RNA–Protein interactions for RNA: ENST00000496347.1

HDAC4-213, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 995 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-213ENST00000496347 ICE1Q9Y2F5 2266 aa14.87□□□□□ -0.03
HDAC4-213ENST00000496347 SGK494L7N484 410 aa14.86□□□□□ -0.03
HDAC4-213ENST00000496347 LCMT2O60294 686 aaKnown RBP14.86□□□□□ -0.03
HDAC4-213ENST00000496347 RDH16O75452 317 aa14.86□□□□□ -0.03
HDAC4-213ENST00000496347 ICAM2P13598 275 aa14.86□□□□□ -0.03
HDAC4-213ENST00000496347 STMN1P16949 149 aa14.86□□□□□ -0.03
HDAC4-213ENST00000496347 SOX11P35716 441 aa14.86□□□□□ -0.03
HDAC4-213ENST00000496347 TSFMP43897 325 aaKnown RBP14.86□□□□□ -0.03
HDAC4-213ENST00000496347 AGTR2P50052 363 aa14.86□□□□□ -0.03
HDAC4-213ENST00000496347 PLTPP55058 493 aa14.86□□□□□ -0.03
HDAC4-213ENST00000496347 MEF2AQ02078 507 aaPredicted RBP14.86□□□□□ -0.03
HDAC4-213ENST00000496347 ZNF169Q14929 603 aaPredicted RBP14.86□□□□□ -0.03
HDAC4-213ENST00000496347 PCOLCEQ15113 449 aa14.86□□□□□ -0.03
HDAC4-213ENST00000496347 ZKSCAN8Q15776 578 aaPredicted RBP14.86□□□□□ -0.03
HDAC4-213ENST00000496347 CDKL4Q5MAI5 379 aa14.86□□□□□ -0.03
HDAC4-213ENST00000496347 CATSPEREQ5SY80 951 aa14.86□□□□□ -0.03
HDAC4-213ENST00000496347 C3orf62Q6ZUJ4 267 aa14.86□□□□□ -0.03
HDAC4-213ENST00000496347 SNRNP40Q96DI7 357 aaKnown RBP14.86□□□□□ -0.03
HDAC4-213ENST00000496347 MACROD1Q9BQ69 325 aa14.86□□□□□ -0.03
HDAC4-213ENST00000496347 TUBB6Q9BUF5 446 aa14.86□□□□□ -0.03
HDAC4-213ENST00000496347 CNOT10Q9H9A5 744 aaKnown RBP14.86□□□□□ -0.03
HDAC4-213ENST00000496347 NAALAD2Q9Y3Q0 740 aa14.86□□□□□ -0.03
HDAC4-213ENST00000496347 URADA6NGE7 173 aa14.85□□□□□ -0.03
HDAC4-213ENST00000496347 CXorf49A8MYA2 514 aaPredicted RBP14.85□□□□□ -0.03
HDAC4-213ENST00000496347 TCP11X1B4DZS4 312 aa14.85□□□□□ -0.03
HDAC4-213ENST00000496347 GALR3O60755 368 aaPredicted RBP14.85□□□□□ -0.03
HDAC4-213ENST00000496347 PIAS1O75925 651 aa14.85□□□□□ -0.03
HDAC4-213ENST00000496347 C1QAP02745 245 aa14.85□□□□□ -0.03
HDAC4-213ENST00000496347 ALOX12P18054 663 aa14.85□□□□□ -0.03
HDAC4-213ENST00000496347 GNAZP19086 355 aa14.85□□□□□ -0.03
HDAC4-213ENST00000496347 GSTM2P28161 218 aa14.85□□□□□ -0.03
HDAC4-213ENST00000496347 SLC6A12P48065 614 aa14.85□□□□□ -0.03
HDAC4-213ENST00000496347 EFNA3P52797 238 aa14.85□□□□□ -0.03
HDAC4-213ENST00000496347 ATP6V0D1P61421 351 aa14.85□□□□□ -0.03
HDAC4-213ENST00000496347 SRSF1Q07955 248 aaKnown RBP eCLIP14.85□□□□□ -0.03
HDAC4-213ENST00000496347 USP10Q14694 798 aaKnown RBP14.85□□□□□ -0.03
HDAC4-213ENST00000496347 TGFBIQ15582 683 aa14.85□□□□□ -0.03
HDAC4-213ENST00000496347 MFSD4BQ5TF39 518 aa14.85□□□□□ -0.03
HDAC4-213ENST00000496347 FAAH2Q6GMR7 532 aa14.85□□□□□ -0.03
HDAC4-213ENST00000496347 C8orf74Q6P047 294 aa14.85□□□□□ -0.03
HDAC4-213ENST00000496347 NXPE4Q6UWF7 544 aa14.85□□□□□ -0.03
HDAC4-213ENST00000496347 ZDHHC24Q6UX98 284 aa14.85□□□□□ -0.03
HDAC4-213ENST00000496347 TRPV3Q8NET8 790 aa14.85□□□□□ -0.03
HDAC4-213ENST00000496347 BRIX1Q8TDN6 353 aaKnown RBP14.85□□□□□ -0.03
HDAC4-213ENST00000496347 RHBDF1Q96CC6 855 aa14.85□□□□□ -0.03
HDAC4-213ENST00000496347 SEC16BQ96JE7 1060 aa14.85□□□□□ -0.03
HDAC4-213ENST00000496347 CNDP1Q96KN2 507 aa14.85□□□□□ -0.03
HDAC4-213ENST00000496347 BARD1Q99728 777 aaKnown RBP14.85□□□□□ -0.03
HDAC4-213ENST00000496347 RNF32Q9H0A6 362 aa14.85□□□□□ -0.03
HDAC4-213ENST00000496347 SPNS1Q9H2V7 528 aa14.85□□□□□ -0.03
HDAC4-213ENST00000496347 SLC22A14Q9Y267 594 aa14.85□□□□□ -0.03
HDAC4-213ENST00000496347 CSAG2Q9Y5P2 127 aa14.85□□□□□ -0.03
HDAC4-213ENST00000496347 UNC79Q9P2D8 2635 aa14.84□□□□□ -0.03
HDAC4-213ENST00000496347 DYTNA2CJ06 578 aa14.84□□□□□ -0.03
HDAC4-213ENST00000496347 PHGDHO43175 533 aaKnown RBP14.84□□□□□ -0.03
HDAC4-213ENST00000496347 JRKO75564 520 aa14.84□□□□□ -0.03
HDAC4-213ENST00000496347 WDR47O94967 919 aa14.84□□□□□ -0.03
HDAC4-213ENST00000496347 JAK1P23458 1154 aa14.84□□□□□ -0.03
HDAC4-213ENST00000496347 GPX6P59796 221 aa14.84□□□□□ -0.03
HDAC4-213ENST00000496347 RAB10P61026 200 aa14.84□□□□□ -0.03
HDAC4-213ENST00000496347 CDC16Q13042 620 aa14.84□□□□□ -0.03
HDAC4-213ENST00000496347 INAQ16352 499 aa14.84□□□□□ -0.03
HDAC4-213ENST00000496347 FHL5Q5TD97 284 aa14.84□□□□□ -0.03
HDAC4-213ENST00000496347 PLAG1Q6DJT9 500 aa14.84□□□□□ -0.03
HDAC4-213ENST00000496347 LINC00696Q6ZRV3 163 aa14.84□□□□□ -0.03
HDAC4-213ENST00000496347 CPEB2Q7Z5Q1 589 aaKnown RBP14.84□□□□□ -0.03
HDAC4-213ENST00000496347 CCDC25Q86WR0 208 aa14.84□□□□□ -0.03
HDAC4-213ENST00000496347 CTAGE3PQ8IX95 158 aa14.84□□□□□ -0.03
HDAC4-213ENST00000496347 TTLQ8NG68 377 aa14.84□□□□□ -0.03
HDAC4-213ENST00000496347 DNAJB14Q8TBM8 379 aa14.84□□□□□ -0.03
HDAC4-213ENST00000496347 PSMF1Q92530 271 aa14.84□□□□□ -0.03
HDAC4-213ENST00000496347 IMMP1LQ96LU5 166 aa14.84□□□□□ -0.03
HDAC4-213ENST00000496347 SLC6A16Q9GZN6 736 aa14.84□□□□□ -0.03
HDAC4-213ENST00000496347 PITHD1Q9GZP4 211 aaPredicted RBP14.84□□□□□ -0.03
HDAC4-213ENST00000496347 EHD1Q9H4M9 534 aa14.84□□□□□ -0.03
HDAC4-213ENST00000496347 CAB39LQ9H9S4 337 aa14.84□□□□□ -0.03
HDAC4-213ENST00000496347 CLK4Q9HAZ1 481 aaKnown RBP14.84□□□□□ -0.03
HDAC4-213ENST00000496347 AGPAT4Q9NRZ5 378 aa14.84□□□□□ -0.03
HDAC4-213ENST00000496347 ASF1BQ9NVP2 202 aa14.84□□□□□ -0.03
HDAC4-213ENST00000496347 WWOXQ9NZC7 414 aa14.84□□□□□ -0.03
HDAC4-213ENST00000496347 GPRC5BQ9NZH0 403 aa14.84□□□□□ -0.03
HDAC4-213ENST00000496347 MTO1Q9Y2Z2 717 aaKnown RBP14.84□□□□□ -0.03
HDAC4-213ENST00000496347 ZNF860A6NHJ4 632 aa14.83□□□□□ -0.04
HDAC4-213ENST00000496347 SERPIND1P05546 499 aa14.83□□□□□ -0.04
HDAC4-213ENST00000496347 UQCRHP07919 91 aa14.83□□□□□ -0.04
HDAC4-213ENST00000496347 FHP07954 510 aa14.83□□□□□ -0.04
HDAC4-213ENST00000496347 SERPINA6P08185 405 aa14.83□□□□□ -0.04
HDAC4-213ENST00000496347 ZNF888P0CJ79 500 aaPredicted RBP14.83□□□□□ -0.04
HDAC4-213ENST00000496347 CCDC166P0CW27 439 aa14.83□□□□□ -0.04
HDAC4-213ENST00000496347 CD1DP15813 335 aa14.83□□□□□ -0.04
HDAC4-213ENST00000496347 SPRP35270 261 aaPredicted RBP14.83□□□□□ -0.04
HDAC4-213ENST00000496347 MAGEA4P43358 317 aa14.83□□□□□ -0.04
HDAC4-213ENST00000496347 ARG2P78540 354 aa14.83□□□□□ -0.04
HDAC4-213ENST00000496347 SLMAPQ14BN4 828 aa14.83□□□□□ -0.04
HDAC4-213ENST00000496347 ABRAXAS2Q15018 415 aa14.83□□□□□ -0.04
HDAC4-213ENST00000496347 EXT1Q16394 746 aa14.83□□□□□ -0.04
HDAC4-213ENST00000496347 WHAMMP3Q1A5X7 153 aa14.83□□□□□ -0.04
HDAC4-213ENST00000496347 KBTBD12Q3ZCT8 623 aa14.83□□□□□ -0.04
HDAC4-213ENST00000496347 DEFB134Q4QY38 66 aa14.83□□□□□ -0.04
HDAC4-213ENST00000496347 GRTP1Q5TC63 336 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms