Q3ZCM7 444 aa12.68□□□□□ -0.38
CAPN1-215ENST00000528396 TOR1AIP1Q5JTV8 583 aa12.68□□□□□ -0.38
CAPN1-215ENST00000528396 TCTN3Q6NUS6 607 aa12.68□□□□□ -0.38
CAPN1-215ENST00000528396 PRSS41Q7RTY9 318 aa12.68□□□□□ -0.38
CAPN1-215ENST00000528396 PTRH1Q86Y79 214 aaKnown RBP12.68□□□□□ -0.38
CAPN1-215ENST00000528396 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.68□□□□□ -0.38
CAPN1-215ENST00000528396 ARHGEF39Q8N4T4 335 aa12.68□□□□□ -0.38
CAPN1-215ENST00000528396 ANKRD53Q8N9V6 530 aa12.68□□□□□ -0.38
CAPN1-215ENST00000528396 ISL2Q96A47 359 aa12.68□□□□□ -0.38
CAPN1-215ENST00000528396 SEC16BQ96JE7 1060 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms