RNA–Protein interactions for RNA: ENST00000502639.1

CDC42SE2-204, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-204ENST00000502639 TDHQ8IZJ6 230 aa3.56□□□□□ -1.84
CDC42SE2-204ENST00000502639 OR8H3Q8N146 312 aa3.56□□□□□ -1.84
CDC42SE2-204ENST00000502639 PRSS35Q8N3Z0 413 aa3.56□□□□□ -1.84
CDC42SE2-204ENST00000502639 AMER3Q8N944 861 aa3.56□□□□□ -1.84
CDC42SE2-204ENST00000502639 NUP37Q8NFH4 326 aa3.56□□□□□ -1.84
CDC42SE2-204ENST00000502639 AK8Q96MA6 479 aa3.56□□□□□ -1.84
CDC42SE2-204ENST00000502639 PRICKLE1Q96MT3 831 aaPredicted RBP3.56□□□□□ -1.84
CDC42SE2-204ENST00000502639 TRIM15Q9C019 465 aa3.56□□□□□ -1.84
CDC42SE2-204ENST00000502639 UBQLN3Q9H347 655 aa3.56□□□□□ -1.84
CDC42SE2-204ENST00000502639 C10orf88Q9H8K7 445 aa3.56□□□□□ -1.84
CDC42SE2-204ENST00000502639 SH3GLB2Q9NR46 395 aa3.56□□□□□ -1.84
CDC42SE2-204ENST00000502639 MRGBPQ9NV56 204 aa3.56□□□□□ -1.84
CDC42SE2-204ENST00000502639 PAK5Q9P286 719 aa3.56□□□□□ -1.84
CDC42SE2-204ENST00000502639 THAP10Q9P2Z0 257 aaPredicted RBP3.56□□□□□ -1.84
CDC42SE2-204ENST00000502639 NOCTQ9UK39 431 aaKnown RBP3.56□□□□□ -1.84
CDC42SE2-204ENST00000502639 A0A0B4J203 849 aa3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 A0A0J9YWU9 116 aa3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 A8MVM7 634 aa3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 E5RGE8 158 aa3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 E9PQ18 207 aa3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 NPIPA3F8WFD2 350 aa3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 WDR46O15213 610 aaKnown RBP3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 IDH3BO43837 385 aa3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 LRCH4O75427 683 aa3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 MOCS2O96007 188 aaPredicted RBP3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 C9P02748 559 aa3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 MT-ND2P03891 347 aa3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 RLN1P04808 185 aa3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 SP9P0CG40 484 aa3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 GOT1P17174 413 aa3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 AADACP22760 399 aa3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 PDHA2P29803 388 aa3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 KRTAP10-5P60370 271 aa3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 HECTD3Q5T447 861 aa3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 FBXL22Q6P050 247 aa3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 PET117Q6UWS5 81 aa3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 MEX3DQ86XN8 651 aaKnown RBP3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 DZIP1Q86YF9 867 aaKnown RBP3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 NHLRC2Q8NBF2 726 aa3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 Q8NBF4 154 aa3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 OR5T2Q8NGG2 359 aa3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 CD99L2Q8TCZ2 262 aa3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 OMA1Q96E52 524 aa3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 ATXN7L3BQ96GX2 97 aa3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 PARK7Q99497 189 aaKnown RBP3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 CITED2Q99967 270 aaPredicted RBP3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 ADPGKQ9BRR6 497 aa3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 NUDT4Q9NZJ9 180 aa3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 NSG2Q9Y328 171 aa3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 WIPI2Q9Y4P8 454 aa3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 SELENOKQ9Y6D0 94 aa3.55□□□□□ -1.84
CDC42SE2-204ENST00000502639 TDRD15B5MCY1 1934 aaKnown RBP3.54□□□□□ -1.84
CDC42SE2-204ENST00000502639 SHISA7A6NL88 538 aa3.54□□□□□ -1.84
CDC42SE2-204ENST00000502639 H0YIG0 161 aa3.54□□□□□ -1.84
CDC42SE2-204ENST00000502639 IFIT3O14879 490 aaKnown RBP3.54□□□□□ -1.84
CDC42SE2-204ENST00000502639 SURF4O15260 269 aa3.54□□□□□ -1.84
CDC42SE2-204ENST00000502639 NXPH4O95158 308 aa3.54□□□□□ -1.84
CDC42SE2-204ENST00000502639 SUPT20HL2P0C7V6 817 aa3.54□□□□□ -1.84
CDC42SE2-204ENST00000502639 SCN1BQ07699 218 aa3.54□□□□□ -1.84
CDC42SE2-204ENST00000502639 PTK6Q13882 451 aa3.54□□□□□ -1.84
CDC42SE2-204ENST00000502639 FASTKD3Q14CZ7 662 aaKnown RBP3.54□□□□□ -1.84
CDC42SE2-204ENST00000502639 TWISTNBQ3B726 338 aaPredicted RBP3.54□□□□□ -1.84
CDC42SE2-204ENST00000502639 ALDH1L2Q3SY69 923 aa3.54□□□□□ -1.84
CDC42SE2-204ENST00000502639 FAM106AQ4KMX7 169 aa3.54□□□□□ -1.84
CDC42SE2-204ENST00000502639 C2CD6Q53TS8 623 aa3.54□□□□□ -1.84
CDC42SE2-204ENST00000502639 SPOUT1Q5T280 376 aaKnown RBP3.54□□□□□ -1.84
CDC42SE2-204ENST00000502639 ATP1A1-AS1Q5TC04 95 aa3.54□□□□□ -1.84
CDC42SE2-204ENST00000502639 FAAP20Q6NZ36 180 aa3.54□□□□□ -1.84
CDC42SE2-204ENST00000502639 ZNF343Q6P1L6 599 aa3.54□□□□□ -1.84
CDC42SE2-204ENST00000502639 PODNL1Q6PEZ8 512 aa3.54□□□□□ -1.84
CDC42SE2-204ENST00000502639 GDPGP1Q6ZNW5 385 aa3.54□□□□□ -1.84
CDC42SE2-204ENST00000502639 MYPOPQ86VE0 399 aaPredicted RBP3.54□□□□□ -1.84
CDC42SE2-204ENST00000502639 SLC26A7Q8TE54 656 aa3.54□□□□□ -1.84
CDC42SE2-204ENST00000502639 CASP10Q92851 521 aa3.54□□□□□ -1.84
CDC42SE2-204ENST00000502639 SPATA17Q96L03 361 aa3.54□□□□□ -1.84
CDC42SE2-204ENST00000502639 AGAP3Q96P47 875 aa3.54□□□□□ -1.84
CDC42SE2-204ENST00000502639 TSSK2Q96PF2 358 aa3.54□□□□□ -1.84
CDC42SE2-204ENST00000502639 PRMT1Q99873 361 aaKnown RBP3.54□□□□□ -1.84
CDC42SE2-204ENST00000502639 RBM4BQ9BQ04 359 aaKnown RBP3.54□□□□□ -1.84
CDC42SE2-204ENST00000502639 GTF3C4Q9UKN8 822 aa3.54□□□□□ -1.84
CDC42SE2-204ENST00000502639 ITGA11Q9UKX5 1188 aa3.54□□□□□ -1.84
CDC42SE2-204ENST00000502639 NPHP3Q7Z494 1330 aa3.53□□□□□ -1.84
CDC42SE2-204ENST00000502639 IGHV3-20A0A0C4DH32 117 aa3.53□□□□□ -1.84
CDC42SE2-204ENST00000502639 A0A1W2PRQ8 180 aa3.53□□□□□ -1.84
CDC42SE2-204ENST00000502639 YDJCA8MPS7 323 aa3.53□□□□□ -1.84
CDC42SE2-204ENST00000502639 KPNA7A9QM74 516 aa3.53□□□□□ -1.84
CDC42SE2-204ENST00000502639 K7EQD1 137 aa3.53□□□□□ -1.84
CDC42SE2-204ENST00000502639 SLC1A7O00341 560 aa3.53□□□□□ -1.84
CDC42SE2-204ENST00000502639 CTDSPLO15194 276 aa3.53□□□□□ -1.84
CDC42SE2-204ENST00000502639 PI15O43692 258 aa3.53□□□□□ -1.84
CDC42SE2-204ENST00000502639 SRD5A2P31213 254 aa3.53□□□□□ -1.84
CDC42SE2-204ENST00000502639 TMEM50BP56557 158 aa3.53□□□□□ -1.84
CDC42SE2-204ENST00000502639 GLIPR1L2Q4G1C9 344 aa3.53□□□□□ -1.84
CDC42SE2-204ENST00000502639 TAF1BQ53T94 588 aaPredicted RBP3.53□□□□□ -1.84
CDC42SE2-204ENST00000502639 NHSL2Q5HYW2 709 aa3.53□□□□□ -1.84
CDC42SE2-204ENST00000502639 SPANXN4Q5MJ08 99 aa3.53□□□□□ -1.84
CDC42SE2-204ENST00000502639 ZNF772Q68DY9 489 aaPredicted RBP3.53□□□□□ -1.84
CDC42SE2-204ENST00000502639 TRIM65Q6PJ69 517 aa3.53□□□□□ -1.84
CDC42SE2-204ENST00000502639 SLC22A15Q8IZD6 547 aa3.53□□□□□ -1.84
CDC42SE2-204ENST00000502639 TEX26Q8N6G2 289 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms