RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 PCNAP12004 261 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 IL1RNP18510 177 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 IMPDH1P20839 514 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 AGXTP21549 392 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 CCNG1P51959 295 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 RPS18P62269 152 aaKnown RBP15.68■□□□□ 0.1
SCLT1-205ENST00000503401 CLCQ05315 142 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 DNASE1L3Q13609 305 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 E2F2Q14209 437 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 CPSF6Q16630 551 aaKnown RBP eCLIP15.68■□□□□ 0.1
SCLT1-205ENST00000503401 NKAIN1Q4KMZ8 207 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 PAGE2BQ5JRK9 111 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 MLIPQ5VWP3 458 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 TMEM214Q6NUQ4 689 aaKnown RBP15.68■□□□□ 0.1
SCLT1-205ENST00000503401 CROCCP2Q86T23 111 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 C10orf107Q8IVU9 208 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 RNF175Q8N4F7 328 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 CCNYL1Q8N7R7 359 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 KIAA1143Q96AT1 154 aaPredicted RBP15.68■□□□□ 0.1
SCLT1-205ENST00000503401 CRELD1Q96HD1 420 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 C1QTNF3Q9BXJ4 246 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 AICDAQ9GZX7 198 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 DRC3Q9H069 523 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 KLHL31Q9H511 634 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 PRM3Q9NNZ6 103 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 FOXS1O43638 330 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 CAPN1P07384 714 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 RGS1Q08116 209 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 PCDH1Q08174 1060 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 HYAL2Q12891 473 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 TRAF3Q13114 568 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 LAPTM5Q13571 262 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 PWP1Q13610 501 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 PCLAFQ15004 111 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 HIST2H2ACQ16777 129 aaPredicted RBP15.68■□□□□ 0.1
SCLT1-205ENST00000503401 GARNL3Q5VVW2 1013 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 HIST2H2AA3Q6FI13 130 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 GRHL2Q6ISB3 625 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 MED27Q6P2C8 311 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 TMEM151BQ8IW70 566 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 SHISA5Q8N114 240 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 ENDOVQ8N8Q3 282 aaKnown RBP15.68■□□□□ 0.1
SCLT1-205ENST00000503401 TRPV3Q8NET8 790 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 OR9A4Q8NGU2 314 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 RDH11Q8TC12 318 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 NT5CQ8TCD5 201 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 L3HYPDHQ96EM0 354 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 MMABQ96EY8 250 aaPredicted RBP15.68■□□□□ 0.1
SCLT1-205ENST00000503401 DPH2Q9BQC3 489 aaPredicted RBP15.68■□□□□ 0.1
SCLT1-205ENST00000503401 MECRQ9BV79 373 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 NT5DC2Q9H857 520 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 TMBIM4Q9HC24 238 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 OXSMQ9NWU1 459 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 IFT80Q9P2H3 777 aaPredicted RBP15.68■□□□□ 0.1
SCLT1-205ENST00000503401 SSUH2Q9Y2M2 353 aa15.68■□□□□ 0.1
SCLT1-205ENST00000503401 ANKDD1BA6NHY2 528 aa15.67■□□□□ 0.1
SCLT1-205ENST00000503401 C4orf51C9J302 202 aa15.67■□□□□ 0.1
SCLT1-205ENST00000503401 SH3BGRLO75368 114 aa15.67■□□□□ 0.1
SCLT1-205ENST00000503401 CLDN9O95484 217 aa15.67■□□□□ 0.1
SCLT1-205ENST00000503401 TBX6O95947 436 aaPredicted RBP15.67■□□□□ 0.1
SCLT1-205ENST00000503401 ZNF888P0CJ79 500 aaPredicted RBP15.67■□□□□ 0.1
SCLT1-205ENST00000503401 HNRNPH1P31943 449 aaKnown RBP15.67■□□□□ 0.1
SCLT1-205ENST00000503401 CCR10P46092 362 aa15.67■□□□□ 0.1
SCLT1-205ENST00000503401 NAGLUP54802 743 aa15.67■□□□□ 0.1
SCLT1-205ENST00000503401 EMP3P54852 163 aa15.67■□□□□ 0.1
SCLT1-205ENST00000503401 DDX39BQ13838 428 aaKnown RBP15.67■□□□□ 0.1
SCLT1-205ENST00000503401 NDUFA9Q16795 377 aa15.67■□□□□ 0.1
SCLT1-205ENST00000503401 TOR1AIP1Q5JTV8 583 aa15.67■□□□□ 0.1
SCLT1-205ENST00000503401 ARHGAP40Q5TG30 622 aa15.67■□□□□ 0.1
SCLT1-205ENST00000503401 BROXQ5VW32 411 aa15.67■□□□□ 0.1
SCLT1-205ENST00000503401 LIPJQ5W064 366 aa15.67■□□□□ 0.1
SCLT1-205ENST00000503401 LETMD1Q6P1Q0 360 aa15.67■□□□□ 0.1
SCLT1-205ENST00000503401 C19orf48Q6RUI8 117 aa15.67■□□□□ 0.1
SCLT1-205ENST00000503401 COX15Q7KZN9 410 aa15.67■□□□□ 0.1
SCLT1-205ENST00000503401 PDSS2Q86YH6 399 aa15.67■□□□□ 0.1
SCLT1-205ENST00000503401 OR7G3Q8NG95 312 aa15.67■□□□□ 0.1
SCLT1-205ENST00000503401 OR4F6Q8NGB9 312 aa15.67■□□□□ 0.1
SCLT1-205ENST00000503401 COL26A1Q96A83 441 aa15.67■□□□□ 0.1
SCLT1-205ENST00000503401 CCDC126Q96EE4 140 aa15.67■□□□□ 0.1
SCLT1-205ENST00000503401 PITHD1Q9GZP4 211 aaPredicted RBP15.67■□□□□ 0.1
SCLT1-205ENST00000503401 ZNF225Q9UK10 706 aa15.67■□□□□ 0.1
SCLT1-205ENST00000503401 UQCRHLA0A096LP55 91 aa15.66■□□□□ 0.1
SCLT1-205ENST00000503401 ZNF860A6NHJ4 632 aa15.66■□□□□ 0.1
SCLT1-205ENST00000503401 GOLGA6L10A6NI86 522 aa15.66■□□□□ 0.1
SCLT1-205ENST00000503401 C9J4A7 227 aa15.66■□□□□ 0.1
SCLT1-205ENST00000503401 SGK494L7N484 410 aa15.66■□□□□ 0.1
SCLT1-205ENST00000503401 CNOT3O75175 753 aaKnown RBP15.66■□□□□ 0.1
SCLT1-205ENST00000503401 UQCRHP07919 91 aa15.66■□□□□ 0.1
SCLT1-205ENST00000503401 SERPINA6P08185 405 aa15.66■□□□□ 0.1
SCLT1-205ENST00000503401 RAB8AP61006 207 aa15.66■□□□□ 0.1
SCLT1-205ENST00000503401 MAT1AQ00266 395 aaKnown RBP15.66■□□□□ 0.1
SCLT1-205ENST00000503401 FAM53BQ14153 422 aa15.66■□□□□ 0.1
SCLT1-205ENST00000503401 NCF4Q15080 339 aa15.66■□□□□ 0.1
SCLT1-205ENST00000503401 SYT16Q17RD7 645 aa15.66■□□□□ 0.1
SCLT1-205ENST00000503401 CCDC81Q6ZN84 652 aa15.66■□□□□ 0.1
SCLT1-205ENST00000503401 HDXQ7Z353 690 aa15.66■□□□□ 0.1
SCLT1-205ENST00000503401 MILR1Q7Z6M3 343 aa15.66■□□□□ 0.1
SCLT1-205ENST00000503401 LAS2Q8IYD9 372 aa15.66■□□□□ 0.1
SCLT1-205ENST00000503401 L3MBTL4Q8NA19 623 aa15.66■□□□□ 0.1
SCLT1-205ENST00000503401 TTLQ8NG68 377 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms