RNA–Protein interactions for RNA: ENST00000528149.5

CCDC90B-210, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-210ENST00000528149 LIPMQ5VYY2 423 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 FRMPD2BQ6IN97 320 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 PWWP2BQ6NUJ5 590 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 ZCCHC23Q6ZST2 131 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 DTX1Q86Y01 620 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 MYLK4Q86YV6 388 aaPredicted RBP11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 DNAJC22Q8N4W6 341 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 SLC38A9Q8NBW4 561 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 ZNF740Q8NDX6 193 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 ABHD11Q8NFV4 315 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 OR52B6Q8NGF0 335 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 C9orf43Q8TAL5 461 aaPredicted RBP11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 PPP4R1Q8TF05 950 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 CCDC126Q96EE4 140 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 TCTN2Q96GX1 697 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 PAIP2Q9BPZ3 127 aaKnown RBP11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 C1QTNF3Q9BXJ4 246 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 GSTO2Q9H4Y5 243 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 PELI2Q9HAT8 420 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 TMEM184CQ9NVA4 438 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 OXSMQ9NWU1 459 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 NKIRAS1Q9NYS0 192 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 AKAP7Q9P0M2 348 aaPredicted RBP11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 PILRAQ9UKJ1 303 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 SNX7Q9UNH6 387 aa11.03□□□□□ -0.64
CCDC90B-210ENST00000528149 LOC105369274A0A096LPK9 316 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 LOC102723532A0A0G2JNH3 316 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 A0A1B0GTL3 188 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 PPP6CO00743 305 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 MAP3K7O43318 606 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 RAD1O60671 282 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 TRIM13O60858 407 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 KATNA1O75449 491 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 STK17BO94768 372 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 KIAA0754O94854 1291 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 MED26O95402 600 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 BPGMP07738 259 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 C1GALT1C1LP0DN25 315 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 LIFP15018 202 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 IMPDH1P20839 514 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 BCL6P41182 706 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 CCNG1P51959 295 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 NAGLUP54802 743 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 WDR4P57081 412 aaKnown RBP11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 DNAJB13P59910 316 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 IRF8Q02556 426 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 CLCQ05315 142 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 TRAF3Q13114 568 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 DOC2AQ14183 400 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 CFAP157Q5JU67 520 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 FHL5Q5TD97 284 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 HHATQ5VTY9 493 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 ATG9BQ674R7 924 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 METTL2BQ6P1Q9 378 aaKnown RBP11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 FAM199XQ6PEV8 388 aaPredicted RBP11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 FRMD7Q6ZUT3 714 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 OR4N4Q8N0Y3 316 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 GALNT6Q8NCL4 622 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 OR1L3Q8NH93 324 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 TRPC4APQ8TEL6 797 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 N4BP2L2Q92802 583 aaPredicted RBP11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 NKD1Q969G9 470 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 ZUFSPQ96AP4 578 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 CDK15Q96Q40 435 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 TAAR9Q96RI9 348 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 ZFYVE21Q9BQ24 234 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 AIF1LQ9BQI0 150 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 GATA5Q9BWX5 397 aaPredicted RBP11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 NOL11Q9H8H0 719 aaKnown RBP11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 IPPKQ9H8X2 491 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 ACTR8Q9H981 624 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 FANCEQ9HB96 536 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 FGF21Q9NSA1 209 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 IRAK4Q9NWZ3 460 aa11.02□□□□□ -0.65
CCDC90B-210ENST00000528149 TRBC2A0A5B9 178 aa11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 B4E171 279 aa11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 H0YGG7 62 aa11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 HAX1O00165 279 aa11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 P2RX6O15547 441 aa11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 ATP8B1O43520 1251 aa11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 OR1F1O43749 312 aa11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 SEMA7AO75326 666 aa11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 DLGAP3O95886 979 aa11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 NR1D1P20393 614 aa11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 HRH2P25021 359 aa11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 TSPAN7P41732 249 aa11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 MLLT10P55197 1068 aa11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 VSX2P58304 361 aaPredicted RBP11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 ARF3P61204 181 aaPredicted RBP11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 RPS15AP62244 130 aaKnown RBP11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 ACY1Q03154 408 aa11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 ESPL1Q14674 2120 aa11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 CHI3L2Q15782 390 aa11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 HSP90B2PQ58FF3 399 aa11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 CES4AQ5XG92 561 aa11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 ADNP2Q6IQ32 1131 aa11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 LETMD1Q6P1Q0 360 aa11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 SYVN1Q86TM6 617 aa11.01□□□□□ -0.65
CCDC90B-210ENST00000528149 NUDCD3Q8IVD9 361 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms