RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 FSCN3Q9NQT6 498 aa5.32□□□□□ -1.56
HMGB1P44-201ENST00000508597 CPNE7Q9UBL6 633 aa5.32□□□□□ -1.56
HMGB1P44-201ENST00000508597 TBC1D29Q9UFV1 150 aa5.32□□□□□ -1.56
HMGB1P44-201ENST00000508597 TLK1Q9UKI8 766 aa5.32□□□□□ -1.56
HMGB1P44-201ENST00000508597 PADI4Q9UM07 663 aa5.32□□□□□ -1.56
HMGB1P44-201ENST00000508597 CDYLQ9Y232 598 aa5.32□□□□□ -1.56
HMGB1P44-201ENST00000508597 DNAJC16Q9Y2G8 782 aa5.32□□□□□ -1.56
HMGB1P44-201ENST00000508597 MED16Q9Y2X0 877 aa5.32□□□□□ -1.56
HMGB1P44-201ENST00000508597 ACOT9Q9Y305 439 aa5.32□□□□□ -1.56
HMGB1P44-201ENST00000508597 PCDHGA1Q9Y5H4 931 aa5.32□□□□□ -1.56
HMGB1P44-201ENST00000508597 PCYT1BQ9Y5K3 369 aaPredicted RBP5.32□□□□□ -1.56
HMGB1P44-201ENST00000508597 SPTBN4Q9H254 2564 aa5.32□□□□□ -1.56
HMGB1P44-201ENST00000508597 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 PABPN1LA6NDY0 278 aaKnown RBP5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 LILRA5A6NI73 299 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 RHPN2P1A8MT19 583 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 IQCF5A8MTL0 148 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 B4DGG1 531 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 TMX2-CTNND1H3BSU7 103 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 GFYI3L273 518 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 FFAR2O15552 330 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 SNX2O60749 519 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 CBFA2T3O75081 653 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 PSIP1O75475 530 aaKnown RBP5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 GSTA1P08263 222 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 HIST1H2AGP0C0S8 130 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 MTHFD1P11586 935 aaKnown RBP5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 CEACAM1P13688 526 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 BRAFP15056 766 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 H2AFXP16104 143 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 ZNF37AP17032 561 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 ITGB6P18564 788 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 HIST1H2ADP20671 130 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 CYP2A7P20853 494 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 TYK2P29597 1187 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 PDHA2P29803 388 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 PBLDP30039 288 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 MAGEA12P43365 314 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 CSRP3P50461 194 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 CDKN2DP55273 166 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 AP1S2P56377 157 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 CDKL1Q00532 357 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 TIAL1Q01085 375 aaKnown RBP eCLIP5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 E2F1Q01094 437 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 HHEXQ03014 270 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 KRT33BQ14525 404 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 NR1D2Q14995 579 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 ARHGAP19Q14CB8 494 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 CLCA4Q14CN2 919 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 RPE65Q16518 533 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 FAM83EQ2M2I3 478 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 DEFB133Q30KQ1 61 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 GFOD2Q3B7J2 385 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 MINDY4Q4G0A6 757 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 CDKL4Q5MAI5 379 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 RBM20Q5T481 1227 aaKnown RBP5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 KCTD16Q68DU8 428 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 KLC3Q6P597 504 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 CYHR1Q6ZMK1 362 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 FAM83HQ6ZRV2 1179 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 RAPH1Q70E73 1250 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 ADAMTSL2Q86TH1 951 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 TBC1D1Q86TI0 1168 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 GATAD2AQ86YP4 633 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 RASGRP3Q8IV61 690 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 DCUN1D3Q8IWE4 304 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 GPR135Q8IZ08 494 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 ARL14Q8N4G2 192 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 EID2Q8N6I1 236 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 PNPLA1Q8N8W4 532 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 SIDT2Q8NBJ9 832 aaKnown RBP5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 GLB1L3Q8NCI6 653 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 ACVR1CQ8NER5 493 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 OR5K2Q8NHB8 316 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 RHEBL1Q8TAI7 183 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 LKAAEAR1Q8TD35 194 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 MCOLN3Q8TDD5 553 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 SLC37A2Q8TED4 501 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 SETD7Q8WTS6 366 aaKnown RBP5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 ATL1Q8WXF7 558 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 TFGQ92734 400 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 CNDP2Q96KP4 475 aaKnown RBP5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 UBXN10Q96LJ8 280 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 APOLD1Q96LR9 279 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 C12orf66Q96MD2 445 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 TSNARE1Q96NA8 513 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 C8orf49Q96NF6 230 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 RUFY1Q96T51 708 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 NDNQ99608 321 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 H2AFJQ9BTM1 129 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 DERL2Q9GZP9 239 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 WWP1Q9H0M0 922 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 STMN4Q9H169 189 aaPredicted RBP5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 TFB2MQ9H5Q4 396 aaKnown RBP5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 KIR3DX1Q9H7L2 352 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 RDH14Q9HBH5 336 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 NMRAL1Q9HBL8 299 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 SLC40A1Q9NP59 571 aa5.31□□□□□ -1.56
HMGB1P44-201ENST00000508597 PRDM8Q9NQV8 689 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms