RNA–Protein interactions for RNA: ENST00000508910.5

POLR2J3-214, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-214ENST00000508910 PDP2Q9P2J9 529 aa10.41□□□□□ -0.74
POLR2J3-214ENST00000508910 ATXN7L1Q9ULK2 861 aaPredicted RBP10.41□□□□□ -0.74
POLR2J3-214ENST00000508910 NTN3O00634 580 aaPredicted RBP10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 FCHO1O14526 889 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 GDF9O60383 454 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 PRAMEF10O60809 474 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 SEC22BO75396 215 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 TGFB1P01137 390 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 ALDOCP09972 364 aaKnown RBP10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 THRAP10827 490 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 IDO1P14902 403 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 NCF2P19878 526 aaPredicted RBP10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 ATP4BP51164 291 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 RAP1GDS1P52306 607 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 STX1BP61266 288 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 STXBP1P61764 594 aaKnown RBP10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 EMX2Q04743 252 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 TGM3Q08188 693 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 TBL3Q12788 808 aaKnown RBP10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 ILKQ13418 452 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 SPIDRQ14159 915 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 ADPRMQ3LIE5 342 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 SNAP47Q5SQN1 464 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 TMTC4Q5T4D3 741 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 DEPDC1Q5TB30 811 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 TMEM198Q66K66 360 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 FRMPD2BQ6IN97 320 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 MTDHQ86UE4 582 aaKnown RBP10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 DNAJC22Q8N4W6 341 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 CAMKVQ8NCB2 501 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 SLC13A3Q8WWT9 602 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 KLHL6Q8WZ60 621 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 TM4SF19Q96DZ7 209 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 APIPQ96GX9 242 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 SLC41A2Q96JW4 573 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 FCRL1Q96LA6 429 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 CATSPER2Q96P56 530 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 FCRL4Q96PJ5 515 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 C1orf50Q9BV19 199 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 MRPL1Q9BYD6 325 aaKnown RBP10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 NLNQ9BYT8 704 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 SLC6A16Q9GZN6 736 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 NMUR2Q9GZQ4 415 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 OR51B5Q9H339 312 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 ZNF385DQ9H6B1 395 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 SYNPO2LQ9H987 977 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 FAM60AQ9NP50 221 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 AIG1Q9NVV5 245 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 AHSPQ9NZD4 102 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 PLCL2Q9UPR0 1127 aa10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 EIF3LQ9Y262 564 aaKnown RBP10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 RUVBL1Q9Y265 456 aaKnown RBP10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 POLR3HQ9Y535 204 aaPredicted RBP10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 EP300Q09472 2414 aaPredicted RBP10.4□□□□□ -0.74
POLR2J3-214ENST00000508910 MDC1Q14676 2089 aaKnown RBP10.4□□□□□ -0.75
POLR2J3-214ENST00000508910 ZNF292O60281 2723 aa10.4□□□□□ -0.75
POLR2J3-214ENST00000508910 ADAMTS20P59510 1910 aa10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 IGHV5-10-1A0A0J9YXX1 117 aa10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 LRIT2A6NDA9 550 aa10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 URADA6NGE7 173 aa10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 H0YGG7 62 aa10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 TXNDC9O14530 226 aa10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 CASC3O15234 703 aaKnown RBP10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 SLC22A2O15244 555 aa10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 ZSCAN9O15535 394 aaPredicted RBP10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 P2RX6O15547 441 aa10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 SRPX2O60687 465 aaPredicted RBP10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 SH3BGRLO75368 114 aa10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 RFPL3O75679 317 aa10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 MYO1DO94832 1006 aa10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 TBX6O95947 436 aaPredicted RBP10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 STATHP02808 62 aa10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 MSL3P1P0C860 447 aa10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 PCSK2P16519 638 aa10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 NELFEP18615 380 aaKnown RBP10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 TIA1P31483 386 aaKnown RBP eCLIP10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 HNRNPH1P31943 449 aaKnown RBP10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 GABRA4P48169 554 aa10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 MRPL19P49406 292 aaKnown RBP10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 SEPHS1P49903 392 aa10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 ARFIP1P53367 373 aa10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 LIMK1P53667 647 aa10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 ARF3P61204 181 aaPredicted RBP10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 NHLH1Q02575 133 aa10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 HYAL2Q12891 473 aa10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 TRA2AQ13595 282 aaKnown RBP eCLIP10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 SQLEQ14534 574 aa10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 KIAA0040Q15053 153 aa10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 GSTA3Q16772 222 aa10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 DEFB110Q30KQ9 67 aa10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 RFTN2Q52LD8 501 aaPredicted RBP10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 TOR1AIP1Q5JTV8 583 aa10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 MANEAQ5SRI9 462 aa10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 GALNT18Q6P9A2 607 aa10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 PAGE2Q7Z2X7 111 aa10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 TMPRSS9Q7Z410 1059 aa10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 COMMD6Q7Z4G1 85 aa10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 CLNKQ7Z7G1 428 aa10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 PIP4P1Q86T03 277 aa10.39□□□□□ -0.75
POLR2J3-214ENST00000508910 MCATQ8IVS2 390 aaKnown RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms