RNA–Protein interactions for RNA: ENST00000497106.5

USP54-215, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 4,773 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-215ENST00000497106 AP4S1Q9Y587 144 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 AGR2O95994 175 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 SOD1P00441 154 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 CFIP05156 583 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 PROS1P07225 676 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 PRR5P85299 388 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 FIGLAQ6QHK4 219 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 GCNT7Q6ZNI0 430 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 RASSF5Q8WWW0 418 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 GAL3ST3Q96A11 431 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 ZFYVE21Q9BQ24 234 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 KLHL4Q9C0H6 718 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 VCX3AQ9NNX9 186 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 KLHL28Q9NXS3 571 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 BTNL2Q9UIR0 455 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 PTPRSQ13332 1948 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 POM121BA6NF01 834 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 LDLRP01130 860 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 KLK1P06870 262 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 ABCB1P08183 1280 aaPredicted RBP8.04□□□□□ -1.12
USP54-215ENST00000497106 CSNK2A2P19784 350 aaPredicted RBP8.04□□□□□ -1.12
USP54-215ENST00000497106 CPN2P22792 545 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 PLIN5Q00G26 463 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 ABHD18Q0P651 414 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 HKDC1Q2TB90 917 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 DEPDC1Q5TB30 811 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 OR4C11Q6IEV9 310 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 FAM83HQ6ZRV2 1179 aaPredicted RBP8.04□□□□□ -1.12
USP54-215ENST00000497106 Q7L0L9 218 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 METTL4Q8N3J2 472 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 DPP10Q8N608 796 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 OR5P2Q8WZ92 322 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 C9orf16Q9BUW7 83 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 TMEM168Q9H0V1 697 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 OR51B5Q9H339 312 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 STX18Q9P2W9 335 aaKnown RBP8.04□□□□□ -1.12
USP54-215ENST00000497106 ENOPH1Q9UHY7 261 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 POMPQ9Y244 141 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 DTNAQ9Y4J8 743 aa8.04□□□□□ -1.12
USP54-215ENST00000497106 A0A1W2PRB8 838 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 C1orf226A1L170 272 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 SCAMP1O15126 338 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 NPPBP16860 134 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 ITGA2P17301 1181 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 KHKP50053 298 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 CSTF1Q05048 431 aaKnown RBP8.03□□□□□ -1.12
USP54-215ENST00000497106 ZNHIT3Q15649 155 aaPredicted RBP8.03□□□□□ -1.12
USP54-215ENST00000497106 FAM129CQ86XR2 697 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 C11orf65Q8NCR3 313 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 RLN3Q8WXF3 142 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 FAM131CQ96AQ9 280 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 MOCOSQ96EN8 888 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 PRO3102Q9H379 93 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 S100A14Q9HCY8 104 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 EXD2Q9NVH0 621 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 PCOLCE2Q9UKZ9 415 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 DHRS12A0PJE2 317 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 OR52A4PA6NMU1 304 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 PIM1P11309 404 aaPredicted RBP8.03□□□□□ -1.12
USP54-215ENST00000497106 MPIP34949 423 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 GCKP35557 465 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 POLE2P56282 527 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 EPS8Q12929 822 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 CATSPEREQ5SY80 951 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 TMEM26Q6ZUK4 368 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 NRROSQ86YC3 692 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 DEFB119Q8N690 84 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 DNAJC9Q8WXX5 260 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 NAT6Q93015 286 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 SLC7A8Q9UHI5 535 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 LILRB5O75023 590 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 T-ENOLP0DO92 83 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 AK4P27144 223 aaPredicted RBP8.03□□□□□ -1.12
USP54-215ENST00000497106 CRATP43155 626 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 FAM214AQ32MH5 1076 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 SPANXN4Q5MJ08 99 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 WLSQ5T9L3 541 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 IYDQ6PHW0 289 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 HPS6Q86YV9 775 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 TMEM126BQ8IUX1 230 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 ABHD11Q8NFV4 315 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 OR2L5Q8NG80 312 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 GPBAR1Q8TDU6 330 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 VPS50Q96JG6 964 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 C3orf30Q96M34 536 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 PPM1MQ96MI6 270 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 SERINC2Q96SA4 455 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 ZNF607Q96SK3 696 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 PELOQ9BRX2 385 aaKnown RBP8.03□□□□□ -1.12
USP54-215ENST00000497106 TEX12Q9BXU0 123 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 CLMPQ9H6B4 373 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 ACTR3BQ9P1U1 418 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 KIF17Q9P2E2 1029 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 MYO9BQ13459 2157 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 NPIPB8E9PQR5 432 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 PPP6CO00743 305 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 IMPDH2P12268 514 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 GM2AP17900 193 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 PLA2G16P53816 162 aa8.03□□□□□ -1.12
USP54-215ENST00000497106 TAS2R50P59544 299 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms