RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 DCAF13Q9NV06 445 aaKnown RBP11.64□□□□□ -0.55
SPIDR-217ENST00000522117 PURGQ9UJV8 347 aaKnown RBP11.64□□□□□ -0.55
SPIDR-217ENST00000522117 CDH10Q9Y6N8 788 aa11.64□□□□□ -0.55
SPIDR-217ENST00000522117 COL4A5P29400 1685 aa11.64□□□□□ -0.55
SPIDR-217ENST00000522117 PRRT4C9JH25 899 aa11.64□□□□□ -0.55
SPIDR-217ENST00000522117 CXCR6O00574 342 aa11.64□□□□□ -0.55
SPIDR-217ENST00000522117 TMEM127O75204 238 aa11.64□□□□□ -0.55
SPIDR-217ENST00000522117 APOL3O95236 402 aa11.64□□□□□ -0.55
SPIDR-217ENST00000522117 RECKO95980 971 aa11.64□□□□□ -0.55
SPIDR-217ENST00000522117 FGF2P09038 288 aa11.64□□□□□ -0.55
SPIDR-217ENST00000522117 EPB42P16452 691 aa11.64□□□□□ -0.55
SPIDR-217ENST00000522117 PAMP19021 973 aa11.64□□□□□ -0.55
SPIDR-217ENST00000522117 TKTL1P51854 596 aa11.64□□□□□ -0.55
SPIDR-217ENST00000522117 NUDT6P53370 316 aa11.64□□□□□ -0.55
SPIDR-217ENST00000522117 ATXN1P54253 815 aaKnown RBP11.64□□□□□ -0.55
SPIDR-217ENST00000522117 AIF1P55008 147 aa11.64□□□□□ -0.55
SPIDR-217ENST00000522117 EIF3MQ7L2H7 374 aaKnown RBP11.64□□□□□ -0.55
SPIDR-217ENST00000522117 PID1Q7Z2X4 250 aa11.64□□□□□ -0.55
SPIDR-217ENST00000522117 PAQR7Q86WK9 346 aa11.64□□□□□ -0.55
SPIDR-217ENST00000522117 STX19Q8N4C7 294 aa11.64□□□□□ -0.55
SPIDR-217ENST00000522117 LRRC17Q8N6Y2 441 aa11.64□□□□□ -0.55
SPIDR-217ENST00000522117 PPHLN1Q8NEY8 458 aaKnown RBP11.64□□□□□ -0.55
SPIDR-217ENST00000522117 OR10Q1Q8NGQ4 319 aa11.64□□□□□ -0.55
SPIDR-217ENST00000522117 WDR36Q8NI36 951 aaKnown RBP11.64□□□□□ -0.55
SPIDR-217ENST00000522117 MRPL48Q96GC5 212 aaKnown RBP11.64□□□□□ -0.55
SPIDR-217ENST00000522117 CRELD1Q96HD1 420 aa11.64□□□□□ -0.55
SPIDR-217ENST00000522117 ZNF419Q96HQ0 510 aaPredicted RBP11.64□□□□□ -0.55
SPIDR-217ENST00000522117 OSGEPL1Q9H4B0 414 aa11.64□□□□□ -0.55
SPIDR-217ENST00000522117 ZNF768Q9H5H4 540 aaKnown RBP11.64□□□□□ -0.55
SPIDR-217ENST00000522117 ZMIZ1Q9ULJ6 1067 aa11.64□□□□□ -0.55
SPIDR-217ENST00000522117 TRBV23-1A0A0A0MS06 115 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 A0A1W2PQL4 384 aaPredicted RBP11.63□□□□□ -0.55
SPIDR-217ENST00000522117 M0QYV0 167 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 CACNB4O00305 520 aaPredicted RBP11.63□□□□□ -0.55
SPIDR-217ENST00000522117 SGCEO43556 437 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 PSIP1O75475 530 aaKnown RBP11.63□□□□□ -0.55
SPIDR-217ENST00000522117 ACAA1P09110 424 aaPredicted RBP11.63□□□□□ -0.55
SPIDR-217ENST00000522117 PRKAR1AP10644 381 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 PTPRAP18433 802 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 APEX1P27695 318 aaKnown RBP11.63□□□□□ -0.55
SPIDR-217ENST00000522117 NNMTP40261 264 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 GMPSP49915 693 aaPredicted RBP11.63□□□□□ -0.55
SPIDR-217ENST00000522117 TCP10Q12799 353 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 TSC22D1Q15714 1073 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 SPDYE7PQ495Y7 208 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 CDKL4Q5MAI5 379 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 ZNF648Q5T619 568 aaPredicted RBP11.63□□□□□ -0.55
SPIDR-217ENST00000522117 SYPL2Q5VXT5 272 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 ARHGAP17Q68EM7 881 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 Q6ZPB1 254 aaPredicted RBP11.63□□□□□ -0.55
SPIDR-217ENST00000522117 ZFAND4Q86XD8 727 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 SLC34A3Q8N130 599 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 OR6S1Q8NH40 331 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 UBA3Q8TBC4 463 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 NUDT8Q8WV74 236 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 TMEM68Q96MH6 324 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 MGLLQ99685 303 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 MED28Q9H204 178 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 SLC28A3Q9HAS3 691 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 FOLH1BQ9HBA9 442 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 PRMT7Q9NVM4 692 aaPredicted RBP11.63□□□□□ -0.55
SPIDR-217ENST00000522117 ERAP1Q9NZ08 941 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 AFF4Q9UHB7 1163 aaKnown RBP11.63□□□□□ -0.55
SPIDR-217ENST00000522117 LRFN2Q9ULH4 789 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 DERAQ9Y315 318 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 RNF215Q9Y6U7 377 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 LRRC14BA6NHZ5 514 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 ACKR2O00590 384 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 RAD17O75943 681 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 HBQ1P09105 142 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 GOT1P17174 413 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 KCNJ5P48544 419 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 YWHAHQ04917 246 aaPredicted RBP11.63□□□□□ -0.55
SPIDR-217ENST00000522117 CRYZQ08257 329 aaKnown RBP11.63□□□□□ -0.55
SPIDR-217ENST00000522117 NPRL3Q12980 569 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 MPEG1Q2M385 716 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 DDX53Q86TM3 631 aaKnown RBP11.63□□□□□ -0.55
SPIDR-217ENST00000522117 FAM217AQ8IXS0 508 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 ATP6V1C2Q8NEY4 427 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 CREB3L4Q8TEY5 395 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 KHSRPQ92945 711 aaKnown RBP eCLIP11.63□□□□□ -0.557e-14■■■■□ 21.1
SPIDR-217ENST00000522117 MSTO1Q9BUK6 570 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 ZDHHC4Q9NPG8 344 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 B3GAT2Q9NPZ5 323 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 NYAP2Q9P242 653 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 ZNF222Q9UK12 451 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 NCKAP1Q9Y2A7 1128 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 PADI2Q9Y2J8 665 aa11.63□□□□□ -0.55
SPIDR-217ENST00000522117 A0A1B0GTL3 188 aa11.62□□□□□ -0.55
SPIDR-217ENST00000522117 G3V3G9 751 aa11.62□□□□□ -0.55
SPIDR-217ENST00000522117 SCELO95171 688 aa11.62□□□□□ -0.55
SPIDR-217ENST00000522117 MLYCDO95822 493 aa11.62□□□□□ -0.55
SPIDR-217ENST00000522117 LPLP06858 475 aa11.62□□□□□ -0.55
SPIDR-217ENST00000522117 CHRM5P08912 532 aaPredicted RBP11.62□□□□□ -0.55
SPIDR-217ENST00000522117 FOXK1P85037 733 aa11.62□□□□□ -0.55
SPIDR-217ENST00000522117 RIPPLY1Q0D2K3 151 aa11.62□□□□□ -0.55
SPIDR-217ENST00000522117 DUSP4Q13115 394 aa11.62□□□□□ -0.55
SPIDR-217ENST00000522117 DCAF8Q5TAQ9 597 aa11.62□□□□□ -0.55
SPIDR-217ENST00000522117 PGBD3Q8N328 593 aa11.62□□□□□ -0.55
SPIDR-217ENST00000522117 TMEM145Q8NBT3 493 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms