RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 C8orf89P0DMQ9 161 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 SAT1P21673 171 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 AHRP35869 848 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 TSFMP43897 325 aaKnown RBP8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 XCR1P46094 333 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 SLC6A12P48065 614 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 HNMTP50135 292 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 EEF1A2Q05639 463 aaKnown RBP8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 HYAL2Q12891 473 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 MRPL49Q13405 166 aaKnown RBP8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 CSHL1Q14406 222 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 HERC3Q15034 1050 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 TRADDQ15628 312 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 TSNQ15631 228 aaKnown RBP8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 ZKSCAN8Q15776 578 aaPredicted RBP8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 B3GNTL1Q67FW5 361 aaPredicted RBP8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 ZDHHC24Q6UX98 284 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 CAPN12Q6ZSI9 719 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 CTAGE6Q86UF2 777 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 THOC6Q86W42 341 aaKnown RBP8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 CISD2Q8N5K1 135 aaKnown RBP8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 ANKRD53Q8N9V6 530 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 ZCCHC10Q8TBK6 192 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 FBXO25Q8TCJ0 367 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 BRIX1Q8TDN6 353 aaKnown RBP8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 SLC5A11Q8WWX8 675 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 CDKL2Q92772 493 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 RHBDF1Q96CC6 855 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 PSMG3-AS1Q96PY0 264 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 OR1F2PQ96R84 312 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 UCN2Q96RP3 112 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 CYTH2Q99418 400 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 RBBP8Q99708 897 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 CPNE1Q99829 537 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 TUBB6Q9BUF5 446 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 SLC29A3Q9BZD2 475 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 EPS8L2Q9H6S3 715 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 CAB39LQ9H9S4 337 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 ANKHQ9HCJ1 492 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 GPAMQ9HCL2 828 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 LANCL2Q9NS86 450 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 HCN3Q9P1Z3 774 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 CTNNAL1Q9UBT7 734 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 ZFP69BQ9UJL9 534 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 SLC22A14Q9Y267 594 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 NAALAD2Q9Y3Q0 740 aa8.57□□□□□ -1.04
PDLIM5-209ENST00000506632 ICE1Q9Y2F5 2266 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 OR2W5A6NFC9 320 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 C3orf80F5H4A9 247 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 NDUFS4O43181 175 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 SMIM10L1P0DMW3 83 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 ITGAMP11215 1152 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 ALOX12P18054 663 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 IL10P22301 178 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 GGT5P36269 586 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 GP5P40197 560 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 PLTPP55058 493 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 RHAGQ02094 409 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 GUCY2DQ02846 1103 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 CAV1Q03135 178 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 ZNF169Q14929 603 aaPredicted RBP8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 TLR1Q15399 786 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 TGFBIQ15582 683 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 CDKL4Q5MAI5 379 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 RPUSD3Q6P087 351 aaKnown RBP8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 NXPE4Q6UWF7 544 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 C3orf62Q6ZUJ4 267 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 LANCL3Q6ZV70 420 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 CPEB2Q7Z5Q1 589 aaKnown RBP8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 ANKRD37Q7Z713 158 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 TMPRSS11BQ86T26 416 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 TBC1D19Q8N5T2 526 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 AMER2Q8N7J2 671 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 PLPP5Q8NEB5 264 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 OR5T3Q8NGG3 340 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 DNAJB14Q8TBM8 379 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 UTP15Q8TED0 518 aaKnown RBP8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 HAS2Q92819 552 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 TSPAN17Q96FV3 270 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 SMIM10Q96HG1 83 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 UBXN10Q96LJ8 280 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 TSNARE1Q96NA8 513 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 TMEM79Q9BSE2 394 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 SLC6A16Q9GZN6 736 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 AICDAQ9GZX7 198 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 RAB17Q9H0T7 212 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 LRRC4CQ9HCJ2 640 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 COPG2Q9UBF2 871 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 UTP11Q9Y3A2 253 aaKnown RBP8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 COPG1Q9Y678 874 aaKnown RBP8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 KCNE2Q9Y6J6 123 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 SCN2AQ99250 2005 aa8.56□□□□□ -1.04
PDLIM5-209ENST00000506632 IGHV3-20A0A0C4DH32 117 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 ZNF860A6NHJ4 632 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 MAGEB17A8MXT2 336 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 C4orf51C9J302 202 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 E2F3O00716 465 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 TAPBPO15533 448 aa8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 PHGDHO43175 533 aaKnown RBP8.55□□□□□ -1.04
PDLIM5-209ENST00000506632 CHST10O43529 356 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms