RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	SERPIND1	P05546	499 aa		13.85	□□□□□ -0.19
MATR3-238	ENST00000512107	SLC5A2	P31639	672 aa		13.85	□□□□□ -0.19
MATR3-238	ENST00000512107	AHR	P35869	848 aa		13.85	□□□□□ -0.19
MATR3-238	ENST00000512107	ARL1	P40616	181 aa	Predicted RBP	13.85	□□□□□ -0.19
MATR3-238	ENST00000512107	SLC1A6	P48664	564 aa		13.85	□□□□□ -0.19
MATR3-238	ENST00000512107	PKNOX1	P55347	436 aa		13.85	□□□□□ -0.19
MATR3-238	ENST00000512107	OCRL	Q01968	901 aa		13.85	□□□□□ -0.19
MATR3-238	ENST00000512107	GPS2	Q13227	327 aa		13.85	□□□□□ -0.19
MATR3-238	ENST00000512107	SRSF6	Q13247	344 aa	Known RBP	13.85	□□□□□ -0.19
MATR3-238	ENST00000512107	STX3	Q13277	289 aa		13.85	□□□□□ -0.19
MATR3-238	ENST00000512107	ABRAXAS2	Q15018	415 aa		13.85	□□□□□ -0.19
MATR3-238	ENST00000512107	TOR1AIP1	Q5JTV8	583 aa		13.85	□□□□□ -0.19
MATR3-238	ENST00000512107	C1orf189	Q5VU69	101 aa		13.85	□□□□□ -0.19
MATR3-238	ENST00000512107	KANK2	Q63ZY3	851 aa		13.85	□□□□□ -0.19
MATR3-238	ENST00000512107	TTC19	Q6DKK2	380 aa	Predicted RBP	13.85	□□□□□ -0.19
MATR3-238	ENST00000512107	TMEM214	Q6NUQ4	689 aa	Known RBP	13.85	□□□□□ -0.19
MATR3-238	ENST00000512107	PPP1R3B	Q86XI6	285 aa		13.85	□□□□□ -0.19
MATR3-238	ENST00000512107	ZCCHC10	Q8TBK6	192 aa		13.85	□□□□□ -0.19
MATR3-238	ENST00000512107	UTP15	Q8TED0	518 aa	Known RBP	13.85	□□□□□ -0.19
MATR3-238	ENST00000512107	CKAP2	Q8WWK9	683 aa		13.85	□□□□□ -0.19
MATR3-238	ENST00000512107	SLC13A3	Q8WWT9	602 aa		13.85	□□□□□ -0.19
MATR3-238	ENST00000512107	MS4A8	Q9BY19	250 aa		13.85	□□□□□ -0.19
MATR3-238	ENST00000512107	ZNF717	Q9BY31	904 aa	Predicted RBP	13.85	□□□□□ -0.19
MATR3-238	ENST00000512107	NRSN2	Q9GZP1	204 aa		13.85	□□□□□ -0.19
MATR3-238	ENST00000512107	OR51B5	Q9H339	312 aa		13.85	□□□□□ -0.19
MATR3-238	ENST00000512107	SLCO1B3	Q9NPD5	702 aa		13.85	□□□□□ -0.19
MATR3-238	ENST00000512107	DMRT3	Q9NQL9	472 aa		13.85	□□□□□ -0.19
MATR3-238	ENST00000512107	FIS1	Q9Y3D6	152 aa		13.85	□□□□□ -0.19
MATR3-238	ENST00000512107	PCDHGA3	Q9Y5H0	932 aa		13.85	□□□□□ -0.19
MATR3-238	ENST00000512107	HYKK	A2RU49	373 aa		13.84	□□□□□ -0.19
MATR3-238	ENST00000512107	LRIT2	A6NDA9	550 aa		13.84	□□□□□ -0.19
MATR3-238	ENST00000512107	RTCA	O00442	366 aa	Known RBP	13.84	□□□□□ -0.19
MATR3-238	ENST00000512107	ZSCAN9	O15535	394 aa	Predicted RBP	13.84	□□□□□ -0.19
MATR3-238	ENST00000512107	NDUFS4	O43181	175 aa		13.84	□□□□□ -0.19
MATR3-238	ENST00000512107	TLX3	O43711	291 aa	Predicted RBP	13.84	□□□□□ -0.19
MATR3-238	ENST00000512107	SRPX2	O60687	465 aa	Predicted RBP	13.84	□□□□□ -0.19
MATR3-238	ENST00000512107	SCRG1	O75711	98 aa		13.84	□□□□□ -0.19
MATR3-238	ENST00000512107	ZNF888	P0CJ79	500 aa	Predicted RBP	13.84	□□□□□ -0.19
MATR3-238	ENST00000512107	RORA	P35398	523 aa		13.84	□□□□□ -0.19
MATR3-238	ENST00000512107	RAB8A	P61006	207 aa		13.84	□□□□□ -0.19
MATR3-238	ENST00000512107	EIF3I	Q13347	325 aa	Known RBP	13.84	□□□□□ -0.19
MATR3-238	ENST00000512107	LAPTM5	Q13571	262 aa		13.84	□□□□□ -0.19
MATR3-238	ENST00000512107	IL11RA	Q14626	422 aa		13.84	□□□□□ -0.19
MATR3-238	ENST00000512107	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	13.84	□□□□□ -0.19	1e-53	■■■■□ 19.5
MATR3-238	ENST00000512107	RIPOR1	Q6ZS17	1223 aa		13.84	□□□□□ -0.19
MATR3-238	ENST00000512107	COX15	Q7KZN9	410 aa		13.84	□□□□□ -0.19
MATR3-238	ENST00000512107	KRT78	Q8N1N4	520 aa		13.84	□□□□□ -0.19
MATR3-238	ENST00000512107	AFAP1L2	Q8N4X5	818 aa		13.84	□□□□□ -0.19
MATR3-238	ENST00000512107	GALNT6	Q8NCL4	622 aa		13.84	□□□□□ -0.19
MATR3-238	ENST00000512107	OR2T11	Q8NH01	316 aa		13.84	□□□□□ -0.19
MATR3-238	ENST00000512107	GATA6	Q92908	595 aa		13.84	□□□□□ -0.19
MATR3-238	ENST00000512107	MS4A6E	Q96DS6	147 aa		13.84	□□□□□ -0.19
MATR3-238	ENST00000512107	THAP11	Q96EK4	314 aa		13.84	□□□□□ -0.19
MATR3-238	ENST00000512107	C3orf30	Q96M34	536 aa		13.84	□□□□□ -0.19
MATR3-238	ENST00000512107	QRFPR	Q96P65	431 aa		13.84	□□□□□ -0.19
MATR3-238	ENST00000512107	DDA1	Q9BW61	102 aa		13.84	□□□□□ -0.19
MATR3-238	ENST00000512107	MANSC1	Q9H8J5	431 aa		13.84	□□□□□ -0.19
MATR3-238	ENST00000512107	INTS9	Q9NV88	658 aa	Known RBP	13.84	□□□□□ -0.19
MATR3-238	ENST00000512107	GIMAP2	Q9UG22	337 aa		13.84	□□□□□ -0.19
MATR3-238	ENST00000512107	CCL27	Q9Y4X3	112 aa		13.84	□□□□□ -0.19
MATR3-238	ENST00000512107	CCDC88C	Q9P219	2028 aa		13.84	□□□□□ -0.19
MATR3-238	ENST00000512107	TMEM114	B3SHH9	223 aa		13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	AZIN1	O14977	448 aa		13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	CNOT3	O75175	753 aa	Known RBP	13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	CLEC3A	O75596	197 aa		13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	DXO	O77932	396 aa	Known RBP	13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	STK17B	O94768	372 aa		13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	IL1RN	P18510	177 aa		13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	GRK3	P35626	688 aa		13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	OR1D4	P47884	311 aa		13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	EFNA3	P52797	238 aa		13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	HMGCS1	Q01581	520 aa		13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	GUCY1A3	Q02108	690 aa		13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	NAA25	Q14CX7	972 aa		13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	TGIF1	Q15583	401 aa		13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	SYT16	Q17RD7	645 aa		13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	ADPRM	Q3LIE5	342 aa		13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	SH2D4B	Q5SQS7	431 aa		13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	DCAF12	Q5T6F0	453 aa		13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	FAM69B	Q5VUD6	431 aa		13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	FRG2	Q64ET8	278 aa		13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	FAM199X	Q6PEV8	388 aa	Predicted RBP	13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	IGF2-AS	Q6U949	168 aa		13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	ZNF793	Q6ZN11	406 aa		13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	MAVS	Q7Z434	540 aa		13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	TMEM126B	Q8IUX1	230 aa		13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	OR5T3	Q8NGG3	340 aa		13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	METTL6	Q8TCB7	284 aa		13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	CCT6B	Q92526	530 aa		13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	GBP5	Q96PP8	586 aa		13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	TEFM	Q96QE5	360 aa	Known RBP	13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	FRG2B	Q96QU4	278 aa		13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	SLC29A3	Q9BZD2	475 aa		13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	ACPT	Q9BZG2	426 aa		13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	PRDM7	Q9NQW5	492 aa		13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	CUTC	Q9NTM9	273 aa		13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	AKAP7	Q9P0M2	348 aa	Predicted RBP	13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	HAO1	Q9UJM8	370 aa		13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	SERTAD3	Q9UJW9	196 aa		13.83	□□□□□ -0.2
MATR3-238	ENST00000512107	TSC22D4	Q9Y3Q8	395 aa		13.83	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms