RNA–Protein interactions for RNA: ENST00000528142.5

VPS28-209, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS28, Length 1,821 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-209ENST00000528142 UQCRBP14927 111 aa19.83■□□□□ 0.77
VPS28-209ENST00000528142 POLE2P56282 527 aa19.83■□□□□ 0.77
VPS28-209ENST00000528142 ZP2Q05996 745 aa19.83■□□□□ 0.77
VPS28-209ENST00000528142 PDE7AQ13946 482 aa19.83■□□□□ 0.77
VPS28-209ENST00000528142 KIAA0895LQ68EN5 471 aa19.83■□□□□ 0.77
VPS28-209ENST00000528142 FAM71E1Q6IPT2 247 aa19.83■□□□□ 0.77
VPS28-209ENST00000528142 IRGCQ6NXR0 463 aa19.83■□□□□ 0.77
VPS28-209ENST00000528142 ZNF551Q7Z340 670 aaPredicted RBP19.83■□□□□ 0.77
VPS28-209ENST00000528142 ABI3BPQ7Z7G0 1075 aa19.83■□□□□ 0.77
VPS28-209ENST00000528142 MICU2Q8IYU8 434 aa19.83■□□□□ 0.77
VPS28-209ENST00000528142 PPWD1Q96BP3 646 aaKnown RBP19.83■□□□□ 0.77
VPS28-209ENST00000528142 PHF12Q96QT6 1004 aa19.83■□□□□ 0.77
VPS28-209ENST00000528142 TBCDQ9BTW9 1192 aa19.83■□□□□ 0.77
VPS28-209ENST00000528142 ZNF717Q9BY31 904 aaPredicted RBP19.83■□□□□ 0.77
VPS28-209ENST00000528142 A6NCN8 305 aa19.83■□□□□ 0.76
VPS28-209ENST00000528142 PRAMEF26H0Y7S4 382 aa19.83■□□□□ 0.76
VPS28-209ENST00000528142 PLPP1O14494 284 aa19.83■□□□□ 0.76
VPS28-209ENST00000528142 TPP2P29144 1249 aaPredicted RBP19.83■□□□□ 0.76
VPS28-209ENST00000528142 CYP4F2P78329 520 aa19.83■□□□□ 0.76
VPS28-209ENST00000528142 ABHD18Q0P651 414 aa19.83■□□□□ 0.76
VPS28-209ENST00000528142 SLC14A1Q13336 389 aa19.83■□□□□ 0.76
VPS28-209ENST00000528142 ZNF385BQ569K4 471 aa19.83■□□□□ 0.76
VPS28-209ENST00000528142 ANXA8L1Q5VT79 327 aa19.83■□□□□ 0.76
VPS28-209ENST00000528142 SYNPOQ8N3V7 929 aa19.83■□□□□ 0.76
VPS28-209ENST00000528142 OR52E4Q8NGH9 312 aa19.83■□□□□ 0.76
VPS28-209ENST00000528142 EME1Q96AY2 570 aa19.83■□□□□ 0.76
VPS28-209ENST00000528142 TOE1Q96GM8 510 aaKnown RBP19.83■□□□□ 0.76
VPS28-209ENST00000528142 LMAN1LQ9HAT1 526 aa19.83■□□□□ 0.76
VPS28-209ENST00000528142 AHSPQ9NZD4 102 aa19.83■□□□□ 0.76
VPS28-209ENST00000528142 ZNF624Q9P2J8 865 aaPredicted RBP19.83■□□□□ 0.76
VPS28-209ENST00000528142 DUSP12Q9UNI6 340 aa19.83■□□□□ 0.76
VPS28-209ENST00000528142 CYP8B1Q9UNU6 501 aa19.83■□□□□ 0.76
VPS28-209ENST00000528142 LCMT2O60294 686 aaKnown RBP19.82■□□□□ 0.76
VPS28-209ENST00000528142 SCELO95171 688 aa19.82■□□□□ 0.76
VPS28-209ENST00000528142 C1QCP02747 245 aa19.82■□□□□ 0.76
VPS28-209ENST00000528142 FURINP09958 794 aa19.82■□□□□ 0.76
VPS28-209ENST00000528142 PEBP1P30086 187 aaKnown RBP19.82■□□□□ 0.76
VPS28-209ENST00000528142 GPR155Q7Z3F1 870 aa19.82■□□□□ 0.76
VPS28-209ENST00000528142 NRROSQ86YC3 692 aa19.82■□□□□ 0.76
VPS28-209ENST00000528142 VPS37AQ8NEZ2 397 aa19.82■□□□□ 0.76
VPS28-209ENST00000528142 FIG4Q92562 907 aa19.82■□□□□ 0.76
VPS28-209ENST00000528142 FAM120BQ96EK7 910 aaKnown RBP19.82■□□□□ 0.76
VPS28-209ENST00000528142 F2RL3Q96RI0 385 aa19.82■□□□□ 0.76
VPS28-209ENST00000528142 SORBS1Q9BX66 1292 aaKnown RBP19.82■□□□□ 0.76
VPS28-209ENST00000528142 BHLHE41Q9C0J9 482 aaPredicted RBP19.82■□□□□ 0.76
VPS28-209ENST00000528142 COQ10BQ9H8M1 238 aa19.82■□□□□ 0.76
VPS28-209ENST00000528142 TRNAU1APQ9NX07 287 aaKnown RBP19.82■□□□□ 0.76
VPS28-209ENST00000528142 WSB2Q9NYS7 404 aaPredicted RBP19.82■□□□□ 0.76
VPS28-209ENST00000528142 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.82■□□□□ 0.76
VPS28-209ENST00000528142 GMEB1Q9Y692 573 aa19.82■□□□□ 0.76
VPS28-209ENST00000528142 CLIC1O00299 241 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 RNASET2O00584 256 aaKnown RBP19.81■□□□□ 0.76
VPS28-209ENST00000528142 GSTA4O15217 222 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 OR1F1O43749 312 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 KDM1AO60341 852 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 RASGRP1O95267 797 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 CPSF4O95639 269 aaKnown RBP19.81■□□□□ 0.76
VPS28-209ENST00000528142 ZCCHC18P0CG32 403 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 ENGP17813 658 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 GPX2P18283 190 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 FASP25445 335 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 NDUFS1P28331 727 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 ACTR1BP42025 376 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 TAS2R50P59544 299 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 ACTR1AP61163 376 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 ABATP80404 500 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 MC1RQ01726 317 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 FZD5Q13467 585 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 GAS6Q14393 721 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 TCEA2Q15560 299 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 PUS10Q3MIT2 529 aaKnown RBP19.81■□□□□ 0.76
VPS28-209ENST00000528142 ZNF621Q6ZSS3 439 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 R3HCC1LQ7Z5L2 792 aaKnown RBP19.81■□□□□ 0.76
VPS28-209ENST00000528142 ADHFE1Q8IWW8 467 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 OR13H1Q8NG92 308 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 REXO5Q96IC2 774 aaKnown RBP19.81■□□□□ 0.76
VPS28-209ENST00000528142 SLC6A20Q9NP91 592 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 SPHK1Q9NYA1 384 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 SH3BP4Q9P0V3 963 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 CA14Q9ULX7 337 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 CXCR6O00574 342 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 GMNNO75496 209 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 EFNA1P20827 205 aaPredicted RBP19.81■□□□□ 0.76
VPS28-209ENST00000528142 BSGP35613 385 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 RPL3P39023 403 aaKnown RBP19.81■□□□□ 0.76
VPS28-209ENST00000528142 RABIFP47224 123 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 GTF2A1P52655 376 aaPredicted RBP19.81■□□□□ 0.76
VPS28-209ENST00000528142 PRKCQQ04759 706 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 C2orf80Q0P641 193 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 LRRC74AQ0VAA2 488 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 SLC30A9Q6PML9 568 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 IKBIPQ70UQ0 350 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 SERPINA11Q86U17 422 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 FAM20CQ8IXL6 584 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 SLC22A18ASQ8N1D0 253 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 OR2L3Q8NG85 312 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 SNX19Q92543 992 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 MTERF3Q96E29 417 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 CENPKQ9BS16 269 aa19.81■□□□□ 0.76
VPS28-209ENST00000528142 MRPS30Q9NP92 439 aaKnown RBP19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms