RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 BBS9Q3SYG4 887 aa21.09■□□□□ 0.97
TRAPPC4-208ENST00000527680 DUPD1Q68J44 220 aa21.09■□□□□ 0.97
TRAPPC4-208ENST00000527680 PAPD4Q6PIY7 484 aaKnown RBP21.09■□□□□ 0.97
TRAPPC4-208ENST00000527680 GPATCH11Q8N954 259 aa21.09■□□□□ 0.97
TRAPPC4-208ENST00000527680 PLPP5Q8NEB5 264 aa21.09■□□□□ 0.97
TRAPPC4-208ENST00000527680 KLHL1Q9NR64 748 aa21.09■□□□□ 0.97
TRAPPC4-208ENST00000527680 FAM227AF5H4B4 570 aa21.08■□□□□ 0.97
TRAPPC4-208ENST00000527680 DNALI1O14645 258 aaPredicted RBP21.08■□□□□ 0.97
TRAPPC4-208ENST00000527680 GUCA1CO95843 209 aa21.08■□□□□ 0.97
TRAPPC4-208ENST00000527680 OR4D2P58180 307 aa21.08■□□□□ 0.97
TRAPPC4-208ENST00000527680 SKP1P63208 163 aa21.08■□□□□ 0.97
TRAPPC4-208ENST00000527680 OC90Q02509 493 aaPredicted RBP21.08■□□□□ 0.97
TRAPPC4-208ENST00000527680 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.08■□□□□ 0.97
TRAPPC4-208ENST00000527680 HP1BP3Q5SSJ5 553 aaPredicted RBP21.08■□□□□ 0.97
TRAPPC4-208ENST00000527680 H3F3CQ6NXT2 135 aa21.08■□□□□ 0.97
TRAPPC4-208ENST00000527680 KIAA0408Q6ZU52 694 aa21.08■□□□□ 0.97
TRAPPC4-208ENST00000527680 TICAM1Q8IUC6 712 aa21.08■□□□□ 0.97
TRAPPC4-208ENST00000527680 CRLF3Q8IUI8 442 aa21.08■□□□□ 0.97
TRAPPC4-208ENST00000527680 SLC35F6Q8N357 371 aa21.08■□□□□ 0.97
TRAPPC4-208ENST00000527680 OR5T3Q8NGG3 340 aa21.08■□□□□ 0.97
TRAPPC4-208ENST00000527680 VWA7Q9Y334 891 aa21.08■□□□□ 0.97
TRAPPC4-208ENST00000527680 CD46P15529 392 aa21.07■□□□□ 0.96
TRAPPC4-208ENST00000527680 CD96P40200 585 aa21.07■□□□□ 0.96
TRAPPC4-208ENST00000527680 TAS2R50P59544 299 aa21.07■□□□□ 0.96
TRAPPC4-208ENST00000527680 TUBA3CQ13748 450 aa21.07■□□□□ 0.96
TRAPPC4-208ENST00000527680 CSHL1Q14406 222 aa21.07■□□□□ 0.96
TRAPPC4-208ENST00000527680 MSS51Q4VC12 460 aa21.07■□□□□ 0.96
TRAPPC4-208ENST00000527680 MTFR2Q6P444 385 aa21.07■□□□□ 0.96
TRAPPC4-208ENST00000527680 TUBA3EQ6PEY2 450 aa21.07■□□□□ 0.96
TRAPPC4-208ENST00000527680 MRGPRGQ86SM5 289 aa21.07■□□□□ 0.96
TRAPPC4-208ENST00000527680 CYP4X1Q8N118 509 aa21.07■□□□□ 0.96
TRAPPC4-208ENST00000527680 SLC5A8Q8N695 610 aa21.07■□□□□ 0.96
TRAPPC4-208ENST00000527680 ABHD11Q8NFV4 315 aa21.07■□□□□ 0.96
TRAPPC4-208ENST00000527680 ATL1Q8WXF7 558 aa21.07■□□□□ 0.96
TRAPPC4-208ENST00000527680 MOCOSQ96EN8 888 aa21.07■□□□□ 0.96
TRAPPC4-208ENST00000527680 CERS2Q96G23 380 aa21.07■□□□□ 0.96
TRAPPC4-208ENST00000527680 CFAP36Q96G28 342 aa21.07■□□□□ 0.96
TRAPPC4-208ENST00000527680 OR1F2PQ96R84 312 aa21.07■□□□□ 0.96
TRAPPC4-208ENST00000527680 DDX47Q9H0S4 455 aaKnown RBP21.07■□□□□ 0.96
TRAPPC4-208ENST00000527680 MMP25Q9NPA2 562 aa21.07■□□□□ 0.96
TRAPPC4-208ENST00000527680 TRBC2A0A5B9 178 aa21.06■□□□□ 0.96
TRAPPC4-208ENST00000527680 B4GALT2O60909 372 aa21.06■□□□□ 0.96
TRAPPC4-208ENST00000527680 MLYCDO95822 493 aa21.06■□□□□ 0.96
TRAPPC4-208ENST00000527680 ESRRAP11474 423 aaPredicted RBP21.06■□□□□ 0.96
TRAPPC4-208ENST00000527680 ALOX12P18054 663 aa21.06■□□□□ 0.96
TRAPPC4-208ENST00000527680 EEF1DP29692 281 aaKnown RBP21.06■□□□□ 0.96
TRAPPC4-208ENST00000527680 PGGT1BP53609 377 aa21.06■□□□□ 0.96
TRAPPC4-208ENST00000527680 AP1S2P56377 157 aa21.06■□□□□ 0.96
TRAPPC4-208ENST00000527680 OLR1P78380 273 aa21.06■□□□□ 0.96
TRAPPC4-208ENST00000527680 RHAGQ02094 409 aa21.06■□□□□ 0.96
TRAPPC4-208ENST00000527680 RGS1Q08116 209 aa21.06■□□□□ 0.96
TRAPPC4-208ENST00000527680 ART3Q13508 389 aa21.06■□□□□ 0.96
TRAPPC4-208ENST00000527680 PWP1Q13610 501 aa21.06■□□□□ 0.96
TRAPPC4-208ENST00000527680 OR1C1Q15619 314 aa21.06■□□□□ 0.96
TRAPPC4-208ENST00000527680 DEFB134Q4QY38 66 aa21.06■□□□□ 0.96
TRAPPC4-208ENST00000527680 CATSPEREQ5SY80 951 aa21.06■□□□□ 0.96
TRAPPC4-208ENST00000527680 TEDDM1Q5T9Z0 273 aa21.06■□□□□ 0.96
TRAPPC4-208ENST00000527680 HECTD2Q5U5R9 776 aa21.06■□□□□ 0.96
TRAPPC4-208ENST00000527680 SPINK14Q6IE38 97 aa21.06■□□□□ 0.96
TRAPPC4-208ENST00000527680 IGDCC3Q8IVU1 814 aa21.06■□□□□ 0.96
TRAPPC4-208ENST00000527680 ZNF740Q8NDX6 193 aa21.06■□□□□ 0.96
TRAPPC4-208ENST00000527680 OR4K1Q8NGD4 311 aa21.06■□□□□ 0.96
TRAPPC4-208ENST00000527680 OR56A3Q8NH54 315 aa21.06■□□□□ 0.96
TRAPPC4-208ENST00000527680 TSLPQ969D9 159 aa21.06■□□□□ 0.96
TRAPPC4-208ENST00000527680 TBC1D20Q96BZ9 403 aa21.06■□□□□ 0.96
TRAPPC4-208ENST00000527680 CCDC120Q96HB5 630 aa21.06■□□□□ 0.96
TRAPPC4-208ENST00000527680 SIGLEC12Q96PQ1 595 aa21.06■□□□□ 0.96
TRAPPC4-208ENST00000527680 SLC17A6Q9P2U8 582 aa21.06■□□□□ 0.96
TRAPPC4-208ENST00000527680 MAGEB17A8MXT2 336 aa21.05■□□□□ 0.96
TRAPPC4-208ENST00000527680 CHST10O43529 356 aa21.05■□□□□ 0.96
TRAPPC4-208ENST00000527680 FHP07954 510 aa21.05■□□□□ 0.96
TRAPPC4-208ENST00000527680 SAT1P21673 171 aa21.05■□□□□ 0.96
TRAPPC4-208ENST00000527680 JAK1P23458 1154 aa21.05■□□□□ 0.96
TRAPPC4-208ENST00000527680 TNFRSF8P28908 595 aa21.05■□□□□ 0.96
TRAPPC4-208ENST00000527680 CA7P43166 264 aa21.05■□□□□ 0.96
TRAPPC4-208ENST00000527680 ALDH6A1Q02252 535 aaKnown RBP21.05■□□□□ 0.96
TRAPPC4-208ENST00000527680 ZXDCQ2QGD7 858 aaPredicted RBP21.05■□□□□ 0.96
TRAPPC4-208ENST00000527680 NIPAL1Q6NVV3 410 aa21.05■□□□□ 0.96
TRAPPC4-208ENST00000527680 CNTN4Q8IWV2 1026 aa21.05■□□□□ 0.96
TRAPPC4-208ENST00000527680 PDIK1LQ8N165 341 aa21.05■□□□□ 0.96
TRAPPC4-208ENST00000527680 HORMAD2Q8N7B1 307 aa21.05■□□□□ 0.96
TRAPPC4-208ENST00000527680 ITLN2Q8WWU7 325 aaPredicted RBP21.05■□□□□ 0.96
TRAPPC4-208ENST00000527680 PTCHD1Q96NR3 888 aa21.05■□□□□ 0.96
TRAPPC4-208ENST00000527680 OR4K3Q96R72 315 aa21.05■□□□□ 0.96
TRAPPC4-208ENST00000527680 UNKQ9C0B0 810 aaKnown RBP21.05■□□□□ 0.96
TRAPPC4-208ENST00000527680 CDCP1Q9H5V8 836 aa21.05■□□□□ 0.96
TRAPPC4-208ENST00000527680 LANCL2Q9NS86 450 aa21.05■□□□□ 0.96
TRAPPC4-208ENST00000527680 DYRK1BQ9Y463 629 aa21.05■□□□□ 0.96
TRAPPC4-208ENST00000527680 PCDHGB6Q9Y5F9 930 aa21.05■□□□□ 0.96
TRAPPC4-208ENST00000527680 GABRR3A8MPY1 467 aa21.04■□□□□ 0.96
TRAPPC4-208ENST00000527680 NDC80O14777 642 aa21.04■□□□□ 0.96
TRAPPC4-208ENST00000527680 GALR3O60755 368 aaPredicted RBP21.04■□□□□ 0.96
TRAPPC4-208ENST00000527680 DNAJB6O75190 326 aa21.04■□□□□ 0.96
TRAPPC4-208ENST00000527680 WISP2O76076 250 aa21.04■□□□□ 0.96
TRAPPC4-208ENST00000527680 TSPAN12O95859 305 aa21.04■□□□□ 0.96
TRAPPC4-208ENST00000527680 B3GALT4O96024 378 aa21.04■□□□□ 0.96
TRAPPC4-208ENST00000527680 ZNF888P0CJ79 500 aaPredicted RBP21.04■□□□□ 0.96
TRAPPC4-208ENST00000527680 HNF4AP41235 474 aa21.04■□□□□ 0.96
TRAPPC4-208ENST00000527680 USP10Q14694 798 aaKnown RBP21.04■□□□□ 0.96
TRAPPC4-208ENST00000527680 FAM45BPQ6NSW5 357 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms