RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 MFSD4BQ5TF39 518 aa17.4■□□□□ 0.38
HOXD11-202ENST00000498438 RAPH1Q70E73 1250 aa17.4■□□□□ 0.38
HOXD11-202ENST00000498438 NDUFAF7Q7L592 441 aa17.4■□□□□ 0.38
HOXD11-202ENST00000498438 CTAGE6Q86UF2 777 aa17.4■□□□□ 0.38
HOXD11-202ENST00000498438 CTAGE4Q8IX94 777 aa17.4■□□□□ 0.38
HOXD11-202ENST00000498438 AFAP1L2Q8N4X5 818 aa17.4■□□□□ 0.38
HOXD11-202ENST00000498438 ANKRD53Q8N9V6 530 aa17.4■□□□□ 0.38
HOXD11-202ENST00000498438 NT5CQ8TCD5 201 aa17.4■□□□□ 0.38
HOXD11-202ENST00000498438 TM9SF4Q92544 642 aa17.4■□□□□ 0.38
HOXD11-202ENST00000498438 SLAMF7Q9NQ25 335 aa17.4■□□□□ 0.38
HOXD11-202ENST00000498438 IGHV1-45A0A0A0MS14 117 aa17.39■□□□□ 0.37
HOXD11-202ENST00000498438 PCDH17O14917 1159 aa17.39■□□□□ 0.37
HOXD11-202ENST00000498438 TAPBPO15533 448 aa17.39■□□□□ 0.37
HOXD11-202ENST00000498438 GNAZP19086 355 aa17.39■□□□□ 0.37
HOXD11-202ENST00000498438 CDC16Q13042 620 aa17.39■□□□□ 0.37
HOXD11-202ENST00000498438 RBBP5Q15291 538 aaKnown RBP17.39■□□□□ 0.37
HOXD11-202ENST00000498438 MINDY4Q4G0A6 757 aa17.39■□□□□ 0.37
HOXD11-202ENST00000498438 PRR30Q53SZ7 412 aaPredicted RBP17.39■□□□□ 0.37
HOXD11-202ENST00000498438 UBAP2Q5T6F2 1119 aaKnown RBP17.39■□□□□ 0.37
HOXD11-202ENST00000498438 AGAP7PQ5VUJ5 663 aa17.39■□□□□ 0.37
HOXD11-202ENST00000498438 TMEM205Q6UW68 189 aa17.39■□□□□ 0.37
HOXD11-202ENST00000498438 TCAIMQ8N3R3 496 aa17.39■□□□□ 0.37
HOXD11-202ENST00000498438 ZADH2Q8N4Q0 377 aa17.39■□□□□ 0.37
HOXD11-202ENST00000498438 EFCAB3Q8N7B9 438 aa17.39■□□□□ 0.37
HOXD11-202ENST00000498438 EXT2Q93063 718 aa17.39■□□□□ 0.37
HOXD11-202ENST00000498438 KIAA1191Q96A73 305 aa17.39■□□□□ 0.37
HOXD11-202ENST00000498438 MRRFQ96E11 262 aaKnown RBP17.39■□□□□ 0.37
HOXD11-202ENST00000498438 AGAP4Q96P64 663 aa17.39■□□□□ 0.37
HOXD11-202ENST00000498438 RBCK1Q9BYM8 510 aa17.39■□□□□ 0.37
HOXD11-202ENST00000498438 RIC8BQ9NVN3 520 aa17.39■□□□□ 0.37
HOXD11-202ENST00000498438 NINJ2Q9NZG7 142 aa17.39■□□□□ 0.37
HOXD11-202ENST00000498438 CD274Q9NZQ7 290 aa17.39■□□□□ 0.37
HOXD11-202ENST00000498438 MTRF1LQ9UGC7 380 aaKnown RBP17.39■□□□□ 0.37
HOXD11-202ENST00000498438 RNF112Q9ULX5 631 aa17.39■□□□□ 0.37
HOXD11-202ENST00000498438 B3GNT3Q9Y2A9 372 aa17.39■□□□□ 0.37
HOXD11-202ENST00000498438 LOC102723996A0A087X1L8 192 aa17.38■□□□□ 0.37
HOXD11-202ENST00000498438 KIF2AO00139 706 aaPredicted RBP17.38■□□□□ 0.37
HOXD11-202ENST00000498438 GALR3O60755 368 aaPredicted RBP17.38■□□□□ 0.37
HOXD11-202ENST00000498438 B3GALT4O96024 378 aa17.38■□□□□ 0.37
HOXD11-202ENST00000498438 TUBB4AP04350 444 aa17.38■□□□□ 0.37
HOXD11-202ENST00000498438 ZNF888P0CJ79 500 aaPredicted RBP17.38■□□□□ 0.37
HOXD11-202ENST00000498438 C8orf89P0DMQ9 161 aa17.38■□□□□ 0.37
HOXD11-202ENST00000498438 ALOX12P18054 663 aa17.38■□□□□ 0.37
HOXD11-202ENST00000498438 CRABP2P29373 138 aa17.38■□□□□ 0.37
HOXD11-202ENST00000498438 DLG1Q12959 904 aa17.38■□□□□ 0.37
HOXD11-202ENST00000498438 BMPR2Q13873 1038 aa17.38■□□□□ 0.37
HOXD11-202ENST00000498438 PCOLCEQ15113 449 aa17.38■□□□□ 0.37
HOXD11-202ENST00000498438 PLEKHN1Q494U1 663 aaPredicted RBP17.38■□□□□ 0.37
HOXD11-202ENST00000498438 DEFB134Q4QY38 66 aa17.38■□□□□ 0.37
HOXD11-202ENST00000498438 CDKL4Q5MAI5 379 aa17.38■□□□□ 0.37
HOXD11-202ENST00000498438 SULT1C3Q6IMI6 304 aa17.38■□□□□ 0.37
HOXD11-202ENST00000498438 SLCO4C1Q6ZQN7 724 aa17.38■□□□□ 0.37
HOXD11-202ENST00000498438 LANCL3Q6ZV70 420 aa17.38■□□□□ 0.37
HOXD11-202ENST00000498438 TBC1D1Q86TI0 1168 aaPredicted RBP17.38■□□□□ 0.37
HOXD11-202ENST00000498438 ATCAYQ86WG3 371 aa17.38■□□□□ 0.37
HOXD11-202ENST00000498438 KBTBD2Q8IY47 623 aa17.38■□□□□ 0.37
HOXD11-202ENST00000498438 PDPRQ8NCN5 879 aa17.38■□□□□ 0.37
HOXD11-202ENST00000498438 OR5T3Q8NGG3 340 aa17.38■□□□□ 0.37
HOXD11-202ENST00000498438 ZNF700Q9H0M5 742 aa17.38■□□□□ 0.37
HOXD11-202ENST00000498438 ALG9Q9H6U8 611 aa17.38■□□□□ 0.37
HOXD11-202ENST00000498438 CNOT10Q9H9A5 744 aaKnown RBP17.38■□□□□ 0.37
HOXD11-202ENST00000498438 DNAJC11Q9NVH1 559 aa17.38■□□□□ 0.37
HOXD11-202ENST00000498438 SCN2AQ99250 2005 aa17.37■□□□□ 0.37
HOXD11-202ENST00000498438 LRRK2Q5S007 2527 aa17.37■□□□□ 0.37
HOXD11-202ENST00000498438 OR2W5A6NFC9 320 aa17.37■□□□□ 0.37
HOXD11-202ENST00000498438 S100BP04271 92 aaPredicted RBP17.37■□□□□ 0.37
HOXD11-202ENST00000498438 CYC1P08574 325 aa17.37■□□□□ 0.37
HOXD11-202ENST00000498438 PRR35P0CG20 571 aa17.37■□□□□ 0.37
HOXD11-202ENST00000498438 C1GALT1C1LP0DN25 315 aa17.37■□□□□ 0.37
HOXD11-202ENST00000498438 TFEBP19484 476 aa17.37■□□□□ 0.37
HOXD11-202ENST00000498438 PHBP35232 272 aa17.37■□□□□ 0.37
HOXD11-202ENST00000498438 GGT5P36269 586 aa17.37■□□□□ 0.37
HOXD11-202ENST00000498438 HNF4AP41235 474 aa17.37■□□□□ 0.37
HOXD11-202ENST00000498438 HSPA7P48741 367 aa17.37■□□□□ 0.37
HOXD11-202ENST00000498438 HYAL2Q12891 473 aa17.37■□□□□ 0.37
HOXD11-202ENST00000498438 SLBPQ14493 270 aaKnown RBP eCLIP17.37■□□□□ 0.37
HOXD11-202ENST00000498438 INPP5JQ15735 1006 aaPredicted RBP17.37■□□□□ 0.37
HOXD11-202ENST00000498438 UAP1Q16222 522 aaPredicted RBP17.37■□□□□ 0.37
HOXD11-202ENST00000498438 MROH9Q5TGP6 573 aa17.37■□□□□ 0.37
HOXD11-202ENST00000498438 CEP128Q6ZU80 1094 aa17.37■□□□□ 0.37
HOXD11-202ENST00000498438 ABHD13Q7L211 337 aa17.37■□□□□ 0.37
HOXD11-202ENST00000498438 RELL1Q8IUW5 271 aa17.37■□□□□ 0.37
HOXD11-202ENST00000498438 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.37■□□□□ 0.37
HOXD11-202ENST00000498438 TRPV3Q8NET8 790 aa17.37■□□□□ 0.37
HOXD11-202ENST00000498438 UTP15Q8TED0 518 aaKnown RBP17.37■□□□□ 0.37
HOXD11-202ENST00000498438 METTL21AQ8WXB1 218 aa17.37■□□□□ 0.37
HOXD11-202ENST00000498438 IFT81Q8WYA0 676 aa17.37■□□□□ 0.37
HOXD11-202ENST00000498438 ESAMQ96AP7 390 aa17.37■□□□□ 0.37
HOXD11-202ENST00000498438 PEX11GQ96HA9 241 aa17.37■□□□□ 0.37
HOXD11-202ENST00000498438 CYTH2Q99418 400 aa17.37■□□□□ 0.37
HOXD11-202ENST00000498438 WDR77Q9BQA1 342 aaPredicted RBP17.37■□□□□ 0.37
HOXD11-202ENST00000498438 SLC6A16Q9GZN6 736 aa17.37■□□□□ 0.37
HOXD11-202ENST00000498438 ILKAPQ9H0C8 392 aaPredicted RBP17.37■□□□□ 0.37
HOXD11-202ENST00000498438 IGSF5Q9NSI5 407 aa17.37■□□□□ 0.37
HOXD11-202ENST00000498438 GPRC5BQ9NZH0 403 aa17.37■□□□□ 0.37
HOXD11-202ENST00000498438 CSAG2Q9Y5P2 127 aa17.37■□□□□ 0.37
HOXD11-202ENST00000498438 SETXQ7Z333 2677 aaKnown RBP17.37■□□□□ 0.37
HOXD11-202ENST00000498438 PTPN13Q12923 2485 aa17.36■□□□□ 0.37
HOXD11-202ENST00000498438 STK16O75716 305 aa17.36■□□□□ 0.37
HOXD11-202ENST00000498438 CDC123O75794 336 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms