RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 TCF12Q99081 682 aa11.52□□□□□ -0.57
SRPRA-202ENST00000527817 MACROD1Q9BQ69 325 aa11.52□□□□□ -0.57
SRPRA-202ENST00000527817 POLDIP3Q9BY77 421 aaKnown RBP11.52□□□□□ -0.57
SRPRA-202ENST00000527817 FAM129AQ9BZQ8 928 aa11.52□□□□□ -0.57
SRPRA-202ENST00000527817 LIME1Q9H400 295 aa11.52□□□□□ -0.57
SRPRA-202ENST00000527817 TREX1Q9NSU2 369 aa11.52□□□□□ -0.57
SRPRA-202ENST00000527817 GALPQ9UBC7 116 aa11.52□□□□□ -0.57
SRPRA-202ENST00000527817 SLC22A7Q9Y694 548 aa11.52□□□□□ -0.57
SRPRA-202ENST00000527817 NSD1Q96L73 2696 aaPredicted RBP11.52□□□□□ -0.57
SRPRA-202ENST00000527817 FAM237BA0A1B0GVD1 139 aa11.51□□□□□ -0.57
SRPRA-202ENST00000527817 FEZF1A0PJY2 475 aa11.51□□□□□ -0.57
SRPRA-202ENST00000527817 FCHO1O14526 889 aa11.51□□□□□ -0.57
SRPRA-202ENST00000527817 PROM1O43490 865 aa11.51□□□□□ -0.57
SRPRA-202ENST00000527817 CDC40O60508 579 aaKnown RBP eCLIP11.51□□□□□ -0.57
SRPRA-202ENST00000527817 NIPSNAP2O75323 286 aa11.51□□□□□ -0.57
SRPRA-202ENST00000527817 RDH16O75452 317 aa11.51□□□□□ -0.57
SRPRA-202ENST00000527817 STATHP02808 62 aa11.51□□□□□ -0.57
SRPRA-202ENST00000527817 ESR1P03372 595 aa11.51□□□□□ -0.57
SRPRA-202ENST00000527817 PTMAP06454 111 aaKnown RBP11.51□□□□□ -0.57
SRPRA-202ENST00000527817 CHRM3P20309 590 aa11.51□□□□□ -0.57
SRPRA-202ENST00000527817 DNASE1P24855 282 aa11.51□□□□□ -0.57
SRPRA-202ENST00000527817 DLX5P56178 289 aa11.51□□□□□ -0.57
SRPRA-202ENST00000527817 ADAM8P78325 824 aa11.51□□□□□ -0.57
SRPRA-202ENST00000527817 TBX2Q13207 712 aaPredicted RBP11.51□□□□□ -0.57
SRPRA-202ENST00000527817 SPA17Q15506 151 aa11.51□□□□□ -0.57
SRPRA-202ENST00000527817 GXYLT1Q4G148 440 aa11.51□□□□□ -0.57
SRPRA-202ENST00000527817 ACSBG2Q5FVE4 666 aa11.51□□□□□ -0.57
SRPRA-202ENST00000527817 MEI1Q5TIA1 1274 aa11.51□□□□□ -0.57
SRPRA-202ENST00000527817 PAOXQ6QHF9 649 aa11.51□□□□□ -0.57
SRPRA-202ENST00000527817 BIVMQ86UB2 503 aa11.51□□□□□ -0.57
SRPRA-202ENST00000527817 CCDC170Q8IYT3 715 aa11.51□□□□□ -0.57
SRPRA-202ENST00000527817 RPRMLQ8N4K4 120 aa11.51□□□□□ -0.57
SRPRA-202ENST00000527817 KCT2Q8NC54 265 aa11.51□□□□□ -0.57
SRPRA-202ENST00000527817 OR52N2Q8NGI0 321 aa11.51□□□□□ -0.57
SRPRA-202ENST00000527817 LPGAT1Q92604 370 aa11.51□□□□□ -0.57
SRPRA-202ENST00000527817 TSLPQ969D9 159 aa11.51□□□□□ -0.57
SRPRA-202ENST00000527817 PEX11GQ96HA9 241 aa11.51□□□□□ -0.57
SRPRA-202ENST00000527817 TSR3Q9UJK0 312 aaKnown RBP11.51□□□□□ -0.57
SRPRA-202ENST00000527817 NAALAD2Q9Y3Q0 740 aa11.51□□□□□ -0.57
SRPRA-202ENST00000527817 L3MBTL1Q9Y468 752 aa11.51□□□□□ -0.57
SRPRA-202ENST00000527817 E7EVH7 732 aa11.5□□□□□ -0.57
SRPRA-202ENST00000527817 GFYI3L273 518 aa11.5□□□□□ -0.57
SRPRA-202ENST00000527817 PFDN6O15212 129 aa11.5□□□□□ -0.57
SRPRA-202ENST00000527817 PDE9AO76083 593 aa11.5□□□□□ -0.57
SRPRA-202ENST00000527817 FHP07954 510 aa11.5□□□□□ -0.57
SRPRA-202ENST00000527817 RFC3P40938 356 aa11.5□□□□□ -0.57
SRPRA-202ENST00000527817 SKIV2L2P42285 1042 aaKnown RBP11.5□□□□□ -0.57
SRPRA-202ENST00000527817 ZFP36L2P47974 494 aaKnown RBP11.5□□□□□ -0.57
SRPRA-202ENST00000527817 LTBQ06643 244 aa11.5□□□□□ -0.57
SRPRA-202ENST00000527817 KCNJ11Q14654 390 aa11.5□□□□□ -0.57
SRPRA-202ENST00000527817 RPS6KA1Q15418 735 aa11.5□□□□□ -0.57
SRPRA-202ENST00000527817 THEMIS2Q5TEJ8 643 aa11.5□□□□□ -0.57
SRPRA-202ENST00000527817 MRNIPQ6NTE8 343 aa11.5□□□□□ -0.57
SRPRA-202ENST00000527817 ARSKQ6UWY0 536 aa11.5□□□□□ -0.57
SRPRA-202ENST00000527817 KIAA0408Q6ZU52 694 aa11.5□□□□□ -0.57
SRPRA-202ENST00000527817 CAMKMTQ7Z624 323 aa11.5□□□□□ -0.57
SRPRA-202ENST00000527817 SLC26A11Q86WA9 606 aa11.5□□□□□ -0.57
SRPRA-202ENST00000527817 REXO1L1PQ8IX06 675 aa11.5□□□□□ -0.57
SRPRA-202ENST00000527817 NFAM1Q8NET5 270 aaPredicted RBP11.5□□□□□ -0.57
SRPRA-202ENST00000527817 SLC13A3Q8WWT9 602 aa11.5□□□□□ -0.57
SRPRA-202ENST00000527817 ASB11Q8WXH4 323 aa11.5□□□□□ -0.57
SRPRA-202ENST00000527817 TBC1D20Q96BZ9 403 aa11.5□□□□□ -0.57
SRPRA-202ENST00000527817 MBD6Q96DN6 1003 aa11.5□□□□□ -0.57
SRPRA-202ENST00000527817 CCDC138Q96M89 665 aa11.5□□□□□ -0.57
SRPRA-202ENST00000527817 DEFB126Q9BYW3 111 aa11.5□□□□□ -0.57
SRPRA-202ENST00000527817 SLC6A16Q9GZN6 736 aa11.5□□□□□ -0.57
SRPRA-202ENST00000527817 RASSF1Q9NS23 344 aa11.5□□□□□ -0.57
SRPRA-202ENST00000527817 ABCF3Q9NUQ8 709 aa11.5□□□□□ -0.57
SRPRA-202ENST00000527817 KLHL42Q9P2K6 505 aa11.5□□□□□ -0.57
SRPRA-202ENST00000527817 DUSP10Q9Y6W6 482 aa11.5□□□□□ -0.57
SRPRA-202ENST00000527817 MPDZO75970 2070 aa11.49□□□□□ -0.57
SRPRA-202ENST00000527817 BTNL10A8MVZ5 291 aa11.49□□□□□ -0.57
SRPRA-202ENST00000527817 ZBTB14O43829 449 aa11.49□□□□□ -0.57
SRPRA-202ENST00000527817 LCMT2O60294 686 aaKnown RBP11.49□□□□□ -0.57
SRPRA-202ENST00000527817 CDC123O75794 336 aaPredicted RBP11.49□□□□□ -0.57
SRPRA-202ENST00000527817 ARNTP27540 789 aa11.49□□□□□ -0.57
SRPRA-202ENST00000527817 NMBRP28336 390 aa11.49□□□□□ -0.57
SRPRA-202ENST00000527817 NPY2RP49146 381 aa11.49□□□□□ -0.57
SRPRA-202ENST00000527817 NAP1L1P55209 391 aaKnown RBP11.49□□□□□ -0.57
SRPRA-202ENST00000527817 HERC3Q15034 1050 aa11.49□□□□□ -0.57
SRPRA-202ENST00000527817 OASLQ15646 514 aaKnown RBP11.49□□□□□ -0.57
SRPRA-202ENST00000527817 TYSND1Q2T9J0 566 aa11.49□□□□□ -0.57
SRPRA-202ENST00000527817 RNF187Q5TA31 235 aaPredicted RBP11.49□□□□□ -0.57
SRPRA-202ENST00000527817 CAPN13Q6MZZ7 669 aaPredicted RBP11.49□□□□□ -0.57
SRPRA-202ENST00000527817 CYHR1Q6ZMK1 362 aa11.49□□□□□ -0.57
SRPRA-202ENST00000527817 ASPGQ86U10 573 aa11.49□□□□□ -0.57
SRPRA-202ENST00000527817 AFAP1L2Q8N4X5 818 aa11.49□□□□□ -0.57
SRPRA-202ENST00000527817 UBL4BQ8N7F7 174 aa11.49□□□□□ -0.57
SRPRA-202ENST00000527817 LRRC57Q8N9N7 239 aa11.49□□□□□ -0.57
SRPRA-202ENST00000527817 OR5M3Q8NGP4 307 aa11.49□□□□□ -0.57
SRPRA-202ENST00000527817 OR10Q1Q8NGQ4 319 aa11.49□□□□□ -0.57
SRPRA-202ENST00000527817 FAM136AQ96C01 138 aa11.49□□□□□ -0.57
SRPRA-202ENST00000527817 PTCHD1Q96NR3 888 aa11.49□□□□□ -0.57
SRPRA-202ENST00000527817 TTYH2Q9BSA4 534 aa11.49□□□□□ -0.57
SRPRA-202ENST00000527817 IL22Q9GZX6 179 aa11.49□□□□□ -0.57
SRPRA-202ENST00000527817 PCBD2Q9H0N5 130 aa11.49□□□□□ -0.57
SRPRA-202ENST00000527817 DEFB127Q9H1M4 99 aa11.49□□□□□ -0.57
SRPRA-202ENST00000527817 RAB6BQ9NRW1 208 aa11.49□□□□□ -0.57
SRPRA-202ENST00000527817 DRG1Q9Y295 367 aaKnown RBP11.49□□□□□ -0.57
SRPRA-202ENST00000527817 CRYL1Q9Y2S2 319 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms