RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 HIST1H2ADP20671 130 aa15.11■□□□□ 0.01
PDLIM7-213ENST00000505074 HRH2P25021 359 aa15.11■□□□□ 0.01
PDLIM7-213ENST00000505074 GRK3P35626 688 aa15.11■□□□□ 0.01
PDLIM7-213ENST00000505074 FNTAP49354 379 aa15.11■□□□□ 0.01
PDLIM7-213ENST00000505074 RELAQ04206 551 aa15.11■□□□□ 0.01
PDLIM7-213ENST00000505074 ZNF33BQ06732 778 aa15.11■□□□□ 0.01
PDLIM7-213ENST00000505074 NAE1Q13564 534 aa15.11■□□□□ 0.01
PDLIM7-213ENST00000505074 PCOLCEQ15113 449 aa15.11■□□□□ 0.01
PDLIM7-213ENST00000505074 PRSS41Q7RTY9 318 aa15.11■□□□□ 0.01
PDLIM7-213ENST00000505074 LRRC56Q8IYG6 542 aaPredicted RBP15.11■□□□□ 0.01
PDLIM7-213ENST00000505074 SLC35F6Q8N357 371 aa15.11■□□□□ 0.01
PDLIM7-213ENST00000505074 PHF10Q8WUB8 498 aaKnown RBP15.11■□□□□ 0.01
PDLIM7-213ENST00000505074 LINGO1Q96FE5 620 aa15.11■□□□□ 0.01
PDLIM7-213ENST00000505074 HIST1H2AHQ96KK5 128 aa15.11■□□□□ 0.01
PDLIM7-213ENST00000505074 CCDC138Q96M89 665 aa15.11■□□□□ 0.01
PDLIM7-213ENST00000505074 GPR137Q96N19 417 aa15.11■□□□□ 0.01
PDLIM7-213ENST00000505074 OSBPL9Q96SU4 736 aa15.11■□□□□ 0.01
PDLIM7-213ENST00000505074 HIST1H2AJQ99878 128 aa15.11■□□□□ 0.01
PDLIM7-213ENST00000505074 H2AFJQ9BTM1 129 aa15.11■□□□□ 0.01
PDLIM7-213ENST00000505074 TUBB6Q9BUF5 446 aa15.11■□□□□ 0.01
PDLIM7-213ENST00000505074 ZNF700Q9H0M5 742 aa15.11■□□□□ 0.01
PDLIM7-213ENST00000505074 PCBD2Q9H0N5 130 aa15.11■□□□□ 0.01
PDLIM7-213ENST00000505074 ANKHQ9HCJ1 492 aa15.11■□□□□ 0.01
PDLIM7-213ENST00000505074 TNFRSF10DQ9UBN6 386 aa15.11■□□□□ 0.01
PDLIM7-213ENST00000505074 C19orf25Q9UFG5 118 aaPredicted RBP15.11■□□□□ 0.01
PDLIM7-213ENST00000505074 TEKT2Q9UIF3 430 aa15.11■□□□□ 0.01
PDLIM7-213ENST00000505074 PDE10AQ9Y233 779 aa15.11■□□□□ 0.01
PDLIM7-213ENST00000505074 SCN3AQ9NY46 2000 aa15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 IGHV3-20A0A0C4DH32 117 aa15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 A8MUI8 341 aa15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 FOXO6A8MYZ6 492 aa15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 FAM227AF5H4B4 570 aa15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 H0YIG0 161 aa15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 SGK494L7N484 410 aa15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 WISP2O76076 250 aa15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 NSA2O95478 260 aaKnown RBP15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 CDH1P12830 882 aa15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 DNAJA1P31689 397 aaKnown RBP15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 XCR1P46094 333 aa15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 IST1P53990 364 aa15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 DHX9Q08211 1270 aaKnown RBP15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 SP140Q13342 867 aa15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 PDAP1Q13442 181 aaKnown RBP15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 BTBD16Q32M84 506 aa15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 BBS9Q3SYG4 887 aa15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 AGTRAPQ6RW13 159 aa15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 LANCL3Q6ZV70 420 aa15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 NCCRP1Q6ZVX7 275 aaPredicted RBP15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 VN1R4Q7Z5H5 301 aa15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 TMEM200AQ86VY9 491 aa15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 ARHGEF39Q8N4T4 335 aa15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 CAMKVQ8NCB2 501 aa15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 C2CD4AQ8NCU7 369 aaPredicted RBP15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 OR51Q1Q8NH59 317 aa15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 SDCCAG3Q96C92 435 aa15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 FOXC2Q99958 501 aa15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 RBCK1Q9BYM8 510 aa15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 VN1R1Q9GZP7 353 aa15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 PARVBQ9HBI1 364 aa15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 COQ3Q9NZJ6 369 aa15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 SH2B3Q9UQQ2 575 aa15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 DNHD1Q96M86 4753 aa15.1■□□□□ 0.01
PDLIM7-213ENST00000505074 PRRC2AP48634 2157 aaKnown RBP15.09■□□□□ 0.01
PDLIM7-213ENST00000505074 LOC102723996A0A087X1L8 192 aa15.09■□□□□ 0.01
PDLIM7-213ENST00000505074 TMEM200CA6NKL6 621 aa15.09■□□□□ 0.01
PDLIM7-213ENST00000505074 RDH16O75452 317 aa15.09■□□□□ 0.01
PDLIM7-213ENST00000505074 TTC4O95801 387 aa15.09■□□□□ 0.01
PDLIM7-213ENST00000505074 SERPIND1P05546 499 aa15.09■□□□□ 0.01
PDLIM7-213ENST00000505074 SLC35G6P0C7Q6 338 aa15.09■□□□□ 0.01
PDLIM7-213ENST00000505074 CCND1P24385 295 aa15.09■□□□□ 0.01
PDLIM7-213ENST00000505074 BCL6P41182 706 aa15.09■□□□□ 0.01
PDLIM7-213ENST00000505074 SNRPNP63162 240 aaKnown RBP15.09■□□□□ 0.01
PDLIM7-213ENST00000505074 ALDH6A1Q02252 535 aaKnown RBP15.09■□□□□ 0.01
PDLIM7-213ENST00000505074 ZNF766Q5HY98 468 aa15.09■□□□□ 0.01
PDLIM7-213ENST00000505074 SPANXN3Q5MJ09 141 aa15.09■□□□□ 0.01
PDLIM7-213ENST00000505074 RBM20Q5T481 1227 aaKnown RBP15.09■□□□□ 0.01
PDLIM7-213ENST00000505074 RNASEH2BQ5TBB1 312 aaKnown RBP15.09■□□□□ 0.01
PDLIM7-213ENST00000505074 PAQR3Q6TCH7 311 aa15.09■□□□□ 0.01
PDLIM7-213ENST00000505074 TMEM205Q6UW68 189 aa15.09■□□□□ 0.01
PDLIM7-213ENST00000505074 CPEB2Q7Z5Q1 589 aaKnown RBP15.09■□□□□ 0.01
PDLIM7-213ENST00000505074 ASPGQ86U10 573 aa15.09■□□□□ 0.01
PDLIM7-213ENST00000505074 EID3Q8N140 333 aa15.09■□□□□ 0.01
PDLIM7-213ENST00000505074 AMER2Q8N7J2 671 aa15.09■□□□□ 0.01
PDLIM7-213ENST00000505074 GPATCH11Q8N954 259 aa15.09■□□□□ 0.01
PDLIM7-213ENST00000505074 ACTRT1Q8TDG2 376 aa15.09■□□□□ 0.01
PDLIM7-213ENST00000505074 SLC13A3Q8WWT9 602 aa15.09■□□□□ 0.01
PDLIM7-213ENST00000505074 THAP11Q96EK4 314 aa15.09■□□□□ 0.01
PDLIM7-213ENST00000505074 CFAP36Q96G28 342 aa15.09■□□□□ 0.01
PDLIM7-213ENST00000505074 CXXC4Q9H2H0 198 aa15.09■□□□□ 0.01
PDLIM7-213ENST00000505074 ARL15Q9NXU5 204 aa15.09■□□□□ 0.01
PDLIM7-213ENST00000505074 STMN3Q9NZ72 180 aa15.09■□□□□ 0.01
PDLIM7-213ENST00000505074 A0A1W2PQ72 361 aa15.08■□□□□ 0
PDLIM7-213ENST00000505074 ZNF860A6NHJ4 632 aa15.08■□□□□ 0
PDLIM7-213ENST00000505074 DNALI1O14645 258 aaPredicted RBP15.08■□□□□ 0
PDLIM7-213ENST00000505074 TTI1O43156 1089 aa15.08■□□□□ 0
PDLIM7-213ENST00000505074 CDC123O75794 336 aaPredicted RBP15.08■□□□□ 0
PDLIM7-213ENST00000505074 ABOP16442 354 aa15.08■□□□□ 0
PDLIM7-213ENST00000505074 EFNA3P52797 238 aa15.08■□□□□ 0
PDLIM7-213ENST00000505074 CDKN2DP55273 166 aa15.08■□□□□ 0
PDLIM7-213ENST00000505074 MEF2AQ02078 507 aaPredicted RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms