RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 TMEM35AQ53FP2 167 aa13.5□□□□□ -0.25
SDC2-203ENST00000519587 YOD1Q5VVQ6 348 aaPredicted RBP13.5□□□□□ -0.25
SDC2-203ENST00000519587 FRMPD2BQ6IN97 320 aa13.5□□□□□ -0.25
SDC2-203ENST00000519587 FBXO42Q6P3S6 717 aa13.5□□□□□ -0.25
SDC2-203ENST00000519587 TLDC1Q6P9B6 456 aa13.5□□□□□ -0.25
SDC2-203ENST00000519587 CHSY3Q70JA7 882 aa13.5□□□□□ -0.25
SDC2-203ENST00000519587 VN1R4Q7Z5H5 301 aa13.5□□□□□ -0.25
SDC2-203ENST00000519587 ANKRD53Q8N9V6 530 aa13.5□□□□□ -0.25
SDC2-203ENST00000519587 WDR20Q8TBZ3 569 aa13.5□□□□□ -0.25
SDC2-203ENST00000519587 NT5CQ8TCD5 201 aa13.5□□□□□ -0.25
SDC2-203ENST00000519587 ZNF473Q8WTR7 871 aaKnown RBP13.5□□□□□ -0.25
SDC2-203ENST00000519587 OR6C1Q96RD1 312 aa13.5□□□□□ -0.25
SDC2-203ENST00000519587 MTERF1Q99551 399 aaKnown RBP13.5□□□□□ -0.25
SDC2-203ENST00000519587 SERPINI1Q99574 410 aa13.5□□□□□ -0.25
SDC2-203ENST00000519587 C20orf27Q9GZN8 174 aa13.5□□□□□ -0.25
SDC2-203ENST00000519587 ZNF395Q9H8N7 513 aaPredicted RBP13.5□□□□□ -0.25
SDC2-203ENST00000519587 SLCO1B3Q9NPD5 702 aa13.5□□□□□ -0.25
SDC2-203ENST00000519587 RIC8BQ9NVN3 520 aa13.5□□□□□ -0.25
SDC2-203ENST00000519587 ZDHHC2Q9UIJ5 367 aa13.5□□□□□ -0.25
SDC2-203ENST00000519587 ZMIZ1Q9ULJ6 1067 aa13.5□□□□□ -0.25
SDC2-203ENST00000519587 SRPK3Q9UPE1 567 aa13.5□□□□□ -0.25
SDC2-203ENST00000519587 KIF26BQ2KJY2 2108 aa13.49□□□□□ -0.25
SDC2-203ENST00000519587 SETXQ7Z333 2677 aaKnown RBP13.49□□□□□ -0.25
SDC2-203ENST00000519587 ASPMQ8IZT6 3477 aa13.49□□□□□ -0.25
SDC2-203ENST00000519587 A0A088AWK7 358 aa13.49□□□□□ -0.25
SDC2-203ENST00000519587 SLC28A1O00337 649 aa13.49□□□□□ -0.25
SDC2-203ENST00000519587 POLR1CO15160 346 aaPredicted RBP13.49□□□□□ -0.25
SDC2-203ENST00000519587 HDAC3O15379 428 aa13.49□□□□□ -0.25
SDC2-203ENST00000519587 LCMT2O60294 686 aaKnown RBP13.49□□□□□ -0.25
SDC2-203ENST00000519587 EDF1O60869 148 aaKnown RBP13.49□□□□□ -0.25
SDC2-203ENST00000519587 SKAP2O75563 359 aaPredicted RBP13.49□□□□□ -0.25
SDC2-203ENST00000519587 SEMA3DO95025 777 aa13.49□□□□□ -0.25
SDC2-203ENST00000519587 PDYNP01213 254 aa13.49□□□□□ -0.25
SDC2-203ENST00000519587 ZNF10P21506 573 aaPredicted RBP13.49□□□□□ -0.25
SDC2-203ENST00000519587 PTX3P26022 381 aaPredicted RBP13.49□□□□□ -0.25
SDC2-203ENST00000519587 LSP1P33241 339 aa13.49□□□□□ -0.25
SDC2-203ENST00000519587 RAP1GDS1P52306 607 aa13.49□□□□□ -0.25
SDC2-203ENST00000519587 GYS2P54840 703 aa13.49□□□□□ -0.25
SDC2-203ENST00000519587 EMP3P54852 163 aa13.49□□□□□ -0.25
SDC2-203ENST00000519587 GNGT1P63211 74 aa13.49□□□□□ -0.25
SDC2-203ENST00000519587 MC2RQ01718 297 aa13.49□□□□□ -0.25
SDC2-203ENST00000519587 PDCD2Q16342 344 aaPredicted RBP13.49□□□□□ -0.25
SDC2-203ENST00000519587 WASHC2DQ5SRD0 308 aa13.49□□□□□ -0.25
SDC2-203ENST00000519587 GARNL3Q5VVW2 1013 aa13.49□□□□□ -0.25
SDC2-203ENST00000519587 NIPAL1Q6NVV3 410 aa13.49□□□□□ -0.25
SDC2-203ENST00000519587 CEACAM20Q6UY09 585 aa13.49□□□□□ -0.25
SDC2-203ENST00000519587 ABHD13Q7L211 337 aa13.49□□□□□ -0.25
SDC2-203ENST00000519587 PPP1R3BQ86XI6 285 aa13.49□□□□□ -0.25
SDC2-203ENST00000519587 SRFBP1Q8NEF9 429 aaKnown RBP13.49□□□□□ -0.25
SDC2-203ENST00000519587 USP7Q93009 1102 aa13.49□□□□□ -0.25
SDC2-203ENST00000519587 ZNF501Q96CX3 271 aaPredicted RBP13.49□□□□□ -0.25
SDC2-203ENST00000519587 C19orf60Q96EN9 201 aa13.49□□□□□ -0.25
SDC2-203ENST00000519587 CHMP6Q96FZ7 201 aa13.49□□□□□ -0.25
SDC2-203ENST00000519587 ZNF285Q96NJ3 590 aa13.49□□□□□ -0.25
SDC2-203ENST00000519587 FCRL4Q96PJ5 515 aa13.49□□□□□ -0.25
SDC2-203ENST00000519587 TEFMQ96QE5 360 aaKnown RBP13.49□□□□□ -0.25
SDC2-203ENST00000519587 SIKE1Q9BRV8 207 aa13.49□□□□□ -0.25
SDC2-203ENST00000519587 ZPBPQ9BS86 351 aa13.49□□□□□ -0.25
SDC2-203ENST00000519587 MS4A8Q9BY19 250 aa13.49□□□□□ -0.25
SDC2-203ENST00000519587 TNFRSF12AQ9NP84 129 aa13.49□□□□□ -0.25
SDC2-203ENST00000519587 FBXO8Q9NRD0 319 aa13.49□□□□□ -0.25
SDC2-203ENST00000519587 PSD3Q9NYI0 1048 aa13.49□□□□□ -0.25
SDC2-203ENST00000519587 MARCOQ9UEW3 520 aaPredicted RBP13.49□□□□□ -0.25
SDC2-203ENST00000519587 DNAJC15Q9Y5T4 150 aa13.49□□□□□ -0.25
SDC2-203ENST00000519587 KNTC1P50748 2209 aa13.49□□□□□ -0.25
SDC2-203ENST00000519587 LOC105369274A0A096LPK9 316 aa13.48□□□□□ -0.25
SDC2-203ENST00000519587 LOC102723532A0A0G2JNH3 316 aa13.48□□□□□ -0.25
SDC2-203ENST00000519587 SERTM1A2A2V5 107 aa13.48□□□□□ -0.25
SDC2-203ENST00000519587 MAGEB17A8MXT2 336 aa13.48□□□□□ -0.25
SDC2-203ENST00000519587 PIP5K1BO14986 540 aa13.48□□□□□ -0.25
SDC2-203ENST00000519587 RGS14O43566 566 aa13.48□□□□□ -0.25
SDC2-203ENST00000519587 VPS4BO75351 444 aa13.48□□□□□ -0.25
SDC2-203ENST00000519587 KITP10721 976 aa13.48□□□□□ -0.25
SDC2-203ENST00000519587 HTR6P50406 440 aa13.48□□□□□ -0.25
SDC2-203ENST00000519587 NEK2P51955 445 aa13.48□□□□□ -0.25
SDC2-203ENST00000519587 ARSFP54793 590 aa13.48□□□□□ -0.25
SDC2-203ENST00000519587 CLDN6P56747 220 aa13.48□□□□□ -0.25
SDC2-203ENST00000519587 RPS13P62277 151 aaKnown RBP13.48□□□□□ -0.25
SDC2-203ENST00000519587 TARDBPQ13148 414 aaKnown RBP eCLIP13.48□□□□□ -0.25
SDC2-203ENST00000519587 CUL3Q13618 768 aa13.48□□□□□ -0.25
SDC2-203ENST00000519587 ABRAXAS2Q15018 415 aa13.48□□□□□ -0.25
SDC2-203ENST00000519587 MUM1Q2TAK8 710 aa13.48□□□□□ -0.25
SDC2-203ENST00000519587 PRTGQ2VWP7 1150 aa13.48□□□□□ -0.25
SDC2-203ENST00000519587 FAM214AQ32MH5 1076 aa13.48□□□□□ -0.25
SDC2-203ENST00000519587 TOR1AIP1Q5JTV8 583 aa13.48□□□□□ -0.25
SDC2-203ENST00000519587 TCHHL1Q5QJ38 904 aaPredicted RBP13.48□□□□□ -0.25
SDC2-203ENST00000519587 TMEM164Q5U3C3 297 aa13.48□□□□□ -0.25
SDC2-203ENST00000519587 KHDRBS2Q5VWX1 349 aaKnown RBP13.48□□□□□ -0.25
SDC2-203ENST00000519587 TRIM40Q6P9F5 258 aa13.48□□□□□ -0.25
SDC2-203ENST00000519587 TMPRSS7Q7RTY8 843 aa13.48□□□□□ -0.25
SDC2-203ENST00000519587 TRIM46Q7Z4K8 759 aa13.48□□□□□ -0.25
SDC2-203ENST00000519587 TMEM126BQ8IUX1 230 aa13.48□□□□□ -0.25
SDC2-203ENST00000519587 OR4N4Q8N0Y3 316 aa13.48□□□□□ -0.25
SDC2-203ENST00000519587 BMPERQ8N8U9 685 aa13.48□□□□□ -0.25
SDC2-203ENST00000519587 OR1L3Q8NH93 324 aa13.48□□□□□ -0.25
SDC2-203ENST00000519587 CREB3L4Q8TEY5 395 aa13.48□□□□□ -0.25
SDC2-203ENST00000519587 GAL3ST3Q96A11 431 aa13.48□□□□□ -0.25
SDC2-203ENST00000519587 TM4SF19Q96DZ7 209 aa13.48□□□□□ -0.25
SDC2-203ENST00000519587 NDC1Q9BTX1 674 aa13.48□□□□□ -0.25
SDC2-203ENST00000519587 TRIM55Q9BYV6 548 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms