RNA–Protein interactions for RNA: ENST00000511496.5

LIMCH1-213, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 3,439 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-213ENST00000511496 GPR155Q7Z3F1 870 aa11.64□□□□□ -0.55
LIMCH1-213ENST00000511496 BMP8AQ7Z5Y6 402 aa11.64□□□□□ -0.55
LIMCH1-213ENST00000511496 PGBD3Q8N328 593 aa11.64□□□□□ -0.55
LIMCH1-213ENST00000511496 GPR156Q8NFN8 814 aa11.64□□□□□ -0.55
LIMCH1-213ENST00000511496 OR2T4Q8NH00 348 aa11.64□□□□□ -0.55
LIMCH1-213ENST00000511496 CREB3L4Q8TEY5 395 aa11.64□□□□□ -0.55
LIMCH1-213ENST00000511496 FUBP1Q96AE4 644 aaKnown RBP11.64□□□□□ -0.55
LIMCH1-213ENST00000511496 CRELD1Q96HD1 420 aa11.64□□□□□ -0.55
LIMCH1-213ENST00000511496 TREX2Q9BQ50 279 aaPredicted RBP11.64□□□□□ -0.55
LIMCH1-213ENST00000511496 TCF25Q9BQ70 676 aa11.64□□□□□ -0.55
LIMCH1-213ENST00000511496 AGO4Q9HCK5 861 aaKnown RBP11.64□□□□□ -0.55
LIMCH1-213ENST00000511496 KIF25Q9UIL4 384 aa11.64□□□□□ -0.55
LIMCH1-213ENST00000511496 TSPAN16Q9UKR8 245 aa11.64□□□□□ -0.55
LIMCH1-213ENST00000511496 SLC6A14Q9UN76 642 aa11.64□□□□□ -0.55
LIMCH1-213ENST00000511496 DTX4Q9Y2E6 619 aa11.64□□□□□ -0.55
LIMCH1-213ENST00000511496 NCF1BA6NI72 391 aaPredicted RBP11.64□□□□□ -0.55
LIMCH1-213ENST00000511496 NCF1CA8MVU1 366 aaPredicted RBP11.64□□□□□ -0.55
LIMCH1-213ENST00000511496 SCELO95171 688 aa11.64□□□□□ -0.55
LIMCH1-213ENST00000511496 DHFRP00374 187 aa11.64□□□□□ -0.55
LIMCH1-213ENST00000511496 NCF1P14598 390 aaPredicted RBP11.64□□□□□ -0.55
LIMCH1-213ENST00000511496 EXOC3L2Q2M3D2 409 aa11.64□□□□□ -0.55
LIMCH1-213ENST00000511496 INO80DQ53TQ3 878 aaPredicted RBP11.64□□□□□ -0.55
LIMCH1-213ENST00000511496 CNIH2Q6PI25 160 aa11.64□□□□□ -0.55
LIMCH1-213ENST00000511496 C3P1Q6ZMU1 363 aa11.64□□□□□ -0.55
LIMCH1-213ENST00000511496 B3GNT7Q8NFL0 401 aa11.64□□□□□ -0.55
LIMCH1-213ENST00000511496 SFT2D1Q8WV19 159 aa11.64□□□□□ -0.55
LIMCH1-213ENST00000511496 ESAMQ96AP7 390 aa11.64□□□□□ -0.55
LIMCH1-213ENST00000511496 OTUB1Q96FW1 271 aaPredicted RBP11.64□□□□□ -0.55
LIMCH1-213ENST00000511496 TMEM176AQ96HP8 235 aa11.64□□□□□ -0.55
LIMCH1-213ENST00000511496 NMUR1Q9HB89 426 aa11.64□□□□□ -0.55
LIMCH1-213ENST00000511496 IMPAD1Q9NX62 359 aa11.64□□□□□ -0.55
LIMCH1-213ENST00000511496 CDH10Q9Y6N8 788 aa11.64□□□□□ -0.55
LIMCH1-213ENST00000511496 SLC35F4A4IF30 521 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 ERI2A8K979 691 aaKnown RBP11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 CD3EAPO15446 510 aaKnown RBP11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 PIK3CGP48736 1102 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 FGL1Q08830 312 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 CAMK1Q14012 370 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 SERTAD2Q14140 314 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 UAP1L1Q3KQV9 507 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 TKFCQ3LXA3 575 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 RBMS3Q6XE24 437 aaKnown RBP11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 USP50Q70EL3 339 aaPredicted RBP11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 ZFAND4Q86XD8 727 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 OR2T35Q8NGX2 323 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 MOSPD2Q8NHP6 518 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 CLEC4CQ8WTT0 213 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 CCDC17Q96LX7 622 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 ERMAPQ96PL5 475 aaPredicted RBP11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 PKMYT1Q99640 499 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 WDR77Q9BQA1 342 aaPredicted RBP11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 CHIAQ9BZP6 476 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 RC3H2Q9HBD1 1191 aaKnown RBP11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 B3GAT2Q9NPZ5 323 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 PRMT8Q9NR22 394 aaPredicted RBP11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 GPR160Q9UJ42 338 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 MKL2Q9ULH7 1088 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 DUSP12Q9UNI6 340 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 ADRB1P08588 477 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 G6PDP11413 515 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 DNAJA1P31689 397 aaKnown RBP11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 GSTM5P46439 218 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 CCINQ13939 588 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 OPCMLQ14982 345 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 KANK2Q63ZY3 851 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 RGS7BPQ6MZT1 257 aaPredicted RBP11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 ZNF367Q7RTV3 350 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 ISCA2Q86U28 154 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 SPATA22Q8NHS9 363 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 SH3RF2Q8TEC5 729 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 UCN3Q969E3 161 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 KIAA1191Q96A73 305 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 FAM120BQ96EK7 910 aaKnown RBP11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 ANKRA2Q9H9E1 313 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 ERAP1Q9NZ08 941 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 NYAP2Q9P242 653 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 SEC14L4Q9UDX3 406 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 SSR3Q9UNL2 185 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 JCHAINP01591 159 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 EDN1P05305 212 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 FGF4P08620 206 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 CRHR2Q13324 411 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 ZSWIM7Q19AV6 140 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 PABPC1L2AQ5JQF8 200 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 MANEALQ5VSG8 457 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 KIAA0319Q5VV43 1072 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 C22orf42Q6IC83 251 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 IPMKQ8NFU5 416 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 AKT1S1Q96B36 256 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 C10orf90Q96M02 699 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 TMEM209Q96SK2 561 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 APOL5Q9BWW9 433 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 OSGEPL1Q9H4B0 414 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 NUDT15Q9NV35 164 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 SLCO1C1Q9NYB5 712 aa11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 PURGQ9UJV8 347 aaKnown RBP11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 EXO1Q9UQ84 846 aaKnown RBP11.63□□□□□ -0.55
LIMCH1-213ENST00000511496 PQLC2LA1A4F0 135 aa11.62□□□□□ -0.55
LIMCH1-213ENST00000511496 PMS2P1A4D2B8 440 aa11.62□□□□□ -0.55
LIMCH1-213ENST00000511496 A8MXK9 166 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms