RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 SLC19A2O60779 497 aa20.78■□□□□ 0.92
HDDC3-203ENST00000494993 CDC123O75794 336 aaPredicted RBP20.78■□□□□ 0.92
HDDC3-203ENST00000494993 HIST1H2AGP0C0S8 130 aaPredicted RBP20.78■□□□□ 0.92
HDDC3-203ENST00000494993 HIST1H2ADP20671 130 aa20.78■□□□□ 0.92
HDDC3-203ENST00000494993 GABRB3P28472 473 aa20.78■□□□□ 0.92
HDDC3-203ENST00000494993 CD96P40200 585 aa20.78■□□□□ 0.92
HDDC3-203ENST00000494993 ST13P50502 369 aaKnown RBP20.78■□□□□ 0.92
HDDC3-203ENST00000494993 CASP6P55212 293 aa20.78■□□□□ 0.92
HDDC3-203ENST00000494993 CDKN2DP55273 166 aa20.78■□□□□ 0.92
HDDC3-203ENST00000494993 ACTN3Q08043 901 aaPredicted RBP20.78■□□□□ 0.92
HDDC3-203ENST00000494993 USP10Q14694 798 aaKnown RBP20.78■□□□□ 0.92
HDDC3-203ENST00000494993 HERC3Q15034 1050 aa20.78■□□□□ 0.92
HDDC3-203ENST00000494993 OR1C1Q15619 314 aa20.78■□□□□ 0.92
HDDC3-203ENST00000494993 NSDHLQ15738 373 aa20.78■□□□□ 0.92
HDDC3-203ENST00000494993 RBM20Q5T481 1227 aaKnown RBP20.78■□□□□ 0.92
HDDC3-203ENST00000494993 RNASEH2BQ5TBB1 312 aaKnown RBP20.78■□□□□ 0.92
HDDC3-203ENST00000494993 AFAP1L2Q8N4X5 818 aa20.78■□□□□ 0.92
HDDC3-203ENST00000494993 ABHD11Q8NFV4 315 aa20.78■□□□□ 0.92
HDDC3-203ENST00000494993 OR5T3Q8NGG3 340 aa20.78■□□□□ 0.92
HDDC3-203ENST00000494993 GRK7Q8WTQ7 553 aa20.78■□□□□ 0.92
HDDC3-203ENST00000494993 TSLPQ969D9 159 aa20.78■□□□□ 0.92
HDDC3-203ENST00000494993 SCMH1Q96GD3 660 aa20.78■□□□□ 0.92
HDDC3-203ENST00000494993 HIST1H2AHQ96KK5 128 aa20.78■□□□□ 0.92
HDDC3-203ENST00000494993 HIST1H2AJQ99878 128 aa20.78■□□□□ 0.92
HDDC3-203ENST00000494993 H2AFJQ9BTM1 129 aa20.78■□□□□ 0.92
HDDC3-203ENST00000494993 SARGQ9BW04 601 aa20.78■□□□□ 0.92
HDDC3-203ENST00000494993 HES7Q9BYE0 225 aa20.78■□□□□ 0.92
HDDC3-203ENST00000494993 KLHL1Q9NR64 748 aa20.78■□□□□ 0.92
HDDC3-203ENST00000494993 ANKRD10Q9NXR5 420 aa20.78■□□□□ 0.92
HDDC3-203ENST00000494993 FBN2P35556 2912 aa20.77■□□□□ 0.92
HDDC3-203ENST00000494993 MAN1A2O60476 641 aa20.77■□□□□ 0.92
HDDC3-203ENST00000494993 MEF2AQ02078 507 aaPredicted RBP20.77■□□□□ 0.92
HDDC3-203ENST00000494993 ZXDCQ2QGD7 858 aaPredicted RBP20.77■□□□□ 0.92
HDDC3-203ENST00000494993 SLC5A8Q8N695 610 aa20.77■□□□□ 0.92
HDDC3-203ENST00000494993 OR4K1Q8NGD4 311 aa20.77■□□□□ 0.92
HDDC3-203ENST00000494993 ASPDHA6ND91 283 aa20.76■□□□□ 0.91
HDDC3-203ENST00000494993 GABRR3A8MPY1 467 aa20.76■□□□□ 0.91
HDDC3-203ENST00000494993 FAM227AF5H4B4 570 aa20.76■□□□□ 0.91
HDDC3-203ENST00000494993 NDUFS4O43181 175 aa20.76■□□□□ 0.91
HDDC3-203ENST00000494993 TSPAN12O95859 305 aa20.76■□□□□ 0.91
HDDC3-203ENST00000494993 CD46P15529 392 aa20.76■□□□□ 0.91
HDDC3-203ENST00000494993 ELAVL4P26378 380 aaKnown RBP20.76■□□□□ 0.91
HDDC3-203ENST00000494993 HTR1EP28566 365 aa20.76■□□□□ 0.91
HDDC3-203ENST00000494993 EEF1DP29692 281 aaKnown RBP20.76■□□□□ 0.91
HDDC3-203ENST00000494993 FNTAP49354 379 aa20.76■□□□□ 0.91
HDDC3-203ENST00000494993 CCR8P51685 355 aa20.76■□□□□ 0.91
HDDC3-203ENST00000494993 OR4D2P58180 307 aa20.76■□□□□ 0.91
HDDC3-203ENST00000494993 SLC26A5P58743 744 aa20.76■□□□□ 0.91
HDDC3-203ENST00000494993 C3AR1Q16581 482 aa20.76■□□□□ 0.91
HDDC3-203ENST00000494993 ZNF630Q2M218 657 aaPredicted RBP20.76■□□□□ 0.91
HDDC3-203ENST00000494993 DUPD1Q68J44 220 aa20.76■□□□□ 0.91
HDDC3-203ENST00000494993 SPINK14Q6IE38 97 aa20.76■□□□□ 0.91
HDDC3-203ENST00000494993 KIAA0408Q6ZU52 694 aa20.76■□□□□ 0.91
HDDC3-203ENST00000494993 CNTN4Q8IWV2 1026 aa20.76■□□□□ 0.91
HDDC3-203ENST00000494993 TMEM178AQ8NBL3 297 aa20.76■□□□□ 0.91
HDDC3-203ENST00000494993 ZNF740Q8NDX6 193 aa20.76■□□□□ 0.91
HDDC3-203ENST00000494993 OR56A3Q8NH54 315 aa20.76■□□□□ 0.91
HDDC3-203ENST00000494993 THAP3Q8WTV1 239 aaPredicted RBP20.76■□□□□ 0.91
HDDC3-203ENST00000494993 PYCR2Q96C36 320 aa20.76■□□□□ 0.91
HDDC3-203ENST00000494993 SNF8Q96H20 258 aa20.76■□□□□ 0.91
HDDC3-203ENST00000494993 GPR137Q96N19 417 aa20.76■□□□□ 0.91
HDDC3-203ENST00000494993 CHST11Q9NPF2 352 aa20.76■□□□□ 0.91
HDDC3-203ENST00000494993 ARL15Q9NXU5 204 aa20.76■□□□□ 0.91
HDDC3-203ENST00000494993 TEP1Q99973 2627 aaKnown RBP20.76■□□□□ 0.91
HDDC3-203ENST00000494993 PDZD2O15018 2839 aa20.75■□□□□ 0.91
HDDC3-203ENST00000494993 TRBC2A0A5B9 178 aa20.75■□□□□ 0.91
HDDC3-203ENST00000494993 PABPN1LA6NDY0 278 aaKnown RBP20.75■□□□□ 0.91
HDDC3-203ENST00000494993 OR1F1O43749 312 aa20.75■□□□□ 0.91
HDDC3-203ENST00000494993 GALR3O60755 368 aaPredicted RBP20.75■□□□□ 0.91
HDDC3-203ENST00000494993 BANF1O75531 89 aa20.75■□□□□ 0.91
HDDC3-203ENST00000494993 TTC4O95801 387 aa20.75■□□□□ 0.91
HDDC3-203ENST00000494993 MLYCDO95822 493 aa20.75■□□□□ 0.91
HDDC3-203ENST00000494993 AHSGP02765 367 aa20.75■□□□□ 0.91
HDDC3-203ENST00000494993 FHP07954 510 aa20.75■□□□□ 0.91
HDDC3-203ENST00000494993 PTGER4P35408 488 aa20.75■□□□□ 0.91
HDDC3-203ENST00000494993 AP1S2P56377 157 aa20.75■□□□□ 0.91
HDDC3-203ENST00000494993 TAS2R50P59544 299 aa20.75■□□□□ 0.91
HDDC3-203ENST00000494993 IL2P60568 153 aa20.75■□□□□ 0.91
HDDC3-203ENST00000494993 ADORA2A-AS1P86434 159 aa20.75■□□□□ 0.91
HDDC3-203ENST00000494993 ALDH6A1Q02252 535 aaKnown RBP20.75■□□□□ 0.91
HDDC3-203ENST00000494993 PWP1Q13610 501 aa20.75■□□□□ 0.91
HDDC3-203ENST00000494993 KRTCAP3Q53RY4 240 aa20.75■□□□□ 0.91
HDDC3-203ENST00000494993 SPANXN3Q5MJ09 141 aa20.75■□□□□ 0.91
HDDC3-203ENST00000494993 XKRXQ6PP77 449 aa20.75■□□□□ 0.91
HDDC3-203ENST00000494993 LGI4Q8N135 537 aa20.75■□□□□ 0.91
HDDC3-203ENST00000494993 TBC1D20Q96BZ9 403 aa20.75■□□□□ 0.91
HDDC3-203ENST00000494993 MAGED4Q96JG8 741 aa20.75■□□□□ 0.91
HDDC3-203ENST00000494993 FRMD6Q96NE9 622 aa20.75■□□□□ 0.91
HDDC3-203ENST00000494993 OR4K3Q96R72 315 aa20.75■□□□□ 0.91
HDDC3-203ENST00000494993 TINAGQ9UJW2 476 aa20.75■□□□□ 0.91
HDDC3-203ENST00000494993 ZNF835Q9Y2P0 537 aa20.75■□□□□ 0.91
HDDC3-203ENST00000494993 OTOGQ6ZRI0 2925 aa20.74■□□□□ 0.91
HDDC3-203ENST00000494993 ESRRAP11474 423 aaPredicted RBP20.74■□□□□ 0.91
HDDC3-203ENST00000494993 ALOX12P18054 663 aa20.74■□□□□ 0.91
HDDC3-203ENST00000494993 JAK1P23458 1154 aa20.74■□□□□ 0.91
HDDC3-203ENST00000494993 SKP1P63208 163 aa20.74■□□□□ 0.91
HDDC3-203ENST00000494993 OC90Q02509 493 aaPredicted RBP20.74■□□□□ 0.91
HDDC3-203ENST00000494993 PDAP1Q13442 181 aaKnown RBP20.74■□□□□ 0.91
HDDC3-203ENST00000494993 PPP1R7Q15435 360 aa20.74■□□□□ 0.91
HDDC3-203ENST00000494993 DEFB134Q4QY38 66 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms