RNA–Protein interactions for RNA: ENST00000511013.2

AP003555.1-202, humanhuman

TSL 1 (best) BASIC

Gene AP003555.1, Length 1,755 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003555.1-202ENST00000511013 MARK1Q9P0L2 795 aa13.71□□□□□ -0.22
AP003555.1-202ENST00000511013 ATP11BQ9Y2G3 1177 aa13.71□□□□□ -0.22
AP003555.1-202ENST00000511013 COQ6Q9Y2Z9 468 aa13.71□□□□□ -0.22
AP003555.1-202ENST00000511013 DGKBQ9Y6T7 804 aa13.71□□□□□ -0.22
AP003555.1-202ENST00000511013 PCM1Q15154 2024 aa13.7□□□□□ -0.22
AP003555.1-202ENST00000511013 DOCK6Q96HP0 2047 aa13.7□□□□□ -0.22
AP003555.1-202ENST00000511013 PSMB9P28065 219 aa13.7□□□□□ -0.22
AP003555.1-202ENST00000511013 CD6P30203 668 aa13.7□□□□□ -0.22
AP003555.1-202ENST00000511013 MMP12P39900 470 aa13.7□□□□□ -0.22
AP003555.1-202ENST00000511013 OPRL1P41146 370 aa13.7□□□□□ -0.22
AP003555.1-202ENST00000511013 MAP2K4P45985 399 aa13.7□□□□□ -0.22
AP003555.1-202ENST00000511013 MLLT10P55197 1068 aa13.7□□□□□ -0.22
AP003555.1-202ENST00000511013 SELENOWP63302 87 aa13.7□□□□□ -0.22
AP003555.1-202ENST00000511013 ZNF763Q0D2J5 394 aa13.7□□□□□ -0.22
AP003555.1-202ENST00000511013 CAMK2GQ13555 558 aaPredicted RBP13.7□□□□□ -0.22
AP003555.1-202ENST00000511013 TEAD2Q15562 447 aa13.7□□□□□ -0.22
AP003555.1-202ENST00000511013 SF1Q15637 639 aaKnown RBP13.7□□□□□ -0.22
AP003555.1-202ENST00000511013 TMEM215Q68D42 235 aa13.7□□□□□ -0.22
AP003555.1-202ENST00000511013 LIPIQ6XZB0 460 aa13.7□□□□□ -0.22
AP003555.1-202ENST00000511013 IGFN1Q86VF2 1251 aa13.7□□□□□ -0.22
AP003555.1-202ENST00000511013 LINC00597Q9H2U6 94 aa13.7□□□□□ -0.22
AP003555.1-202ENST00000511013 EHD1Q9H4M9 534 aa13.7□□□□□ -0.22
AP003555.1-202ENST00000511013 ACOT13Q9NPJ3 140 aa13.7□□□□□ -0.22
AP003555.1-202ENST00000511013 HCFC1R1Q9NWW0 138 aa13.7□□□□□ -0.22
AP003555.1-202ENST00000511013 IRAK4Q9NWZ3 460 aa13.7□□□□□ -0.22
AP003555.1-202ENST00000511013 TNFRSF11BO00300 401 aa13.69□□□□□ -0.22
AP003555.1-202ENST00000511013 SLC9A3R1O14745 358 aaPredicted RBP13.69□□□□□ -0.22
AP003555.1-202ENST00000511013 C1orf105O95561 183 aa13.69□□□□□ -0.22
AP003555.1-202ENST00000511013 IFNA14P01570 189 aa13.69□□□□□ -0.22
AP003555.1-202ENST00000511013 NTRK1P04629 796 aa13.69□□□□□ -0.22
AP003555.1-202ENST00000511013 NUDT7P0C024 238 aa13.69□□□□□ -0.22
AP003555.1-202ENST00000511013 C1GALT1C1LP0DN25 315 aa13.69□□□□□ -0.22
AP003555.1-202ENST00000511013 ANXA8P13928 327 aa13.69□□□□□ -0.22
AP003555.1-202ENST00000511013 ITGA2P17301 1181 aa13.69□□□□□ -0.22
AP003555.1-202ENST00000511013 SYN1P17600 705 aa13.69□□□□□ -0.22
AP003555.1-202ENST00000511013 NR4A1P22736 598 aa13.69□□□□□ -0.22
AP003555.1-202ENST00000511013 FCHO2Q0JRZ9 810 aa13.69□□□□□ -0.22
AP003555.1-202ENST00000511013 FADDQ13158 208 aa13.69□□□□□ -0.22
AP003555.1-202ENST00000511013 BCL7AQ4VC05 210 aa13.69□□□□□ -0.22
AP003555.1-202ENST00000511013 IFI44LQ53G44 452 aa13.69□□□□□ -0.22
AP003555.1-202ENST00000511013 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.69□□□□□ -0.22
AP003555.1-202ENST00000511013 NIPAL1Q6NVV3 410 aa13.69□□□□□ -0.22
AP003555.1-202ENST00000511013 CCDC81Q6ZN84 652 aa13.69□□□□□ -0.22
AP003555.1-202ENST00000511013 TMPRSS11BQ86T26 416 aa13.69□□□□□ -0.22
AP003555.1-202ENST00000511013 SYTL1Q8IYJ3 562 aa13.69□□□□□ -0.22
AP003555.1-202ENST00000511013 NAGSQ8N159 534 aa13.69□□□□□ -0.22
AP003555.1-202ENST00000511013 NAT16Q8N8M0 369 aa13.69□□□□□ -0.22
AP003555.1-202ENST00000511013 GPR156Q8NFN8 814 aa13.69□□□□□ -0.22
AP003555.1-202ENST00000511013 SPPL2AQ8TCT8 520 aa13.69□□□□□ -0.22
AP003555.1-202ENST00000511013 CYB5D2Q8WUJ1 264 aa13.69□□□□□ -0.22
AP003555.1-202ENST00000511013 NEIL2Q969S2 332 aa13.69□□□□□ -0.22
AP003555.1-202ENST00000511013 MTERF3Q96E29 417 aa13.69□□□□□ -0.22
AP003555.1-202ENST00000511013 TCEAL4Q96EI5 215 aa13.69□□□□□ -0.22
AP003555.1-202ENST00000511013 PLCXD1Q9NUJ7 323 aa13.69□□□□□ -0.22
AP003555.1-202ENST00000511013 TDRKHQ9Y2W6 561 aaKnown RBP13.69□□□□□ -0.22
AP003555.1-202ENST00000511013 CORINQ9Y5Q5 1042 aa13.69□□□□□ -0.22
AP003555.1-202ENST00000511013 CTSLP07711 333 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 CLTBP09497 229 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 RRM2P31350 389 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 CRATP43155 626 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 PXNP49023 591 aaPredicted RBP13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 GAB1Q13480 694 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 ZNF77Q15935 545 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 GCNT6Q5T4J0 391 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 MLIPQ5VWP3 458 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 LAIR1Q6GTX8 287 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 TRIM40Q6P9F5 258 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 CCDC80Q76M96 950 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 ADCK1Q86TW2 530 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 ZBTB46Q86UZ6 589 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 EGFL6Q8IUX8 553 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 P3H2Q8IVL5 708 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 LAS2Q8IYD9 372 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 OR52N2Q8NGI0 321 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 OR9A1PQ8NGU1 263 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 WFIKKN2Q8TEU8 576 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 ZNF480Q8WV37 535 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 MYDGFQ969H8 173 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 UBE2E3Q969T4 207 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 ZNF300Q96RE9 604 aaPredicted RBP13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 ANKHQ9HCJ1 492 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 ITM2CQ9NQX7 267 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 LMCD1Q9NZU5 365 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 CLDN24A6NM45 220 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 A8MVJ9 347 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 GPR37L1O60883 481 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 SH3BGRLO75368 114 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 MOSPD3O75425 235 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 TNFRSF21O75509 655 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 WBP4O75554 376 aaKnown RBP13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 NADKO95544 446 aaPredicted RBP13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 FADS2O95864 444 aaKnown RBP13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 NPPBP16860 134 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 ZNF8P17098 575 aaPredicted RBP13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 FSHRP23945 695 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 PDHA2P29803 388 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 PBLDP30039 288 aaPredicted RBP13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 KRT20P35900 424 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 GGT2P36268 569 aa13.68□□□□□ -0.22
AP003555.1-202ENST00000511013 MASP1P48740 699 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms