RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 CD300CQ08708 224 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 MAD2L1Q13257 205 aaPredicted RBP7.56□□□□□ -1.2
SPIDR-223ENST00000524033 MTA1Q13330 715 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 LAPTM5Q13571 262 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 RAPSNQ13702 412 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 GTF2H2Q13888 395 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 GBX1Q14549 363 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 HIST2H2ACQ16777 129 aaPredicted RBP7.56□□□□□ -1.2
SPIDR-223ENST00000524033 AP5B1Q2VPB7 878 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 GAB4Q2WGN9 574 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 C18orf21Q32NC0 220 aaPredicted RBP7.56□□□□□ -1.2
SPIDR-223ENST00000524033 INAVAQ3KP66 663 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 PLK5Q496M5 336 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 GTDC1Q4AE62 458 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 LDLRAP1Q5SW96 308 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 ZNF468Q5VIY5 522 aaPredicted RBP7.56□□□□□ -1.2
SPIDR-223ENST00000524033 GTF2H2CQ6P1K8 395 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 METTL2BQ6P1Q9 378 aaKnown RBP7.56□□□□□ -1.2
SPIDR-223ENST00000524033 TMEM53Q6P2H8 277 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 SPESP1Q6UW49 350 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 IL27RAQ6UWB1 636 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 SUSD1Q6UWL2 747 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 MSANTD1Q6ZTZ1 278 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 GLT6D1Q7Z4J2 308 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 ADAMTSL2Q86TH1 951 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 SLCO6A1Q86UG4 719 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 EID3Q8N140 333 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 ZNF513Q8N8E2 541 aaPredicted RBP7.56□□□□□ -1.2
SPIDR-223ENST00000524033 SCAIQ8N9R8 606 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 SETD9Q8NE22 299 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 TSTD1Q8NFU3 115 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 OR10A6Q8NH74 314 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 NDNFQ8TB73 568 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 NUDT8Q8WV74 236 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 EEF1AKMT1Q8WVE0 214 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 FIG4Q92562 907 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 USP7Q93009 1102 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 ESAMQ96AP7 390 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 CCDC74AQ96AQ1 378 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 EFHD2Q96C19 240 aaPredicted RBP7.56□□□□□ -1.2
SPIDR-223ENST00000524033 OTUB2Q96DC9 234 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 CCDC138Q96M89 665 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 ALOXE3Q9BYJ1 711 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 SLC29A3Q9BZD2 475 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 SLIRPQ9GZT3 109 aaKnown RBP7.56□□□□□ -1.2
SPIDR-223ENST00000524033 DUSP15Q9H1R2 295 aaPredicted RBP7.56□□□□□ -1.2
SPIDR-223ENST00000524033 ADNPQ9H2P0 1102 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 PIF1Q9H611 641 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 CCSER2Q9H7U1 834 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 KAT8Q9H7Z6 458 aaKnown RBP7.56□□□□□ -1.2
SPIDR-223ENST00000524033 SERHLQ9NQF3 203 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 C1orf109Q9NX04 203 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 ELOVL2Q9NXB9 296 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 CD274Q9NZQ7 290 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 TRPS1Q9UHF7 1281 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 INVSQ9Y283 1065 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 OARD1Q9Y530 152 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 PCDHB14Q9Y5E9 798 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 PCDHGA5Q9Y5G8 931 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 TNPO3Q9Y5L0 923 aaKnown RBP7.56□□□□□ -1.2
SPIDR-223ENST00000524033 NCOR2Q9Y618 2525 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 CACNA1IQ9P0X4 2223 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 ZZEF1O43149 2961 aa7.56□□□□□ -1.2
SPIDR-223ENST00000524033 KCNE1BA0A087WTH5 132 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 OR2A25A4D2G3 310 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 ANTXRLA6NF34 631 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 NCF1BA6NI72 391 aaPredicted RBP7.55□□□□□ -1.2
SPIDR-223ENST00000524033 METTL15A6NJ78 407 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 CLDN24A6NM45 220 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 NCF1CA8MVU1 366 aaPredicted RBP7.55□□□□□ -1.2
SPIDR-223ENST00000524033 GAPDHSO14556 408 aaPredicted RBP7.55□□□□□ -1.2
SPIDR-223ENST00000524033 INSIG1O15503 277 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 KDELR3O43731 214 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 HS6ST1O60243 411 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 OR1I1O60431 355 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 DPM1O60762 260 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 RECQL5O94762 991 aaPredicted RBP7.55□□□□□ -1.2
SPIDR-223ENST00000524033 EPN2O95208 641 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 ANGPTL1O95841 491 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 TBX18O95935 607 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 OTCP00480 354 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 ESR1P03372 595 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 APODP05090 189 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 IL6P05231 212 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 NCF1P14598 390 aaPredicted RBP7.55□□□□□ -1.2
SPIDR-223ENST00000524033 ACPPP15309 386 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 FUT4P22083 530 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 PRPH2P23942 346 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 AKT1P31749 480 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 MC4RP32245 332 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 UGT2B10P36537 528 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 ATP5C1P36542 298 aaKnown RBP7.55□□□□□ -1.2
SPIDR-223ENST00000524033 CASP2P42575 452 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 PTGER3P43115 390 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 RPL38P63173 70 aaKnown RBP7.55□□□□□ -1.2
SPIDR-223ENST00000524033 PHC1P78364 1004 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 MESP2Q0VG99 397 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 EFEMP1Q12805 493 aa7.55□□□□□ -1.2
SPIDR-223ENST00000524033 MAD2L1BPQ15013 274 aaPredicted RBP7.55□□□□□ -1.2
SPIDR-223ENST00000524033 ABRAXAS2Q15018 415 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 167.7 ms