RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 TRBC2A0A5B9 178 aa10.87□□□□□ -0.67
VCAN-212ENST00000515397 C4orf51C9J302 202 aa10.87□□□□□ -0.67
VCAN-212ENST00000515397 UBXN8O00124 270 aa10.87□□□□□ -0.67
VCAN-212ENST00000515397 MAP2K7O14733 419 aa10.87□□□□□ -0.67
VCAN-212ENST00000515397 CCNT2O60583 730 aaKnown RBP10.87□□□□□ -0.67
VCAN-212ENST00000515397 SH3BGRLO75368 114 aa10.87□□□□□ -0.67
VCAN-212ENST00000515397 NSA2O95478 260 aaKnown RBP10.87□□□□□ -0.67
VCAN-212ENST00000515397 F10P00742 488 aa10.87□□□□□ -0.67
VCAN-212ENST00000515397 C1GALT1C1LP0DN25 315 aa10.87□□□□□ -0.67
VCAN-212ENST00000515397 ACPPP15309 386 aa10.87□□□□□ -0.67
VCAN-212ENST00000515397 ECHS1P30084 290 aa10.87□□□□□ -0.67
VCAN-212ENST00000515397 SCTRP47872 440 aa10.87□□□□□ -0.67
VCAN-212ENST00000515397 SLC6A12P48065 614 aa10.87□□□□□ -0.67
VCAN-212ENST00000515397 GLRBP48167 497 aa10.87□□□□□ -0.67
VCAN-212ENST00000515397 CSRP3P50461 194 aa10.87□□□□□ -0.67
VCAN-212ENST00000515397 CDKL1Q00532 357 aa10.87□□□□□ -0.67
VCAN-212ENST00000515397 REEP5Q00765 189 aa10.87□□□□□ -0.67
VCAN-212ENST00000515397 AIMP2Q13155 320 aaKnown RBP10.87□□□□□ -0.67
VCAN-212ENST00000515397 SLBPQ14493 270 aaKnown RBP eCLIP10.87□□□□□ -0.67
VCAN-212ENST00000515397 VWA5B1Q5TIE3 1220 aa10.87□□□□□ -0.67
VCAN-212ENST00000515397 SLC6A19Q695T7 634 aa10.87□□□□□ -0.67
VCAN-212ENST00000515397 SLCO4C1Q6ZQN7 724 aa10.87□□□□□ -0.67
VCAN-212ENST00000515397 ISCA2Q86U28 154 aa10.87□□□□□ -0.67
VCAN-212ENST00000515397 Q8NA96 180 aa10.87□□□□□ -0.67
VCAN-212ENST00000515397 MNS1Q8NEH6 495 aa10.87□□□□□ -0.67
VCAN-212ENST00000515397 CCT6BQ92526 530 aa10.87□□□□□ -0.67
VCAN-212ENST00000515397 KIAA1191Q96A73 305 aa10.87□□□□□ -0.67
VCAN-212ENST00000515397 TRIM44Q96DX7 344 aaPredicted RBP10.87□□□□□ -0.67
VCAN-212ENST00000515397 MAGEB10Q96LZ2 347 aaPredicted RBP10.87□□□□□ -0.67
VCAN-212ENST00000515397 CYTH2Q99418 400 aa10.87□□□□□ -0.67
VCAN-212ENST00000515397 PHACTR1Q9C0D0 580 aa10.87□□□□□ -0.67
VCAN-212ENST00000515397 VN1R1Q9GZP7 353 aa10.87□□□□□ -0.67
VCAN-212ENST00000515397 CDC42EP4Q9H3Q1 356 aaKnown RBP10.87□□□□□ -0.67
VCAN-212ENST00000515397 CLMPQ9H6B4 373 aa10.87□□□□□ -0.67
VCAN-212ENST00000515397 MKKSQ9NPJ1 570 aaPredicted RBP10.87□□□□□ -0.67
VCAN-212ENST00000515397 ZNF358Q9NW07 568 aa10.87□□□□□ -0.67
VCAN-212ENST00000515397 PLA2G3Q9NZ20 509 aa10.87□□□□□ -0.67
VCAN-212ENST00000515397 G3BP2Q9UN86 482 aaKnown RBP10.87□□□□□ -0.67
VCAN-212ENST00000515397 SETXQ7Z333 2677 aaKnown RBP10.87□□□□□ -0.67
VCAN-212ENST00000515397 HECTD1Q9ULT8 2610 aa10.87□□□□□ -0.67
VCAN-212ENST00000515397 NSG1A0A0A6YYJ2 146 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 LRRC14BA6NHZ5 514 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 SUPT3HB4E1H0 165 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 FAM227AF5H4B4 570 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 POC1B-GALNT4F8VUJ3 575 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 H0YIG0 161 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 CLGNO14967 610 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 PRPF4O43172 522 aaKnown RBP eCLIP10.86□□□□□ -0.67
VCAN-212ENST00000515397 CHST10O43529 356 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 DPM1O60762 260 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 B4GALT2O60909 372 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 SUPT3HO75486 399 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 STK16O75716 305 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 SEC24DO94855 1032 aaPredicted RBP10.86□□□□□ -0.67
VCAN-212ENST00000515397 IGHEP01854 428 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 C2P06681 752 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 RHOXF2BP0C7M4 288 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 SLC35G6P0C7Q6 338 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 COX6A1P12074 109 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 CXCR2P25025 360 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 CRABP2P29373 138 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 HNMTP50135 292 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 ATP6V0D1P61421 351 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 FOXK1P85037 733 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 HYAL2Q12891 473 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 CDC16Q13042 620 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 TOR1AIP1Q5JTV8 583 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 NDUFAF7Q7L592 441 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 TBC1D1Q86TI0 1168 aaPredicted RBP10.86□□□□□ -0.67
VCAN-212ENST00000515397 CENPLQ8N0S6 344 aaPredicted RBP10.86□□□□□ -0.67
VCAN-212ENST00000515397 CISD2Q8N5K1 135 aaKnown RBP10.86□□□□□ -0.67
VCAN-212ENST00000515397 SIRT6Q8N6T7 355 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 CATSPER1Q8NEC5 780 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 CPT1CQ8TCG5 803 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 UTP15Q8TED0 518 aaKnown RBP10.86□□□□□ -0.67
VCAN-212ENST00000515397 CREB3L4Q8TEY5 395 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 TSLPQ969D9 159 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 FMO2Q99518 471 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 AIF1LQ9BQI0 150 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 RHOXF2Q9BQY4 288 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 TGIF2Q9GZN2 237 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 PELI2Q9HAT8 420 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 SLAMF7Q9NQ25 335 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 SNX15Q9NRS6 342 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 DNAJC11Q9NVH1 559 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 PTGFRNQ9P2B2 879 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 MTRF1LQ9UGC7 380 aaKnown RBP10.86□□□□□ -0.67
VCAN-212ENST00000515397 ZFP69BQ9UJL9 534 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 PTBP2Q9UKA9 531 aaKnown RBP10.86□□□□□ -0.67
VCAN-212ENST00000515397 NFU1Q9UMS0 254 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 ACOT9Q9Y305 439 aa10.86□□□□□ -0.67
VCAN-212ENST00000515397 IGHV1-45A0A0A0MS14 117 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 H2AFYO75367 372 aaKnown RBP10.85□□□□□ -0.67
VCAN-212ENST00000515397 HPP00738 406 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 LTA4HP09960 611 aaKnown RBP10.85□□□□□ -0.67
VCAN-212ENST00000515397 FAM153BP0C7A2 387 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 PRR35P0CG20 571 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 C8orf89P0DMQ9 161 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 ITGAMP11215 1152 aa10.85□□□□□ -0.67
VCAN-212ENST00000515397 ALOX12P18054 663 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms