RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 CSNK1G2P78368 415 aa14.32□□□□□ -0.12
VCAN-211ENST00000513984 TFF2Q03403 129 aa14.32□□□□□ -0.12
VCAN-211ENST00000513984 PRKCQQ04759 706 aa14.32□□□□□ -0.12
VCAN-211ENST00000513984 SLC14A1Q13336 389 aa14.32□□□□□ -0.12
VCAN-211ENST00000513984 ATP6AP1Q15904 470 aa14.32□□□□□ -0.12
VCAN-211ENST00000513984 INTS11Q5TA45 600 aaKnown RBP14.32□□□□□ -0.12
VCAN-211ENST00000513984 DEPDC1Q5TB30 811 aa14.32□□□□□ -0.12
VCAN-211ENST00000513984 KHDRBS2Q5VWX1 349 aaKnown RBP14.32□□□□□ -0.12
VCAN-211ENST00000513984 IKBIPQ70UQ0 350 aa14.32□□□□□ -0.12
VCAN-211ENST00000513984 R3HCC1LQ7Z5L2 792 aaKnown RBP14.32□□□□□ -0.12
VCAN-211ENST00000513984 GALNT4Q8N4A0 578 aa14.32□□□□□ -0.12
VCAN-211ENST00000513984 TMEM145Q8NBT3 493 aa14.32□□□□□ -0.12
VCAN-211ENST00000513984 SNX19Q92543 992 aa14.32□□□□□ -0.12
VCAN-211ENST00000513984 MTERF3Q96E29 417 aa14.32□□□□□ -0.12
VCAN-211ENST00000513984 ZNF717Q9BY31 904 aaPredicted RBP14.32□□□□□ -0.12
VCAN-211ENST00000513984 Q9H521 79 aa14.32□□□□□ -0.12
VCAN-211ENST00000513984 POLMQ9NP87 494 aaPredicted RBP14.32□□□□□ -0.12
VCAN-211ENST00000513984 AHSPQ9NZD4 102 aa14.32□□□□□ -0.12
VCAN-211ENST00000513984 PCOLCE2Q9UKZ9 415 aa14.32□□□□□ -0.12
VCAN-211ENST00000513984 NDRG2Q9UN36 371 aaKnown RBP14.32□□□□□ -0.12
VCAN-211ENST00000513984 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.32□□□□□ -0.12
VCAN-211ENST00000513984 HS3ST3A1Q9Y663 406 aa14.32□□□□□ -0.12
VCAN-211ENST00000513984 TRIOBPQ9H2D6 2365 aa14.32□□□□□ -0.12
VCAN-211ENST00000513984 IGKV1-8A0A0C4DH67 115 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 CLIC1O00299 241 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 PLPP1O14494 284 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 TOR1BO14657 336 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 SCAMP1O15126 338 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 TPST1O60507 370 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 GBAP04062 536 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 KLK1P06870 262 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 TDGQ13569 410 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 ZNF385BQ569K4 471 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 PPP4R4Q6NUP7 873 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 Q6ZS52 159 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 ZNF551Q7Z340 670 aaPredicted RBP14.31□□□□□ -0.12
VCAN-211ENST00000513984 EPHX4Q8IUS5 362 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 MARVELD2Q8N4S9 558 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 PACRGLQ8N7B6 248 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 POP5Q969H6 163 aaKnown RBP14.31□□□□□ -0.12
VCAN-211ENST00000513984 SEPHS2Q99611 448 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 SLC29A1Q99808 456 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 CENPKQ9BS16 269 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 ATAD3AQ9NVI7 634 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 TBC1D29Q9UFV1 150 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 AP4B1Q9Y6B7 739 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 COLEC10Q9Y6Z7 277 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 FEZF1A0PJY2 475 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 C1orf226A1L170 272 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 MAN2B1O00754 1011 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 TXNDC9O14530 226 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 CPSF4O95639 269 aaKnown RBP14.31□□□□□ -0.12
VCAN-211ENST00000513984 RAP2AP10114 183 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 ENGP17813 658 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 NDUFS1P28331 727 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 TPP2P29144 1249 aaPredicted RBP14.31□□□□□ -0.12
VCAN-211ENST00000513984 CCR5P51681 352 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 DGKEP52429 567 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 TAS2R50P59544 299 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 SMAD2Q15796 467 aaKnown RBP14.31□□□□□ -0.12
VCAN-211ENST00000513984 FAM98BQ52LJ0 330 aaKnown RBP14.31□□□□□ -0.12
VCAN-211ENST00000513984 ZBTB49Q6ZSB9 765 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 ZNF621Q6ZSS3 439 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 GOT1L1Q8NHS2 421 aaPredicted RBP14.31□□□□□ -0.12
VCAN-211ENST00000513984 TSACCQ96A04 125 aaPredicted RBP14.31□□□□□ -0.12
VCAN-211ENST00000513984 RNF145Q96MT1 663 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 CHID1Q9BWS9 393 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 UGT2B28Q9BY64 529 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 SH3BP4Q9P0V3 963 aa14.31□□□□□ -0.12
VCAN-211ENST00000513984 PNMA8BQ9ULN7 279 aaPredicted RBP14.31□□□□□ -0.12
VCAN-211ENST00000513984 GOLGA4Q13439 2230 aaKnown RBP14.3□□□□□ -0.12
VCAN-211ENST00000513984 PRAMEF33A0A0G2JMD5 474 aa14.3□□□□□ -0.12
VCAN-211ENST00000513984 A0A1W2PPC1 479 aa14.3□□□□□ -0.12
VCAN-211ENST00000513984 C7orf72A4D263 438 aa14.3□□□□□ -0.12
VCAN-211ENST00000513984 FAM149AA5PLN7 773 aa14.3□□□□□ -0.12
VCAN-211ENST00000513984 CREG1O75629 220 aa14.3□□□□□ -0.12
VCAN-211ENST00000513984 LYNP07948 512 aa14.3□□□□□ -0.12
VCAN-211ENST00000513984 CHRNB1P11230 501 aa14.3□□□□□ -0.12
VCAN-211ENST00000513984 CKMT2P17540 419 aa14.3□□□□□ -0.12
VCAN-211ENST00000513984 IL1RNP18510 177 aa14.3□□□□□ -0.12
VCAN-211ENST00000513984 PPIBP23284 216 aaKnown RBP14.3□□□□□ -0.12
VCAN-211ENST00000513984 AK4P27144 223 aaPredicted RBP14.3□□□□□ -0.12
VCAN-211ENST00000513984 CYP4F2P78329 520 aa14.3□□□□□ -0.12
VCAN-211ENST00000513984 ABATP80404 500 aa14.3□□□□□ -0.12
VCAN-211ENST00000513984 C2orf80Q0P641 193 aa14.3□□□□□ -0.12
VCAN-211ENST00000513984 NRF1Q16656 503 aa14.3□□□□□ -0.12
VCAN-211ENST00000513984 ABI3BPQ7Z7G0 1075 aa14.3□□□□□ -0.12
VCAN-211ENST00000513984 TTLQ8NG68 377 aa14.3□□□□□ -0.12
VCAN-211ENST00000513984 FAM162AQ96A26 154 aa14.3□□□□□ -0.12
VCAN-211ENST00000513984 C9orf16Q9BUW7 83 aa14.3□□□□□ -0.12
VCAN-211ENST00000513984 C8orf4Q9NR00 106 aa14.3□□□□□ -0.12
VCAN-211ENST00000513984 DCAF13Q9NV06 445 aaKnown RBP14.3□□□□□ -0.12
VCAN-211ENST00000513984 OLAHQ9NV23 265 aa14.3□□□□□ -0.12
VCAN-211ENST00000513984 ZNF282Q9UDV7 671 aaPredicted RBP14.3□□□□□ -0.12
VCAN-211ENST00000513984 WBP11Q9Y2W2 641 aaKnown RBP14.3□□□□□ -0.12
VCAN-211ENST00000513984 V9GYQ6 96 aa14.3□□□□□ -0.12
VCAN-211ENST00000513984 TRBC2A0A5B9 178 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 A6NCN8 305 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 SAC3D1A6NKF1 404 aa14.29□□□□□ -0.12
VCAN-211ENST00000513984 EIF4E1BA6NMX2 242 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms