RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 SLC6A16Q9GZN6 736 aa20.01■□□□□ 0.79
LSM6-207ENST00000515311 PFDN4Q9NQP4 134 aa20.01■□□□□ 0.79
LSM6-207ENST00000515311 SLC39A1Q9NY26 324 aa20.01■□□□□ 0.79
LSM6-207ENST00000515311 FIS1Q9Y3D6 152 aa20.01■□□□□ 0.79
LSM6-207ENST00000515311 A0A1W2PNU3 283 aaPredicted RBP20■□□□□ 0.79
LSM6-207ENST00000515311 FAM149AA5PLN7 773 aa20■□□□□ 0.79
LSM6-207ENST00000515311 LRIT2A6NDA9 550 aa20■□□□□ 0.79
LSM6-207ENST00000515311 MAGEB17A8MXT2 336 aa20■□□□□ 0.79
LSM6-207ENST00000515311 HYAL3O43820 417 aaPredicted RBP20■□□□□ 0.79
LSM6-207ENST00000515311 EDF1O60869 148 aaKnown RBP20■□□□□ 0.79
LSM6-207ENST00000515311 TBX6O95947 436 aaPredicted RBP20■□□□□ 0.79
LSM6-207ENST00000515311 SERPIND1P05546 499 aa20■□□□□ 0.79
LSM6-207ENST00000515311 CTSBP07858 339 aa20■□□□□ 0.79
LSM6-207ENST00000515311 PTX3P26022 381 aaPredicted RBP20■□□□□ 0.79
LSM6-207ENST00000515311 SERPINB3P29508 390 aa20■□□□□ 0.79
LSM6-207ENST00000515311 ID4P47928 161 aa20■□□□□ 0.79
LSM6-207ENST00000515311 GYS2P54840 703 aa20■□□□□ 0.79
LSM6-207ENST00000515311 STXBP1P61764 594 aaKnown RBP20■□□□□ 0.79
LSM6-207ENST00000515311 HYAL2Q12891 473 aa20■□□□□ 0.79
LSM6-207ENST00000515311 CUL3Q13618 768 aa20■□□□□ 0.79
LSM6-207ENST00000515311 HKDC1Q2TB90 917 aa20■□□□□ 0.79
LSM6-207ENST00000515311 ADPRMQ3LIE5 342 aa20■□□□□ 0.79
LSM6-207ENST00000515311 LARP7Q4G0J3 582 aaKnown RBP eCLIP20■□□□□ 0.79
LSM6-207ENST00000515311 TMEM35AQ53FP2 167 aa20■□□□□ 0.79
LSM6-207ENST00000515311 YOD1Q5VVQ6 348 aaPredicted RBP20■□□□□ 0.79
LSM6-207ENST00000515311 FAM47EQ6ZV65 393 aa20■□□□□ 0.79
LSM6-207ENST00000515311 PPP1R3BQ86XI6 285 aa20■□□□□ 0.79
LSM6-207ENST00000515311 ARHGEF39Q8N4T4 335 aa20■□□□□ 0.79
LSM6-207ENST00000515311 PIWIL2Q8TC59 973 aaKnown RBP20■□□□□ 0.79
LSM6-207ENST00000515311 CCT6BQ92526 530 aa20■□□□□ 0.79
LSM6-207ENST00000515311 MTFMTQ96DP5 389 aaKnown RBP20■□□□□ 0.79
LSM6-207ENST00000515311 DDA1Q9BW61 102 aa20■□□□□ 0.79
LSM6-207ENST00000515311 SPRTNQ9H040 489 aaPredicted RBP20■□□□□ 0.79
LSM6-207ENST00000515311 PNPOQ9NVS9 261 aa20■□□□□ 0.79
LSM6-207ENST00000515311 IRAK4Q9NWZ3 460 aa20■□□□□ 0.79
LSM6-207ENST00000515311 SATB2Q9UPW6 733 aa20■□□□□ 0.79
LSM6-207ENST00000515311 RUVBL1Q9Y265 456 aaKnown RBP20■□□□□ 0.79
LSM6-207ENST00000515311 PCDHGA8Q9Y5G5 932 aa20■□□□□ 0.79
LSM6-207ENST00000515311 DCHS1Q96JQ0 3298 aa20■□□□□ 0.79
LSM6-207ENST00000515311 AGRPO00253 132 aa19.99■□□□□ 0.79
LSM6-207ENST00000515311 GCGRP47871 477 aa19.99■□□□□ 0.79
LSM6-207ENST00000515311 RPS13P62277 151 aaKnown RBP19.99■□□□□ 0.79
LSM6-207ENST00000515311 GARNL3Q5VVW2 1013 aa19.99■□□□□ 0.79
LSM6-207ENST00000515311 KHDRBS2Q5VWX1 349 aaKnown RBP19.99■□□□□ 0.79
LSM6-207ENST00000515311 FAM219BQ5XKK7 198 aa19.99■□□□□ 0.79
LSM6-207ENST00000515311 TMEM214Q6NUQ4 689 aaKnown RBP19.99■□□□□ 0.79
LSM6-207ENST00000515311 CEACAM20Q6UY09 585 aa19.99■□□□□ 0.79
LSM6-207ENST00000515311 CHSY3Q70JA7 882 aa19.99■□□□□ 0.79
LSM6-207ENST00000515311 TTC29Q8NA56 475 aaPredicted RBP19.99■□□□□ 0.79
LSM6-207ENST00000515311 TEFMQ96QE5 360 aaKnown RBP19.99■□□□□ 0.79
LSM6-207ENST00000515311 TAAR9Q96RI9 348 aa19.99■□□□□ 0.79
LSM6-207ENST00000515311 SERPINI1Q99574 410 aa19.99■□□□□ 0.79
LSM6-207ENST00000515311 ZPBPQ9BS86 351 aa19.99■□□□□ 0.79
LSM6-207ENST00000515311 ASPSCR1Q9BZE9 553 aa19.99■□□□□ 0.79
LSM6-207ENST00000515311 B3GNT4Q9C0J1 378 aa19.99■□□□□ 0.79
LSM6-207ENST00000515311 TUBB1Q9H4B7 451 aa19.99■□□□□ 0.79
LSM6-207ENST00000515311 NMRK1Q9NWW6 199 aa19.99■□□□□ 0.79
LSM6-207ENST00000515311 VTI1BQ9UEU0 232 aa19.99■□□□□ 0.79
LSM6-207ENST00000515311 PISDQ9UG56 409 aa19.99■□□□□ 0.79
LSM6-207ENST00000515311 PCDHGA3Q9Y5H0 932 aa19.99■□□□□ 0.79
LSM6-207ENST00000515311 HYKKA2RU49 373 aa19.98■□□□□ 0.79
LSM6-207ENST00000515311 URADA6NGE7 173 aa19.98■□□□□ 0.79
LSM6-207ENST00000515311 HDAC3O15379 428 aa19.98■□□□□ 0.79
LSM6-207ENST00000515311 TGFB1P01137 390 aa19.98■□□□□ 0.79
LSM6-207ENST00000515311 STATHP02808 62 aa19.98■□□□□ 0.79
LSM6-207ENST00000515311 SPTBP11277 2137 aa19.98■□□□□ 0.79
LSM6-207ENST00000515311 ITIH1P19827 911 aa19.98■□□□□ 0.79
LSM6-207ENST00000515311 HNRNPH1P31943 449 aaKnown RBP19.98■□□□□ 0.79
LSM6-207ENST00000515311 ETV5P41161 510 aa19.98■□□□□ 0.79
LSM6-207ENST00000515311 ARFIP1P53367 373 aa19.98■□□□□ 0.79
LSM6-207ENST00000515311 FAM214AQ32MH5 1076 aa19.98■□□□□ 0.79
LSM6-207ENST00000515311 TUBB8Q3ZCM7 444 aa19.98■□□□□ 0.79
LSM6-207ENST00000515311 C3orf38Q5JPI3 329 aa19.98■□□□□ 0.79
LSM6-207ENST00000515311 DCAF12Q5T6F0 453 aa19.98■□□□□ 0.79
LSM6-207ENST00000515311 DEPDC1Q5TB30 811 aa19.98■□□□□ 0.79
LSM6-207ENST00000515311 RNF175Q8N4F7 328 aa19.98■□□□□ 0.79
LSM6-207ENST00000515311 KCT2Q8NC54 265 aa19.98■□□□□ 0.79
LSM6-207ENST00000515311 GAL3ST3Q96A11 431 aa19.98■□□□□ 0.79
LSM6-207ENST00000515311 MS4A6EQ96DS6 147 aa19.98■□□□□ 0.79
LSM6-207ENST00000515311 ZNF317Q96PQ6 595 aaPredicted RBP19.98■□□□□ 0.79
LSM6-207ENST00000515311 HBEGFQ99075 208 aa19.98■□□□□ 0.79
LSM6-207ENST00000515311 MACROD1Q9BQ69 325 aa19.98■□□□□ 0.79
LSM6-207ENST00000515311 CENPKQ9BS16 269 aa19.98■□□□□ 0.79
LSM6-207ENST00000515311 ACPTQ9BZG2 426 aa19.98■□□□□ 0.79
LSM6-207ENST00000515311 POLR1BQ9H9Y6 1135 aa19.98■□□□□ 0.79
LSM6-207ENST00000515311 APMAPQ9HDC9 416 aa19.98■□□□□ 0.79
LSM6-207ENST00000515311 PRM3Q9NNZ6 103 aa19.98■□□□□ 0.79
LSM6-207ENST00000515311 STARD5Q9NSY2 213 aa19.98■□□□□ 0.79
LSM6-207ENST00000515311 SRPK3Q9UPE1 567 aa19.98■□□□□ 0.79
LSM6-207ENST00000515311 PCDHB3Q9Y5E6 796 aa19.98■□□□□ 0.79
LSM6-207ENST00000515311 SLC22A7Q9Y694 548 aa19.98■□□□□ 0.79
LSM6-207ENST00000515311 PMS2P1A4D2B8 440 aa19.97■□□□□ 0.79
LSM6-207ENST00000515311 SLC28A1O00337 649 aa19.97■□□□□ 0.79
LSM6-207ENST00000515311 PIP5K1BO14986 540 aa19.97■□□□□ 0.79
LSM6-207ENST00000515311 SEMA3DO95025 777 aa19.97■□□□□ 0.79
LSM6-207ENST00000515311 VIMP08670 466 aaKnown RBP19.97■□□□□ 0.79
LSM6-207ENST00000515311 MAPK10P53779 464 aa19.97■□□□□ 0.79
LSM6-207ENST00000515311 ARSFP54793 590 aa19.97■□□□□ 0.79
LSM6-207ENST00000515311 NDUFA9Q16795 377 aa19.97■□□□□ 0.79
LSM6-207ENST00000515311 XKR7Q5GH72 579 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms