RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 CYHR1Q6ZMK1 362 aa24.36■■□□□ 1.49
PVT1-219ENST00000523427 ZNF669Q96BR6 464 aaPredicted RBP24.36■■□□□ 1.49
PVT1-219ENST00000523427 ATG10Q9H0Y0 220 aa24.36■■□□□ 1.49
PVT1-219ENST00000523427 GUCA1BQ9UMX6 200 aa24.36■■□□□ 1.49
PVT1-219ENST00000523427 ZFHX3Q15911 3703 aa24.35■■□□□ 1.49
PVT1-219ENST00000523427 ITPR3Q14573 2671 aa24.35■■□□□ 1.49
PVT1-219ENST00000523427 E9PLN8 166 aa24.35■■□□□ 1.49
PVT1-219ENST00000523427 PTGER1P34995 402 aa24.35■■□□□ 1.49
PVT1-219ENST00000523427 SKIV2L2P42285 1042 aaKnown RBP24.35■■□□□ 1.49
PVT1-219ENST00000523427 OLR1P78380 273 aa24.35■■□□□ 1.49
PVT1-219ENST00000523427 DHX34Q14147 1143 aaKnown RBP24.35■■□□□ 1.49
PVT1-219ENST00000523427 ZNF549Q6P9A3 640 aa24.35■■□□□ 1.49
PVT1-219ENST00000523427 C4orf22Q6V702 233 aa24.35■■□□□ 1.49
PVT1-219ENST00000523427 MBOAT1Q6ZNC8 495 aa24.35■■□□□ 1.49
PVT1-219ENST00000523427 TMEM139Q8IV31 216 aa24.35■■□□□ 1.49
PVT1-219ENST00000523427 VKORC1Q9BQB6 163 aa24.35■■□□□ 1.49
PVT1-219ENST00000523427 INTS10Q9NVR2 710 aaKnown RBP24.35■■□□□ 1.49
PVT1-219ENST00000523427 COQ3Q9NZJ6 369 aa24.35■■□□□ 1.49
PVT1-219ENST00000523427 SAMD15Q9P1V8 674 aa24.35■■□□□ 1.49
PVT1-219ENST00000523427 MED16Q9Y2X0 877 aa24.35■■□□□ 1.49
PVT1-219ENST00000523427 ASB1Q9Y576 335 aa24.35■■□□□ 1.49
PVT1-219ENST00000523427 ADAM10O14672 748 aa24.34■■□□□ 1.49
PVT1-219ENST00000523427 B4GALT2O60909 372 aa24.34■■□□□ 1.49
PVT1-219ENST00000523427 DNAJB6O75190 326 aa24.34■■□□□ 1.49
PVT1-219ENST00000523427 SERPIND1P05546 499 aa24.34■■□□□ 1.49
PVT1-219ENST00000523427 HRH2P25021 359 aa24.34■■□□□ 1.49
PVT1-219ENST00000523427 TPP2P29144 1249 aaPredicted RBP24.34■■□□□ 1.49
PVT1-219ENST00000523427 RFC3P40938 356 aa24.34■■□□□ 1.49
PVT1-219ENST00000523427 RPS6KA1Q15418 735 aa24.34■■□□□ 1.49
PVT1-219ENST00000523427 CAPN13Q6MZZ7 669 aaPredicted RBP24.34■■□□□ 1.49
PVT1-219ENST00000523427 CEP128Q6ZU80 1094 aa24.34■■□□□ 1.49
PVT1-219ENST00000523427 FGD2Q7Z6J4 655 aa24.34■■□□□ 1.49
PVT1-219ENST00000523427 C17orf64Q86WR6 236 aa24.34■■□□□ 1.49
PVT1-219ENST00000523427 CHERPQ8IWX8 916 aaKnown RBP24.34■■□□□ 1.49
PVT1-219ENST00000523427 PLPP5Q8NEB5 264 aa24.34■■□□□ 1.49
PVT1-219ENST00000523427 TM4SF19Q96DZ7 209 aa24.34■■□□□ 1.49
PVT1-219ENST00000523427 THAP11Q96EK4 314 aa24.34■■□□□ 1.49
PVT1-219ENST00000523427 DMRTA2Q96SC8 542 aa24.34■■□□□ 1.49
PVT1-219ENST00000523427 ENKD1Q9H0I2 346 aa24.34■■□□□ 1.49
PVT1-219ENST00000523427 LANCL2Q9NS86 450 aa24.34■■□□□ 1.49
PVT1-219ENST00000523427 DHRS7Q9Y394 339 aa24.34■■□□□ 1.49
PVT1-219ENST00000523427 NF1P21359 2839 aa24.33■■□□□ 1.49
PVT1-219ENST00000523427 MAGEB17A8MXT2 336 aa24.33■■□□□ 1.49
PVT1-219ENST00000523427 B3GALT4O96024 378 aa24.33■■□□□ 1.49
PVT1-219ENST00000523427 TPOP07202 933 aa24.33■■□□□ 1.49
PVT1-219ENST00000523427 CDH1P12830 882 aa24.33■■□□□ 1.49
PVT1-219ENST00000523427 ENO3P13929 434 aaPredicted RBP24.33■■□□□ 1.49
PVT1-219ENST00000523427 TPSB2P20231 275 aa24.33■■□□□ 1.49
PVT1-219ENST00000523427 TPSAB1Q15661 275 aa24.33■■□□□ 1.49
PVT1-219ENST00000523427 RNF10Q8N5U6 811 aaKnown RBP24.33■■□□□ 1.49
PVT1-219ENST00000523427 PHF10Q8WUB8 498 aaKnown RBP24.33■■□□□ 1.49
PVT1-219ENST00000523427 SPG11Q96JI7 2443 aa24.32■■□□□ 1.48
PVT1-219ENST00000523427 NME2P1O60361 137 aa24.32■■□□□ 1.48
PVT1-219ENST00000523427 CDC40O60508 579 aaKnown RBP eCLIP24.32■■□□□ 1.48
PVT1-219ENST00000523427 SLC35G6P0C7Q6 338 aa24.32■■□□□ 1.48
PVT1-219ENST00000523427 NME2P22392 152 aa24.32■■□□□ 1.48
PVT1-219ENST00000523427 GRK3P35626 688 aa24.32■■□□□ 1.48
PVT1-219ENST00000523427 CYB561P49447 251 aa24.32■■□□□ 1.48
PVT1-219ENST00000523427 MEF2AQ02078 507 aaPredicted RBP24.32■■□□□ 1.48
PVT1-219ENST00000523427 NAE1Q13564 534 aa24.32■■□□□ 1.48
PVT1-219ENST00000523427 SPNS3Q6ZMD2 512 aa24.32■■□□□ 1.48
PVT1-219ENST00000523427 CD200R1Q8TD46 325 aa24.32■■□□□ 1.48
PVT1-219ENST00000523427 KCNJ9Q92806 393 aa24.32■■□□□ 1.48
PVT1-219ENST00000523427 TMEM125Q96AQ2 219 aa24.32■■□□□ 1.48
PVT1-219ENST00000523427 ADAMTS6Q9UKP5 1117 aa24.32■■□□□ 1.48
PVT1-219ENST00000523427 A0A1B0GTH9 108 aa24.31■■□□□ 1.48
PVT1-219ENST00000523427 A8MUA0 341 aa24.31■■□□□ 1.48
PVT1-219ENST00000523427 TFECO14948 347 aaPredicted RBP24.31■■□□□ 1.48
PVT1-219ENST00000523427 FANCGO15287 622 aa24.31■■□□□ 1.48
PVT1-219ENST00000523427 FHP07954 510 aa24.31■■□□□ 1.48
PVT1-219ENST00000523427 PTGS2P35354 604 aa24.31■■□□□ 1.48
PVT1-219ENST00000523427 ITGA8P53708 1063 aa24.31■■□□□ 1.48
PVT1-219ENST00000523427 SARNPP82979 210 aaKnown RBP24.31■■□□□ 1.48
PVT1-219ENST00000523427 CDK16Q00536 496 aa24.31■■□□□ 1.48
PVT1-219ENST00000523427 DEFB134Q4QY38 66 aa24.31■■□□□ 1.48
PVT1-219ENST00000523427 AGTRAPQ6RW13 159 aa24.31■■□□□ 1.48
PVT1-219ENST00000523427 PCGF5Q86SE9 256 aa24.31■■□□□ 1.48
PVT1-219ENST00000523427 CD163Q86VB7 1156 aa24.31■■□□□ 1.48
PVT1-219ENST00000523427 EID3Q8N140 333 aa24.31■■□□□ 1.48
PVT1-219ENST00000523427 ELP5Q8TE02 316 aa24.31■■□□□ 1.48
PVT1-219ENST00000523427 TBC1D20Q96BZ9 403 aa24.31■■□□□ 1.48
PVT1-219ENST00000523427 PTCHD1Q96NR3 888 aa24.31■■□□□ 1.48
PVT1-219ENST00000523427 PCBD2Q9H0N5 130 aa24.31■■□□□ 1.48
PVT1-219ENST00000523427 KLHL42Q9P2K6 505 aa24.31■■□□□ 1.48
PVT1-219ENST00000523427 SLC22A7Q9Y694 548 aa24.31■■□□□ 1.48
PVT1-219ENST00000523427 FAM90A27PA6NNH2 459 aa24.3■■□□□ 1.48
PVT1-219ENST00000523427 NDUFS4O43181 175 aa24.3■■□□□ 1.48
PVT1-219ENST00000523427 CHST10O43529 356 aa24.3■■□□□ 1.48
PVT1-219ENST00000523427 FGGP02679 453 aa24.3■■□□□ 1.48
PVT1-219ENST00000523427 SLC1A2P43004 574 aa24.3■■□□□ 1.48
PVT1-219ENST00000523427 MEOX1P50221 254 aa24.3■■□□□ 1.48
PVT1-219ENST00000523427 MPP1Q00013 466 aa24.3■■□□□ 1.48
PVT1-219ENST00000523427 ANKRD22Q5VYY1 191 aa24.3■■□□□ 1.48
PVT1-219ENST00000523427 DRICH1Q6PGQ1 229 aaPredicted RBP24.3■■□□□ 1.48
PVT1-219ENST00000523427 ZNF227Q86WZ6 799 aa24.3■■□□□ 1.48
PVT1-219ENST00000523427 LGI4Q8N135 537 aa24.3■■□□□ 1.48
PVT1-219ENST00000523427 MFSD9Q8NBP5 474 aa24.3■■□□□ 1.48
PVT1-219ENST00000523427 OR1F2PQ96R84 312 aa24.3■■□□□ 1.48
PVT1-219ENST00000523427 OLFM1Q99784 485 aa24.3■■□□□ 1.48
PVT1-219ENST00000523427 PDE10AQ9Y233 779 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms