RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 RGMAQ96B86 450 aa10.54□□□□□ -0.72
PKP4-215ENST00000494945 SLC7A6OSQ96CW6 309 aaPredicted RBP10.54□□□□□ -0.72
PKP4-215ENST00000494945 AHCYL2Q96HN2 611 aaKnown RBP10.54□□□□□ -0.72
PKP4-215ENST00000494945 QRFPRQ96P65 431 aa10.54□□□□□ -0.72
PKP4-215ENST00000494945 TRAPPC9Q96Q05 1148 aa10.54□□□□□ -0.72
PKP4-215ENST00000494945 PRRX2Q99811 253 aa10.54□□□□□ -0.72
PKP4-215ENST00000494945 ZFYVE21Q9BQ24 234 aa10.54□□□□□ -0.72
PKP4-215ENST00000494945 GTPBP2Q9BX10 602 aaKnown RBP10.54□□□□□ -0.72
PKP4-215ENST00000494945 CHRNA10Q9GZZ6 450 aa10.54□□□□□ -0.72
PKP4-215ENST00000494945 ACTL8Q9H568 366 aa10.54□□□□□ -0.72
PKP4-215ENST00000494945 EFCAB1Q9HAE3 211 aa10.54□□□□□ -0.72
PKP4-215ENST00000494945 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.54□□□□□ -0.72
PKP4-215ENST00000494945 MCM8Q9UJA3 840 aa10.54□□□□□ -0.72
PKP4-215ENST00000494945 ADAM29Q9UKF5 820 aa10.54□□□□□ -0.72
PKP4-215ENST00000494945 PILRAQ9UKJ1 303 aa10.54□□□□□ -0.72
PKP4-215ENST00000494945 DLGAP4Q9Y2H0 992 aa10.54□□□□□ -0.72
PKP4-215ENST00000494945 KLHL20Q9Y2M5 609 aa10.54□□□□□ -0.72
PKP4-215ENST00000494945 PCDHGB2Q9Y5G2 931 aa10.54□□□□□ -0.72
PKP4-215ENST00000494945 CACNA1HO95180 2353 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 LRIT2A6NDA9 550 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 NR5A2O00482 541 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 CAPN5O15484 640 aaPredicted RBP10.53□□□□□ -0.72
PKP4-215ENST00000494945 SIGLEC6O43699 453 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 CTSVO60911 334 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 SH3BGRLO75368 114 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 DNAJC8O75937 253 aaPredicted RBP10.53□□□□□ -0.72
PKP4-215ENST00000494945 SERPIND1P05546 499 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 ANXA4P09525 319 aaPredicted RBP10.53□□□□□ -0.72
PKP4-215ENST00000494945 SLC35G6P0C7Q6 338 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 PVRP15151 417 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 ST6GAL1P15907 406 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 PRPS1L1P21108 318 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 ALDH4A1P30038 563 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 HNRNPH1P31943 449 aaKnown RBP10.53□□□□□ -0.72
PKP4-215ENST00000494945 GSTM5P46439 218 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 ZFP36L2P47974 494 aaKnown RBP10.53□□□□□ -0.72
PKP4-215ENST00000494945 CPA2P48052 419 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 PPM1FP49593 454 aaPredicted RBP10.53□□□□□ -0.72
PKP4-215ENST00000494945 RAP1GDS1P52306 607 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 ATXN3P54252 364 aaPredicted RBP10.53□□□□□ -0.72
PKP4-215ENST00000494945 OR1D5P58170 312 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 C21orf58P58505 322 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 STXBP1P61764 594 aaKnown RBP10.53□□□□□ -0.72
PKP4-215ENST00000494945 MXRA7P84157 204 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 ACTN3Q08043 901 aaPredicted RBP10.53□□□□□ -0.72
PKP4-215ENST00000494945 RGS1Q08116 209 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 TGM3Q08188 693 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 CYP4F3Q08477 520 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 ZNF763Q0D2J5 394 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 SUZ12Q15022 739 aaKnown RBP10.53□□□□□ -0.72
PKP4-215ENST00000494945 INAVAQ3KP66 663 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 FBXO42Q6P3S6 717 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 PAGE2Q7Z2X7 111 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 COMMD6Q7Z4G1 85 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 ASPGQ86U10 573 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 PLXDC1Q8IUK5 500 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 MINDY1Q8N5J2 469 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 EID2Q8N6I1 236 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 ZNF655Q8N720 491 aaPredicted RBP10.53□□□□□ -0.72
PKP4-215ENST00000494945 C19orf47Q8N9M1 422 aaKnown RBP10.53□□□□□ -0.72
PKP4-215ENST00000494945 NAT6Q93015 286 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 RERGQ96A58 199 aaPredicted RBP10.53□□□□□ -0.72
PKP4-215ENST00000494945 KLHL29Q96CT2 875 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 TM4SF19Q96DZ7 209 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 SPDL1Q96EA4 605 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 TCTN2Q96GX1 697 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 OR2A5Q96R48 311 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 F2RL3Q96RI0 385 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 BTBD10Q9BSF8 475 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 COL25A1Q9BXS0 654 aaPredicted RBP10.53□□□□□ -0.72
PKP4-215ENST00000494945 EBPLQ9BY08 206 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 SLC6A16Q9GZN6 736 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 NDE1Q9NXR1 346 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 WBP11Q9Y2W2 641 aaKnown RBP10.53□□□□□ -0.72
PKP4-215ENST00000494945 NDUFAF1Q9Y375 327 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 MN1Q10571 1320 aaPredicted RBP10.53□□□□□ -0.72
PKP4-215ENST00000494945 FER1L5A0AVI2 2057 aa10.53□□□□□ -0.72
PKP4-215ENST00000494945 LY6G6EA0A0G2JKS1 128 aa10.52□□□□□ -0.73
PKP4-215ENST00000494945 A0A0J9YVX5 310 aa10.52□□□□□ -0.73
PKP4-215ENST00000494945 A0A1W2PP18 115 aa10.52□□□□□ -0.73
PKP4-215ENST00000494945 GNG14A0A1W2PPG7 69 aa10.52□□□□□ -0.73
PKP4-215ENST00000494945 EME2A4GXA9 379 aaPredicted RBP10.52□□□□□ -0.73
PKP4-215ENST00000494945 CFAP73A6NFT4 308 aa10.52□□□□□ -0.73
PKP4-215ENST00000494945 URADA6NGE7 173 aa10.52□□□□□ -0.73
PKP4-215ENST00000494945 CCDC154A6NI56 674 aa10.52□□□□□ -0.73
PKP4-215ENST00000494945 SAP18O00422 153 aaKnown RBP10.52□□□□□ -0.73
PKP4-215ENST00000494945 PLPP1O14494 284 aa10.52□□□□□ -0.73
PKP4-215ENST00000494945 ANGPT2O15123 496 aa10.52□□□□□ -0.73
PKP4-215ENST00000494945 GYG2O15488 501 aa10.52□□□□□ -0.73
PKP4-215ENST00000494945 CFLARO15519 480 aa10.52□□□□□ -0.73
PKP4-215ENST00000494945 MAP3K7O43318 606 aa10.52□□□□□ -0.73
PKP4-215ENST00000494945 B4GAT1O43505 415 aa10.52□□□□□ -0.73
PKP4-215ENST00000494945 C9P02748 559 aa10.52□□□□□ -0.73
PKP4-215ENST00000494945 IL6P05231 212 aa10.52□□□□□ -0.73
PKP4-215ENST00000494945 RETP07949 1114 aa10.52□□□□□ -0.73
PKP4-215ENST00000494945 HOXB3P14651 431 aaPredicted RBP10.52□□□□□ -0.73
PKP4-215ENST00000494945 CD1EP15812 388 aa10.52□□□□□ -0.73
PKP4-215ENST00000494945 TACR1P25103 407 aa10.52□□□□□ -0.73
PKP4-215ENST00000494945 TSFMP43897 325 aaKnown RBP10.52□□□□□ -0.73
PKP4-215ENST00000494945 DUSP3P51452 185 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms