RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 ZCCHC14Q8WYQ9 949 aaKnown RBP11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 ATP6V1E2Q96A05 226 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 MAGEB10Q96LZ2 347 aaPredicted RBP11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 C10orf90Q96M02 699 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 SH3GL2Q99962 352 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 GSTO2Q9H4Y5 243 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 SEMA4BQ9NPR2 832 aaPredicted RBP11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 TXLNGQ9NUQ3 528 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 DHCR7Q9UBM7 475 aaKnown RBP11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 ADGRE2Q9UHX3 823 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 STK38LQ9Y2H1 464 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 RNF11Q9Y3C5 154 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 TSC22D4Q9Y3Q8 395 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 PCDHGA11Q9Y5H2 935 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 DOCK10Q96BY6 2186 aa11.34□□□□□ -0.59
PDLIM5-208ENST00000504489 ASPMQ8IZT6 3477 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 MED13Q9UHV7 2174 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 A0A1B0GX78 115 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 ANKDD1BA6NHY2 528 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 H0YIV9 168 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 TAF4O00268 1085 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 CLEC3AO75596 197 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 MED26O95402 600 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 MLYCDO95822 493 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 SERPINB1P30740 379 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 ALDH3A1P30838 453 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 STAT5AP42229 794 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 MAGOHP61326 146 aaKnown RBP11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 RGS1Q08116 209 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 CLN3Q13286 438 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 MPP2Q14168 576 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 TGIF1Q15583 401 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 NDUFA9Q16795 377 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 GGTA1PQ4G0N0 100 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 TMEM214Q6NUQ4 689 aaKnown RBP11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 FRMD7Q6ZUT3 714 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 TTLL10Q6ZVT0 673 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 MILR1Q7Z6M3 343 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 CCNYL1Q8N7R7 359 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 OR7G3Q8NG95 312 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 KCNE4Q8WWG9 221 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 ARL8AQ96BM9 186 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 MOCOSQ96EN8 888 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 RNF31Q96EP0 1072 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 MVB12AQ96EY5 273 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 GBP5Q96PP8 586 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 ZNF382Q96SR6 550 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 GATA5Q9BWX5 397 aaPredicted RBP11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 FAM117AQ9C073 453 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 SLC6A16Q9GZN6 736 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 DRC3Q9H069 523 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 AKIRIN1Q9H9L7 192 aaPredicted RBP11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 KCNK9Q9NPC2 374 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 LHX9Q9NQ69 397 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 CDC14AQ9UNH5 594 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 SLC22A7Q9Y694 548 aa11.33□□□□□ -0.6
PDLIM5-208ENST00000504489 URADA6NGE7 173 aa11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 H3BQF6 201 aa11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 PPP6CO00743 305 aa11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 RRP8O43159 456 aaKnown RBP11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 NDUFS4O43181 175 aa11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 SASH3O75995 380 aa11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 STATHP02808 62 aa11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 SERPIND1P05546 499 aa11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 BPGMP07738 259 aa11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 DHRS4L1P0CG22 281 aa11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 PIM1P11309 404 aaPredicted RBP11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 TSPAN8P19075 237 aa11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 AGXTP21549 392 aa11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 ALAS2P22557 587 aa11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 PIK3CBP42338 1070 aa11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 PKNOX1P55347 436 aa11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 DCDP81605 110 aaKnown RBP11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 HYAL2Q12891 473 aa11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 LCP2Q13094 533 aa11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 RBBP7Q16576 425 aa11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 CPSF6Q16630 551 aaKnown RBP eCLIP11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 NKAIN1Q4KMZ8 207 aa11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 CFAP157Q5JU67 520 aa11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 C10orf62Q5T681 223 aaPredicted RBP11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 C1orf189Q5VU69 101 aa11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 LETMD1Q6P1Q0 360 aa11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 PRMT9Q6P2P2 845 aa11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 BLOC1S3Q6QNY0 202 aa11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 VN1R5Q7Z5H4 357 aa11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 MYLK4Q86YV6 388 aaPredicted RBP11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 IL22RA1Q8N6P7 574 aa11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 KCT2Q8NC54 265 aa11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 OR4F6Q8NGB9 312 aa11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 TRPC4APQ8TEL6 797 aa11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 ZNF473Q8WTR7 871 aaKnown RBP11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 SREK1Q8WXA9 508 aaKnown RBP11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 MR1Q95460 341 aa11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 REPS1Q96D71 796 aa11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 CNDP1Q96KN2 507 aa11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 ATP6V1G3Q96LB4 118 aa11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 CDK15Q96Q40 435 aa11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 MACROD1Q9BQ69 325 aa11.32□□□□□ -0.6
PDLIM5-208ENST00000504489 C17orf62Q9BQA9 187 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms