RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 TRIM54Q9BYV2 358 aa14.29□□□□□ -0.12
CSMD1-207ENST00000520451 PPANQ9NQ55 473 aaKnown RBP14.29□□□□□ -0.12
CSMD1-207ENST00000520451 ANKRD10Q9NXR5 420 aa14.29□□□□□ -0.12
CSMD1-207ENST00000520451 SH3BGRL2Q9UJC5 107 aa14.29□□□□□ -0.12
CSMD1-207ENST00000520451 CCL21O00585 134 aa14.28□□□□□ -0.12
CSMD1-207ENST00000520451 IL10P22301 178 aa14.28□□□□□ -0.12
CSMD1-207ENST00000520451 ST13P50502 369 aaKnown RBP14.28□□□□□ -0.12
CSMD1-207ENST00000520451 PGGT1BP53609 377 aa14.28□□□□□ -0.12
CSMD1-207ENST00000520451 AP1S2P56377 157 aa14.28□□□□□ -0.12
CSMD1-207ENST00000520451 RBPJQ06330 500 aa14.28□□□□□ -0.12
CSMD1-207ENST00000520451 TUBA3CQ13748 450 aa14.28□□□□□ -0.12
CSMD1-207ENST00000520451 MEP1AQ16819 746 aa14.28□□□□□ -0.12
CSMD1-207ENST00000520451 ZXDCQ2QGD7 858 aaPredicted RBP14.28□□□□□ -0.12
CSMD1-207ENST00000520451 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.28□□□□□ -0.12
CSMD1-207ENST00000520451 HECTD2Q5U5R9 776 aa14.28□□□□□ -0.12
CSMD1-207ENST00000520451 SP5Q6BEB4 398 aaPredicted RBP14.28□□□□□ -0.12
CSMD1-207ENST00000520451 TUBA3EQ6PEY2 450 aa14.28□□□□□ -0.12
CSMD1-207ENST00000520451 IGDCC3Q8IVU1 814 aa14.28□□□□□ -0.12
CSMD1-207ENST00000520451 SRRM1Q8IYB3 904 aaKnown RBP14.28□□□□□ -0.12
CSMD1-207ENST00000520451 AFAP1L2Q8N4X5 818 aa14.28□□□□□ -0.12
CSMD1-207ENST00000520451 TBC1D19Q8N5T2 526 aa14.28□□□□□ -0.12
CSMD1-207ENST00000520451 ZNF740Q8NDX6 193 aa14.28□□□□□ -0.12
CSMD1-207ENST00000520451 PLPP5Q8NEB5 264 aa14.28□□□□□ -0.12
CSMD1-207ENST00000520451 OR4K1Q8NGD4 311 aa14.28□□□□□ -0.12
CSMD1-207ENST00000520451 OR56A3Q8NH54 315 aa14.28□□□□□ -0.12
CSMD1-207ENST00000520451 ITLN2Q8WWU7 325 aaPredicted RBP14.28□□□□□ -0.12
CSMD1-207ENST00000520451 MOCOSQ96EN8 888 aa14.28□□□□□ -0.12
CSMD1-207ENST00000520451 CFAP36Q96G28 342 aa14.28□□□□□ -0.12
CSMD1-207ENST00000520451 SNF8Q96H20 258 aa14.28□□□□□ -0.12
CSMD1-207ENST00000520451 CCDC120Q96HB5 630 aa14.28□□□□□ -0.12
CSMD1-207ENST00000520451 SIGLEC12Q96PQ1 595 aa14.28□□□□□ -0.12
CSMD1-207ENST00000520451 OR4K3Q96R72 315 aa14.28□□□□□ -0.12
CSMD1-207ENST00000520451 LPAR4Q99677 370 aa14.28□□□□□ -0.12
CSMD1-207ENST00000520451 UTP23Q9BRU9 249 aaKnown RBP14.28□□□□□ -0.12
CSMD1-207ENST00000520451 DDX47Q9H0S4 455 aaKnown RBP14.28□□□□□ -0.12
CSMD1-207ENST00000520451 MMP25Q9NPA2 562 aa14.28□□□□□ -0.12
CSMD1-207ENST00000520451 LANCL2Q9NS86 450 aa14.28□□□□□ -0.12
CSMD1-207ENST00000520451 SCN3AQ9NY46 2000 aa14.28□□□□□ -0.12
CSMD1-207ENST00000520451 SNX12Q9UMY4 172 aa14.28□□□□□ -0.12
CSMD1-207ENST00000520451 CSMD1Q96PZ7 3565 aa14.28□□□□□ -0.12
CSMD1-207ENST00000520451 SCN2AQ99250 2005 aa14.27□□□□□ -0.12
CSMD1-207ENST00000520451 TRBC2A0A5B9 178 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 MAGEB17A8MXT2 336 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 FAM227AF5H4B4 570 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 TTI1O43156 1089 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 MAN1A2O60476 641 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 GALR3O60755 368 aaPredicted RBP14.27□□□□□ -0.13
CSMD1-207ENST00000520451 GUCA1CO95843 209 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 FHP07954 510 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 PRF1P14222 555 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 ALOX12P18054 663 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 TNFRSF8P28908 595 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 CD96P40200 585 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 CA7P43166 264 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 OR4D2P58180 307 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 TAS2R50P59544 299 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 SKP1P63208 163 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 OLR1P78380 273 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 RGS1Q08116 209 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 ART3Q13508 389 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 PWP1Q13610 501 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 USP10Q14694 798 aaKnown RBP14.27□□□□□ -0.13
CSMD1-207ENST00000520451 OR1C1Q15619 314 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 DEFB134Q4QY38 66 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 HP1BP3Q5SSJ5 553 aaPredicted RBP14.27□□□□□ -0.13
CSMD1-207ENST00000520451 TEDDM1Q5T9Z0 273 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 GALNT7Q86SF2 657 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 SLC5A8Q8N695 610 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 MDS2Q8NDY4 140 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 ATL1Q8WXF7 558 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 TBC1D20Q96BZ9 403 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 FBXL8Q96CD0 374 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 TSNARE1Q96NA8 513 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 NPAS2Q99743 824 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 SARGQ9BW04 601 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 HES7Q9BYE0 225 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 UNKQ9C0B0 810 aaKnown RBP14.27□□□□□ -0.13
CSMD1-207ENST00000520451 PLAC1Q9HBJ0 212 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 KLHL1Q9NR64 748 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 CORO1CQ9ULV4 474 aaPredicted RBP14.27□□□□□ -0.13
CSMD1-207ENST00000520451 VWA7Q9Y334 891 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 PCDHGB6Q9Y5F9 930 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 MYO7BQ6PIF6 2116 aa14.27□□□□□ -0.13
CSMD1-207ENST00000520451 GABRR3A8MPY1 467 aa14.26□□□□□ -0.13
CSMD1-207ENST00000520451 CES2O00748 559 aa14.26□□□□□ -0.13
CSMD1-207ENST00000520451 CHST10O43529 356 aa14.26□□□□□ -0.13
CSMD1-207ENST00000520451 DNAJB6O75190 326 aa14.26□□□□□ -0.13
CSMD1-207ENST00000520451 WISP2O76076 250 aa14.26□□□□□ -0.13
CSMD1-207ENST00000520451 B3GALT4O96024 378 aa14.26□□□□□ -0.13
CSMD1-207ENST00000520451 ENO2P09104 434 aaPredicted RBP14.26□□□□□ -0.13
CSMD1-207ENST00000520451 ZNF888P0CJ79 500 aaPredicted RBP14.26□□□□□ -0.13
CSMD1-207ENST00000520451 JAK1P23458 1154 aa14.26□□□□□ -0.13
CSMD1-207ENST00000520451 ELK3P41970 407 aa14.26□□□□□ -0.13
CSMD1-207ENST00000520451 CASP6P55212 293 aa14.26□□□□□ -0.13
CSMD1-207ENST00000520451 SLC26A5P58743 744 aa14.26□□□□□ -0.13
CSMD1-207ENST00000520451 OC90Q02509 493 aaPredicted RBP14.26□□□□□ -0.13
CSMD1-207ENST00000520451 CSHL1Q14406 222 aa14.26□□□□□ -0.13
CSMD1-207ENST00000520451 NAA30Q147X3 362 aaPredicted RBP14.26□□□□□ -0.13
CSMD1-207ENST00000520451 CATSPEREQ5SY80 951 aa14.26□□□□□ -0.13
CSMD1-207ENST00000520451 FAM45BPQ6NSW5 357 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms