RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 CREB3L4Q8TEY5 395 aa12.6□□□□□ -0.39
VEGFA-219ENST00000518824 DCAKDQ8WVC6 231 aa12.6□□□□□ -0.39
VEGFA-219ENST00000518824 MFRPQ9BY79 579 aa12.6□□□□□ -0.39
VEGFA-219ENST00000518824 TXLNGYQ9BZA5 131 aa12.6□□□□□ -0.39
VEGFA-219ENST00000518824 ZNF552Q9H707 407 aaPredicted RBP12.6□□□□□ -0.39
VEGFA-219ENST00000518824 DNAJC11Q9NVH1 559 aa12.6□□□□□ -0.39
VEGFA-219ENST00000518824 LUZP4Q9P127 313 aa12.6□□□□□ -0.39
VEGFA-219ENST00000518824 NXT1Q9UKK6 140 aaKnown RBP12.6□□□□□ -0.39
VEGFA-219ENST00000518824 ACOT9Q9Y305 439 aa12.6□□□□□ -0.39
VEGFA-219ENST00000518824 NAALAD2Q9Y3Q0 740 aa12.6□□□□□ -0.39
VEGFA-219ENST00000518824 MAP4K5Q9Y4K4 846 aa12.6□□□□□ -0.39
VEGFA-219ENST00000518824 HEMK1Q9Y5R4 338 aaPredicted RBP12.6□□□□□ -0.39
VEGFA-219ENST00000518824 KCNE2Q9Y6J6 123 aa12.6□□□□□ -0.39
VEGFA-219ENST00000518824 IGHV3-20A0A0C4DH32 117 aa12.59□□□□□ -0.39
VEGFA-219ENST00000518824 A0A0G2JN53 185 aa12.59□□□□□ -0.39
VEGFA-219ENST00000518824 SUPT3HB4E1H0 165 aa12.59□□□□□ -0.39
VEGFA-219ENST00000518824 H0YIG0 161 aa12.59□□□□□ -0.39
VEGFA-219ENST00000518824 CCNT2O60583 730 aaKnown RBP12.59□□□□□ -0.39
VEGFA-219ENST00000518824 KERAO60938 352 aa12.59□□□□□ -0.39
VEGFA-219ENST00000518824 SUPT3HO75486 399 aa12.59□□□□□ -0.39
VEGFA-219ENST00000518824 BMP10O95393 424 aa12.59□□□□□ -0.39
VEGFA-219ENST00000518824 MAGEA12P43365 314 aa12.59□□□□□ -0.39
VEGFA-219ENST00000518824 AVPR1BP47901 424 aa12.59□□□□□ -0.39
VEGFA-219ENST00000518824 PGDP52209 483 aa12.59□□□□□ -0.39
VEGFA-219ENST00000518824 EMP2P54851 167 aa12.59□□□□□ -0.39
VEGFA-219ENST00000518824 RRADP55042 308 aa12.59□□□□□ -0.39
VEGFA-219ENST00000518824 RAB8AP61006 207 aa12.59□□□□□ -0.39
VEGFA-219ENST00000518824 DEFB134Q4QY38 66 aa12.59□□□□□ -0.39
VEGFA-219ENST00000518824 FAM219BQ5XKK7 198 aa12.59□□□□□ -0.39
VEGFA-219ENST00000518824 LANCL3Q6ZV70 420 aa12.59□□□□□ -0.39
VEGFA-219ENST00000518824 IFT20Q8IY31 132 aa12.59□□□□□ -0.39
VEGFA-219ENST00000518824 GALNT16Q8N428 558 aa12.59□□□□□ -0.39
VEGFA-219ENST00000518824 RBMXL3Q8N7X1 1067 aaKnown RBP12.59□□□□□ -0.39
VEGFA-219ENST00000518824 SNX31Q8N9S9 440 aa12.59□□□□□ -0.39
VEGFA-219ENST00000518824 STAG3L4Q8TBR4 150 aa12.59□□□□□ -0.39
VEGFA-219ENST00000518824 NT5CQ8TCD5 201 aa12.59□□□□□ -0.39
VEGFA-219ENST00000518824 UTP15Q8TED0 518 aaKnown RBP12.59□□□□□ -0.39
VEGFA-219ENST00000518824 FER1L6-AS2Q96M78 137 aa12.59□□□□□ -0.39
VEGFA-219ENST00000518824 AIF1LQ9BQI0 150 aa12.59□□□□□ -0.39
VEGFA-219ENST00000518824 TGIF2Q9GZN2 237 aa12.59□□□□□ -0.39
VEGFA-219ENST00000518824 SLC6A16Q9GZN6 736 aa12.59□□□□□ -0.39
VEGFA-219ENST00000518824 VN1R1Q9GZP7 353 aa12.59□□□□□ -0.39
VEGFA-219ENST00000518824 VPS11Q9H270 941 aa12.59□□□□□ -0.39
VEGFA-219ENST00000518824 L2HGDHQ9H9P8 463 aa12.59□□□□□ -0.39
VEGFA-219ENST00000518824 NMRAL1Q9HBL8 299 aa12.59□□□□□ -0.39
VEGFA-219ENST00000518824 MKKSQ9NPJ1 570 aaPredicted RBP12.59□□□□□ -0.39
VEGFA-219ENST00000518824 SEMA3GQ9NS98 782 aa12.59□□□□□ -0.39
VEGFA-219ENST00000518824 ZFP69BQ9UJL9 534 aa12.59□□□□□ -0.39
VEGFA-219ENST00000518824 ZNF490Q9ULM2 529 aaPredicted RBP12.59□□□□□ -0.39
VEGFA-219ENST00000518824 BAHCC1Q9P281 2608 aa12.58□□□□□ -0.39
VEGFA-219ENST00000518824 GCN1Q92616 2671 aaKnown RBP12.58□□□□□ -0.4
VEGFA-219ENST00000518824 A0A087X1B8 175 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 TRIM49D1C9J1S8 452 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 J3QKU1 62 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 MAP2K7O14733 419 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 RIPK2O43353 540 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 GALR3O60755 368 aaPredicted RBP12.58□□□□□ -0.4
VEGFA-219ENST00000518824 STK16O75716 305 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 CDC123O75794 336 aaPredicted RBP12.58□□□□□ -0.4
VEGFA-219ENST00000518824 KLHL2O95198 593 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 INHBAP08476 426 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 SLC35G6P0C7Q6 338 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 SMIM10L1P0DMW3 83 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 COX6A1P12074 109 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 GNAZP19086 355 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 TYK2P29597 1187 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 AHRP35869 848 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 XCR1P46094 333 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 SERPINB8P50452 374 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 MLLT10P55197 1068 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 TLE1Q04724 770 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 PWP1Q13610 501 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 DOC2AQ14183 400 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 IGFBP7Q16270 282 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 TECRLQ5HYJ1 363 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 TOR1AIP1Q5JTV8 583 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 CDKL4Q5MAI5 379 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 TEX35Q5T0J7 233 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 CEP128Q6ZU80 1094 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 RNF175Q8N4F7 328 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 ISL2Q96A47 359 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 PEX11GQ96HA9 241 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 SMIM10Q96HG1 83 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 IP6K3Q96PC2 410 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 SMAD5Q99717 465 aaKnown RBP12.58□□□□□ -0.4
VEGFA-219ENST00000518824 CD244Q9BZW8 370 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 ZNF160Q9HCG1 818 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 ANKHQ9HCJ1 492 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 GPR83Q9NYM4 423 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 NUDT4Q9NZJ9 180 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 MKL2Q9ULH7 1088 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 CSAG2Q9Y5P2 127 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 SLC22A7Q9Y694 548 aa12.58□□□□□ -0.4
VEGFA-219ENST00000518824 A0A087WUV0 522 aaPredicted RBP12.57□□□□□ -0.4
VEGFA-219ENST00000518824 FOXO6A8MYZ6 492 aa12.57□□□□□ -0.4
VEGFA-219ENST00000518824 PRPF4O43172 522 aaKnown RBP eCLIP12.57□□□□□ -0.45e-8■■■□□ 16
VEGFA-219ENST00000518824 CHST10O43529 356 aa12.57□□□□□ -0.4
VEGFA-219ENST00000518824 HEXBP07686 556 aa12.57□□□□□ -0.4
VEGFA-219ENST00000518824 ACPPP15309 386 aa12.57□□□□□ -0.4
VEGFA-219ENST00000518824 ALOX12P18054 663 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms