RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 TECPR1Q7Z6L1 1165 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 CCDC190Q86UF4 302 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 FAM228AQ86W67 206 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 C1QL4Q86Z23 238 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 LAX1Q8IWV1 398 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 SLC43A2Q8N370 569 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 LNX2Q8N448 690 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 CERS5Q8N5B7 392 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 AADATQ8N5Z0 425 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 TTC9BQ8N6N2 239 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 ZNF611Q8N823 705 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 OR9A1PQ8NGU1 263 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 OR2AJ1Q8NGZ0 328 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 OR52J3Q8NH60 311 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 OR4A16Q8NH70 328 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 RP9Q8TA86 221 aaKnown RBP4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 PROKR1Q8TCW9 393 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 ATP8B4Q8TF62 1192 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 ATL1Q8WXF7 558 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 HAS1Q92839 578 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 ULK4Q96C45 1275 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 C11orf24Q96F05 449 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 PGM2Q96G03 612 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 OXNAD1Q96HP4 312 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 PRMT6Q96LA8 375 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 C8orf49Q96NF6 230 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 TAAR6Q96RI8 345 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 TUBA1CQ9BQE3 449 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 LZTS2Q9BRK4 669 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 MTG1Q9BT17 334 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 SNX25Q9H3E2 840 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 RAD21L1Q9H4I0 556 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 BICC1Q9H694 974 aaKnown RBP4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 GOLGA2P5Q9HBQ8 144 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 AGPAT5Q9NUQ2 364 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 SMPD4Q9NXE4 827 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 KLHL8Q9P2G9 620 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 OR14J1Q9UGF5 321 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 FZD1Q9UP38 647 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 ADGRA2Q96PE1 1338 aa4.11□□□□□ -1.75
HMGB1P21-201ENST00000502313 KRTAP4-8A0A0G2JLE6 195 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 A0A0U1RQF3 1178 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 TMEM221A6NGB7 291 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 SLC22A2O15244 555 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 MPPED1O15442 326 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 PSMD3O43242 534 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 LRRTM2O43300 516 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 ZNF254O75437 659 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 MBD3O95983 291 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 RALBP11234 206 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 KRT3P12035 628 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 CPA3P15088 417 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 RPS12P25398 132 aaKnown RBP4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 PIK3R1P27986 724 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 CYP2C18P33260 490 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 EPHX2P34913 555 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 ADRA1AP35348 466 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 DLSTP36957 453 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 SLC1A3P43003 542 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 OR3A1P47881 315 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 NUDT6P53370 316 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 COPB1P53618 953 aaKnown RBP4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 MAPK12P53778 367 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 PRMT2P55345 433 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 NUCB2P80303 420 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 CDK3Q00526 305 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 CFHR1Q03591 330 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 TGM3Q08188 693 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 PDIA5Q14554 519 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 ARHGEF6Q15052 776 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 STXBP2Q15833 593 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 ADPRMQ3LIE5 342 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 ANXA2RQ3ZCQ2 193 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 FAM174BQ3ZCQ3 159 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 ESCO2Q56NI9 601 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 CCDC122Q5T0U0 273 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 ARMC12Q5T9G4 340 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 TAF3Q5VWG9 929 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 NSUN5P2Q63ZY6 315 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 Q6ZWC4 215 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 USP50Q70EL3 339 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 EFL1Q7Z2Z2 1120 aaKnown RBP4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 IRF2BP2Q7Z5L9 587 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 ANKRD46Q86W74 232 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 ZC3HC1Q86WB0 502 aaKnown RBP4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 C16orf71Q8IYS4 520 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 FAM9CQ8IZT9 166 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 SLC44A3Q8N4M1 653 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 PARP16Q8N5Y8 322 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 BCORP1Q8N888 145 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 C17orf47Q8NEP4 570 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 SLC22A8Q8TCC7 542 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 NEU4Q8WWR8 484 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 RLN3Q8WXF3 142 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 TFAP2BQ92481 460 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 RASD2Q96D21 266 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 C19orf60Q96EN9 201 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 FAM84BQ96KN1 310 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 ATP6V1G3Q96LB4 118 aa4.1□□□□□ -1.75
HMGB1P21-201ENST00000502313 Q96MF0 132 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms